FC931838

Overview
NameFC931838
Unique NameFC931838
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 7.437e-76
Identity = 137/191 (71.73%), Postives = 170/191 (89.01%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE+ +Y+AKLAEQAERYEEMVQ+M+K+V +++   ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQ+EESR N++HV ++KEYR K+E EL+++C GILKLL+  LVP+A  ++SKVFYLKMKGDY+RYLAEFK GDERK AAE+T+N+YK+AQ+IA  +L PTHPIRLGLALNFSVFY+EILNS D+A
Sbjct:   11 REQCLYLAKLAEQAERYEEMVQFMDKLVLNSTPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVHLVKEYRGKVENELSQVCAGILKLLESNLVPSATTSESKVFYLKMKGDYYRYLAEFKIGDERKQAAEDTMNSYKAAQEIALTDLPPTHPIRLGLALNFSVFYFEILNSSDKA 201          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 2.826e-75
Identity = 141/199 (70.85%), Postives = 175/199 (87.94%), Query Frame = 3
Query:   75 MAAPS--PREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            MA P    RE+ +Y+AKLAEQAERYEEMV++M+K+V  + + E LTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQ+EE R N +HV ++K+YRSK+E+EL+++C GILK+LDQ L+P+A+A +SKVFYLKMKGDY+RYLAEFK G+ERK AAE+T+ AYK+AQDIA AELAPTHPIRLGLALNFSVFYYEILN+ ++A
Sbjct:    1 MALPENLTREQCLYLAKLAEQAERYEEMVKFMDKLVIGSGSSE-LTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSASAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIAVAELAPTHPIRLGLALNFSVFYYEILNASEKA 198          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.329e-74
Identity = 140/191 (73.30%), Postives = 166/191 (86.91%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            REE VYMAKLAEQAERY+EMV+ M+KV A     +EL+VEERNLLSVAYKNVIGARRASWRI+SSIEQ+EE++GN++HV  I++YR+ +E EL++IC  IL+LLD  L+P A+  +SKVFYLKMKGDYHRYLAEFKTG +RK AAE+TL AYK+AQDIA  +L PTHPIRLGLALNFSVFYYEILNSP+RA
Sbjct:    5 REECVYMAKLAEQAERYDEMVEEMKKV-AKLVHDQELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEEAKGNEEHVQRIRKYRTVVEEELSKICASILQLLDDHLIPTASTGESKVFYLKMKGDYHRYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFYYEILNSPERA 194          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 2.645e-73
Identity = 142/196 (72.45%), Postives = 165/196 (84.18%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            REENVYMAKLAEQAERYEEMV+ M+KV   A    ELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EES+GN++HV  IKEY+ K+E ELT+IC  IL++L+  L+ ++A+ +SKVFY KMKGDY RYLAEF TG+ RK +AE++L AYK+A DIA  EL PTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    3 REENVYMAKLAEQAERYEEMVEAMKKV---AELDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNENHVKKIKEYKCKVEKELTDICNDILEVLESHLIVSSASGESKVFYYKMKGDYFRYLAEFATGNPRKTSAESSLIAYKAASDIAVTELPPTHPIRLGLALNFSVFYYEILNSPDRA---CN 192          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.451e-71
Identity = 139/193 (72.02%), Postives = 162/193 (83.94%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWY 671
            RE+ VY+AKLAEQAERYE MV+ M+ V   AST +ELTVEERNLLSVAYKNVIGARRASWRIVSSIEQ+EES+GN   V +IKEYR KIE EL  IC  IL +L++ L+P AA+A+SKVFY KMKGDY+RYLAEF  G++R+ +A+ +L  YK+A +IA AELAPTHPIRLGLALNFSVFYYEILNSPDRA Y
Sbjct:    6 REDAVYLAKLAEQAERYEGMVENMKSV---ASTDQELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACY 195          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 268.855 bits (686), Expect = 1.895e-71
Identity = 135/194 (69.59%), Postives = 165/194 (85.05%), Query Frame = 3
Query:   84 PSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            P+ RE++VY+AKLAEQAERYEEMV+ M+ V   AS+G+EL+VEERNLLSVAYKNVIGARRASWRIVSSIEQ+EE++GN+  V++I++YR+KIEAEL++IC  IL +L   L+ +A   +SKVFY KMKGDYHRYLAEF   ++RK AA+ +L AYK+A D+A  EL PTHPIRLGLALNFSVFYYEILNSPDRA
Sbjct:    2 PASREDSVYLAKLAEQAERYEEMVENMKAV---ASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEAKGNESQVALIRDYRAKIEAELSKICEDILSVLSDHLITSAQTGESKVFYYKMKGDYHRYLAEFAIAEKRKEAADLSLEAYKAASDVAVTELPPTHPIRLGLALNFSVFYYEILNSPDRA 192          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433E_SHEEP (14-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 9.407e-71
