FC931838

Overview
NameFC931838
Unique NameFC931838
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.699e-67
Identity = 129/191 (67.54%), Postives = 158/191 (82.72%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE +VY+AKLAEQAERYEEMV+ M+KV  S    ++L+VEERNLLSVAYKN+IGARRASWRI+SSIEQ+EESRGN    ++IKEYR KIE EL++IC  +L +L++ L+PAA   +SKVFY KMKGDY+RYLAEF  G+  K AA+++L AYK+A DIA AEL PT P+RLGLALNFSVFYYEIL+SP+ A
Sbjct:    5 RENSVYLAKLAEQAERYEEMVENMKKVACS---NDKLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESA 192          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.310e-67
Identity = 128/197 (64.97%), Postives = 160/197 (81.22%), Query Frame = 3
Query:   75 MAAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            MA+   RE  VY+AKLAEQAERYEEMV+ M+ V   A+   ELTVEERNLLSV YKNV+GARRASWRI+SSIEQ+EE++GN   V  IKEYR K+E+EL+ IC  I+ ++D+ L+P++++ +  VF+ KMKGDY+RYLAEFK+GDERK AA++++ AY+ A   A AELA THPIRLGLALNFSVFYYEILNSP+RA
Sbjct:    1 MASTKERENFVYVAKLAEQAERYEEMVEAMKNV---ANLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRLKVESELSNICSDIMTVIDEYLIPSSSSGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQLASTTAEAELASTHPIRLGLALNFSVFYYEILNSPERA 194          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 1.406e-66
Identity = 125/191 (65.45%), Postives = 158/191 (82.72%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE+ VY+A+LAEQAERY+EMV+ M+ +   A    ELTVEERNL+SV YKNVIGARRASWRI+SSIEQ+EES+G++ +V  IK YR ++E ELT+IC  IL ++D+ LVP++   +S VFY KMKGDY+RYLAEFK GD+RK A+E +L AY++A   A+++LAPTHPIRLGLALNFSVFYYEILNSP+RA
Sbjct:    5 REKQVYLARLAEQAERYDEMVEAMKAI---AKMDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEESKGHEQNVKRIKTYRQRVEDELTKICSDILSVIDEHLVPSSTTGESTVFYYKMKGDYYRYLAEFKAGDDRKEASEQSLKAYEAATATASSDLAPTHPIRLGLALNFSVFYYEILNSPERA 192          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.112e-66
Identity = 128/191 (67.02%), Postives = 151/191 (79.06%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE  VYMAKL+EQAERY+EMV+ M+KV   A    ELTVEERNLLSV YKNVIGARRASWRI+SSIEQ+EES+GN+ +V  IK YR K+E EL  IC  IL ++DQ L+P A + ++ VFY KMKGDY+RYLAEFKT  ERK AAE +L  Y++A   A+ EL  THPIRLGLALNFSVFYYEI+NSP+RA
Sbjct:   10 RETFVYMAKLSEQAERYDEMVETMKKV---ARVNSELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNVKQIKGYRQKVEDELANICQDILTIIDQHLIPHATSGEATVFYYKMKGDYYRYLAEFKTEQERKEAAEQSLKGYEAATQAASTELPSTHPIRLGLALNFSVFYYEIMNSPERA 197          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 3.462e-65
Identity = 123/197 (62.44%), Postives = 158/197 (80.20%), Query Frame = 3
Query:   75 MAAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            MA+   RE  VY+A+LAEQAERY+EMV  M+ V   A+   ELTVEERNLLSV YKNV+G+RRASWRI+SSIEQ+E++RGN+ +V  I+ YR K+E+ELT+IC  I+ ++D+ L+P+  A +S VFY KMKGDY+RYLAEFKTGD++K  ++ +L AY++A   A AEL  THPIRLGLALNFSVFYYEI+NSP+RA
Sbjct:    1 MASSKERESLVYIARLAEQAERYDEMVDAMKNV---ANLDVELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEDARGNEQNVKRIQGYRQKVESELTDICNNIMTVIDEHLIPSCTAGESTVFYYKMKGDYYRYLAEFKTGDDKKEVSDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFYYEIMNSPERA 194          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.828e-64
Identity = 125/197 (63.45%), Postives = 158/197 (80.20%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCNR 683
            R + VY+AKL EQAERY+EMV+ M+KV   A+   ELT+EERNLLSV YKNVIGARRASWRI+SSIEQ+EES+GN+ +   IK+YR+K+E EL++IC  IL ++D+ LVP A + +S VFY KMKGDY RYLAEFK+G +R+ AA+ +L AY++A   A+ EL+ THPIRLGLALNFSVFYYEILNSP+RA +   R
Sbjct:    5 RAKQVYLAKLNEQAERYDEMVEAMKKV---AALDVELTIEERNLLSVGYKNVIGARRASWRILSSIEQKEESKGNEQNAKRIKDYRTKVEEELSKICYDILAVIDKHLVPFATSGESTVFYYKMKGDYFRYLAEFKSGADREEAADLSLKAYEAATSSASTELSTTHPIRLGLALNFSVFYYEILNSPERACHLAKR 198          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.528e-64
