FC931838

Overview
NameFC931838
Unique NameFC931838
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 304.679 bits (779), Expect = 3.117e-82
Identity = 153/193 (79.27%), Postives = 174/193 (90.16%), Query Frame = 3
Query:   87 SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            S REENVYMAKLAEQAERYEEMV++MEKV  +    EEL+VEERNLLSVAYKNVIGARRASWRI+SSIEQ+EES+GN+DHV++IK+YR KIE+EL++IC GIL +L+  L+P+A+ A+SKVFYLKMKGDYHRYLAEFK G ERK AAE+TL AYKSA DIA AELAPTHPIRLGLALNFSVFYYEILNSPDRA
Sbjct:    2 STREENVYMAKLAEQAERYEEMVEFMEKVAKTVDV-EELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNEDHVAIIKDYRGKIESELSKICDGILNVLEAHLIPSASPAESKVFYLKMKGDYHRYLAEFKAGAERKEAAESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRA 193          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 304.679 bits (779), Expect = 3.117e-82
Identity = 157/196 (80.10%), Postives = 175/196 (89.29%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            REENVYMAKLAEQAERYEEMV++MEKV  +  + EELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN+D V++IK+YR KIE ELT+IC GILKLL+  LVP++ A +SKVFYLKMKGDY+RYLAEFKTG ERK AAENT+ AYK+AQDIA AEL PTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDS-EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRA---CN 200          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.117e-82
Identity = 156/196 (79.59%), Postives = 175/196 (89.29%), Query Frame = 3
Query:   78 AAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            +A   REENVYMAKLAEQAERYEEMV++MEKV  +  + EELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EE RGN+D V++IK+YR KIE ELT+IC GILKLL+  LVP++ A +SKVFYLKMKGDY+RYLAEFKTG ERK AAENT+ AYK+AQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRA
Sbjct:    3 SAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDS-EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLETHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRA 197          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.317e-82
Identity = 157/199 (78.89%), Postives = 177/199 (88.94%), Query Frame = 3
Query:   75 MAAPSP--REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            MA P+   REENVYMAKLAEQAERYEEMV++MEKV  +  + EELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN+D V++IK+YR KIE ELT+IC GILKLLD  LVP++ A +SKVFYLKMKGDY+RYLAEFK+G ERK AAENT+ AYK+AQ+IA AEL PTHPIRLGLALNFSVFYYEILNSPDRA
Sbjct:    1 MAQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDS-EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRA 198          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.317e-82
Identity = 157/196 (80.10%), Postives = 174/196 (88.78%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            REENVYMAKLAEQAERYEEMV++MEKV  +  + EELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN+D  ++IKEYR KIE EL++IC GILKLLD  LVP++ A +SKVFYLKMKGDY+RYLAEFKTG ERK AAENT+ AYK+AQDIA AEL PTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDS-EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRA---CN 200          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.069e-82
Identity = 150/202 (74.26%), Postives = 179/202 (88.61%), Query Frame = 3
Query:   75 MAAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            MAA   R++ VYMAKLAEQAERYEEMVQ+ME++V  A+  EELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQ+EESR N +HVS++K+YRSK+E+EL+ +C GILKLLD  L+P+A A++SKVFYLKMKGDYHRY+AEFK+GDERK AAE+T+ AYK+AQDIA A++APTHPIRLGLALNFSVFYYEILNS D+A   CN
Sbjct:    1 MAATLGRDQYVYMAKLAEQAERYEEMVQFMEQLVTGATPAEELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDEHVSLVKDYRSKVESELSSVCSGILKLLDSHLIPSAGASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKA---CN 199          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 2.918e-80
Identity = 146/197 (74.11%), Postives = 176/197 (89.34%), Query Frame = 3
Query:   75 MAAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            MA    R++ VYMAKLAEQAERYEEMVQ+ME++V+ A+   ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQ+EESR N++HVS++K+YRSK+E EL+ IC GIL+LLD  L+P+A A++SKVFYLKMKGDYHRYLAEFK+GDERK AAE+T+ AYK+AQD+A A+LAPTHPIRLGLALNFSVFYYEILNS ++A