Identity = 137/191 (71.73%), Postives = 158/191 (82.72%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE+ VY AKLAEQAERY+EMV+ M+KV   A    ELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EE++G +D + +I+EYR  +E EL  IC  IL +LD+ L+PAA   +SKVFY KMKGDYHRYLAEF TG++RK AAEN+L AYK+A DIA  EL PTHPIRLGLALNFSVFYYEILNSPDRA
Sbjct:    4 REDLVYQAKLAEQAERYDEMVESMKKV---AGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRA 191          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433E_RAT (14-3-3 protein epsilon OS=Rattus norvegicus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 9.407e-71
Identity = 137/191 (71.73%), Postives = 158/191 (82.72%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE+ VY AKLAEQAERY+EMV+ M+KV   A    ELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EE++G +D + +I+EYR  +E EL  IC  IL +LD+ L+PAA   +SKVFY KMKGDYHRYLAEF TG++RK AAEN+L AYK+A DIA  EL PTHPIRLGLALNFSVFYYEILNSPDRA
Sbjct:    4 REDLVYQAKLAEQAERYDEMVESMKKV---AGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRA 191          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433E_MOUSE (14-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 9.407e-71
Identity = 137/191 (71.73%), Postives = 158/191 (82.72%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE+ VY AKLAEQAERY+EMV+ M+KV   A    ELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EE++G +D + +I+EYR  +E EL  IC  IL +LD+ L+PAA   +SKVFY KMKGDYHRYLAEF TG++RK AAEN+L AYK+A DIA  EL PTHPIRLGLALNFSVFYYEILNSPDRA
Sbjct:    4 REDLVYQAKLAEQAERYDEMVESMKKV---AGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRA 191          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433E_HUMAN (14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 9.407e-71
Identity = 137/191 (71.73%), Postives = 158/191 (82.72%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE+ VY AKLAEQAERY+EMV+ M+KV   A    ELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EE++G +D + +I+EYR  +E EL  IC  IL +LD+ L+PAA   +SKVFY KMKGDYHRYLAEF TG++RK AAEN+L AYK+A DIA  EL PTHPIRLGLALNFSVFYYEILNSPDRA
Sbjct:    4 REDLVYQAKLAEQAERYDEMVESMKKV---AGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRA 191          
The following BLAST results are available for this feature:
BLAST of FC931838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
14310_SOLLC7.437e-7671.7314-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
14331_SOLLC2.826e-7570.8514-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
1433_CHLRE5.329e-7473.3014-3-3-like protein OS=Chlamydomonas reinhardtii P... [more]
1433_DICDI2.645e-7372.4514-3-3-like protein OS=Dictyostelium discoideum GN... [more]
RAD24_SCHPO1.451e-7172.02DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
1433_CANAL1.895e-7169.5914-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
1433E_SHEEP9.407e-7171.7314-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1... [more]
1433E_RAT9.407e-7171.7314-3-3 protein epsilon OS=Rattus norvegicus GN=Ywh... [more]
1433E_MOUSE9.407e-7171.7314-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE... [more]
1433E_HUMAN9.407e-7171.7314-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34201G03EF PostHarveN Citrus clementina cDNA clone C34201G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931838 ID=FC931838; Name=FC931838; organism=Citrus clementina; type=EST; length=699bp
GATCAATTCCAAATCGCCCACAAAATCTCCAAAAGAAAACCGAAAGAAAG
AAACAAACACAACTGAACGGAACAATGGCAGCCCCTTCTCCACGGGAAGA
AAACGTATACATGGCGAAACTTGCGGAGCAAGCCGAGCGGTACGAGGAGA
TGGTCCAATACATGGAAAAAGTCGTCGCCTCCGCCTCAACCGGCGAGGAA
CTCACCGTCGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTCAT
CGGCGCACGCCGCGCCTCCTGGCGCATCGTGTCCTCCATCGAGCAGGAGG
AGGAGTCGCGAGGCAACCAGGACCATGTCTCCGTGATTAAGGAGTACAGA
TCGAAGATCGAGGCCGAGTTGACGGAGATCTGTGGCGGGATCTTGAAATT
ATTGGACCAGAAATTGGTTCCCGCCGCTGCCGCTGCCGATTCCAAGGTGT
TTTATTTGAAGATGAAGGGAGATTATCATAGGTACTTGGCCGAGTTTAAG
ACTGGCGATGAGAGGAAAGTCGCCGCTGAGAATACTCTTAATGCCTATAA
ATCTGCTCAGGATATTGCAAATGCTGAACTGGCGCCAACTCATCCTATCC
GGCTAGGACTGGCTCTGAACTTCTCTGTGTTTTACTATGAGATTTTGAAC
TCTCCCGATAGAGCCTGGTACCCTTGCAACAGGCCTTTGATGAAGCATC
back to top