Sbjct:    1 MATTLSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKA 197          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 8.489e-80
Identity = 153/198 (77.27%), Postives = 171/198 (86.36%), Query Frame = 3
Query:   78 AAPSPREENVYMAKLAEQAERYEEMVQYMEKVV--ASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            A    REE VYMAKLAEQAERYEEMV++MEKVV  A+A  G ELTVEERNLLSVAYKNVIGARRASWRIVSSIEQ+EE RG   H +  + YR+++EAEL+ IC GIL+LLD++LVPAAAA D+KVFYLKMKGDYHRYLAEFKTG ERK AA+ TL AY++AQDIA  EL+PTHPIRLGLALNFSVFYYEILNSPDRA
Sbjct:    5 AGGGTREEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRA 202          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.957e-76
Identity = 138/191 (72.25%), Postives = 166/191 (86.91%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE+ VY+A ++EQAERYEEMV++M+KVV  ++   ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQ+EE R N DHVS++K YRSK+E ELT++C  IL LLD  LVP+A+A++SKVFYLKMKGDYHRYLAEFK GDERK A E+T+ +YK+AQDIA+A+L PTHPIRLGLALNFSVFYYEILN  D+A
Sbjct:    6 REQYVYLANVSEQAERYEEMVEFMQKVVVGSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDDHVSLVKHYRSKVENELTQVCATILSLLDSNLVPSASASESKVFYLKMKGDYHRYLAEFKVGDERKTATEDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFYYEILNQSDKA 196          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.360e-76
Identity = 142/199 (71.36%), Postives = 176/199 (88.44%), Query Frame = 3
Query:   75 MAAPS--PREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            MA P    RE+ +Y+AKLAEQAERYEEMV++M+++VA  S   ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQ+EE R N++HV ++K+YRSK+E+EL+++C GILK+LDQ L+P+AAA +SKVFYLKMKGDY+RYLAEFK G+ERK AAE+T+ AYK+AQDIA AELAPTHPIRLGLALN+SVFYYEILN+ ++A
Sbjct:    1 MAVPENLTREQCLYLAKLAEQAERYEEMVKFMDRLVA-VSASSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSAAAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIALAELAPTHPIRLGLALNYSVFYYEILNASEKA 198          
The following BLAST results are available for this feature:
BLAST of FC931838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
14333_ARATH3.117e-8279.2714-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14332_ORYSJ3.117e-8280.1014-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
14331_MAIZE3.117e-8279.5914-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
1433B_HORVU5.317e-8278.8914-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14335_ORYSJ5.317e-8280.1014-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
14336_ARATH9.069e-8274.2614-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
14338_ARATH2.918e-8074.1114-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14331_ORYSJ8.489e-8077.2714-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
1433B_SOYBN1.957e-7672.2514-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
1433D_TOBAC4.360e-7671.3614-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionC34201G03EF PostHarveN Citrus clementina cDNA clone C34201G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931838 ID=FC931838; Name=FC931838; organism=Citrus clementina; type=EST; length=699bp
GATCAATTCCAAATCGCCCACAAAATCTCCAAAAGAAAACCGAAAGAAAG
AAACAAACACAACTGAACGGAACAATGGCAGCCCCTTCTCCACGGGAAGA
AAACGTATACATGGCGAAACTTGCGGAGCAAGCCGAGCGGTACGAGGAGA
TGGTCCAATACATGGAAAAAGTCGTCGCCTCCGCCTCAACCGGCGAGGAA
CTCACCGTCGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTCAT
CGGCGCACGCCGCGCCTCCTGGCGCATCGTGTCCTCCATCGAGCAGGAGG
AGGAGTCGCGAGGCAACCAGGACCATGTCTCCGTGATTAAGGAGTACAGA
TCGAAGATCGAGGCCGAGTTGACGGAGATCTGTGGCGGGATCTTGAAATT
ATTGGACCAGAAATTGGTTCCCGCCGCTGCCGCTGCCGATTCCAAGGTGT
TTTATTTGAAGATGAAGGGAGATTATCATAGGTACTTGGCCGAGTTTAAG
ACTGGCGATGAGAGGAAAGTCGCCGCTGAGAATACTCTTAATGCCTATAA
ATCTGCTCAGGATATTGCAAATGCTGAACTGGCGCCAACTCATCCTATCC
GGCTAGGACTGGCTCTGAACTTCTCTGTGTTTTACTATGAGATTTTGAAC
TCTCCCGATAGAGCCTGGTACCCTTGCAACAGGCCTTTGATGAAGCATC
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