Identity = 121/191 (63.35%), Postives = 153/191 (80.10%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE+ VY+AKL+EQ ERY+EMV+ M+KV   A    ELTVEERNL+SV YKNVIGARRASWRI+SSIEQ+EES+GN ++V  +K YR ++E EL ++C  IL ++D+ L+P++ A +S VF+ KMKGDY+RYLAEF +G ERK AA+ +L AYK+A   A   LAPTHP+RLGLALNFSVFYYEILNSP+ A
Sbjct:    5 REKQVYLAKLSEQTERYDEMVEAMKKV---AQLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEESKGNDENVKRLKNYRKRVEDELAKVCNDILSVIDKHLIPSSNAVESTVFFYKMKGDYYRYLAEFSSGAERKEAADQSLEAYKAAVAAAENGLAPTHPVRLGLALNFSVFYYEILNSPESA 192          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433_FUCVE (14-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.481e-63
Identity = 121/191 (63.35%), Postives = 155/191 (81.15%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            R++ VYMAKLAEQAER++EMV +M+ V   A   +EL+VEERNLLSVAYKNVIG+RRASWR++SSIE ++      D + +I++Y+SKIE ELT+IC  ILK+++ +L+P + + + KVFY KMKGDYHRYLAEF++ DERK +A + L+AY+ A D AN +L PTHPIRLGLALNFSVFYYEILNSPDRA
Sbjct:    4 RDDLVYMAKLAEQAERFDEMVDHMKAV---AQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTV---SDQLPLIRDYKSKIETELTDICADILKIIEAELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQLASDHANQDLPPTHPIRLGLALNFSVFYYEILNSPDRA 188          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14331_ENTHI (14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.429e-63
Identity = 117/191 (61.26%), Postives = 154/191 (80.63%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE+ VY AKLAEQ+ERY+EMVQ M++V   A    EL++EERNLLSVAYKNVIGA+RASWRI+SS+EQ+E+++GN  HV +IK YR+KIE EL+  C  +LK++ + L+P A+ ++SKVF+ KM+GDY+RY AEF   ++RK  A+ +L AY  A +I+NAELAPTHPIRLGLALNFSVFY+EI+N  D+A
Sbjct:    4 REDCVYTAKLAEQSERYDEMVQCMKQV---AEMEAELSIEERNLLSVAYKNVIGAKRASWRIISSLEQKEQAKGNDKHVEIIKGYRAKIEKELSTCCDDVLKVIQENLLPKASTSESKVFFKKMEGDYYRYFAEFTVDEKRKEVADKSLAAYTEATEISNAELAPTHPIRLGLALNFSVFYFEIMNDADKA 191          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14333_ENTHI (14-3-3 protein 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.231e-62
Identity = 115/190 (60.53%), Postives = 156/190 (82.11%), Query Frame = 3
Query:   96 EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            E+ V+++KLAEQ+ERY+EMVQYM++V   A+   EL+VEERNLLSVAYKNVIG+RRASWRI++S+EQ+E+++GN  HV +IK YR+KIE EL + C  +LK++ + L+P A+ ++SKVFY KM+GDY+RY AEF   ++R+  A+ +L AY  A +I+NA+LAPTHPIRLGLALNFSVFYYEI+N  D+A
Sbjct:    2 EDCVFLSKLAEQSERYDEMVQYMKQV---AALNTELSVEERNLLSVAYKNVIGSRRASWRIITSLEQKEQAKGNDKHVEIIKGYRAKIEDELAKYCDDVLKVIKENLLPNASTSESKVFYKKMEGDYYRYYAEFTVDEKRQEVADKSLAAYTEATEISNADLAPTHPIRLGLALNFSVFYYEIMNDADKA 188          
The following BLAST results are available for this feature:
BLAST of FC931838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
RAD25_SCHPO3.699e-6767.54DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
1433C_SOYBN6.310e-6764.9714-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
14337_SOLLC1.406e-6665.4514-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P... [more]
14312_ARATH9.112e-6667.0214-3-3-like protein GF14 iota OS=Arabidopsis thali... [more]
14338_SOLLC3.462e-6562.4414-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
14311_ARATH3.828e-6463.4514-3-3-like protein GF14 omicron OS=Arabidopsis th... [more]
14310_ARATH8.528e-6463.3514-3-3-like protein GF14 epsilon OS=Arabidopsis th... [more]
1433_FUCVE2.481e-6363.3514-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1[more]
14331_ENTHI9.429e-6361.2614-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=... [more]
14333_ENTHI1.231e-6260.5314-3-3 protein 3 (Fragment) OS=Entamoeba histolyti... [more]

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Properties
Property NameValue
Genbank descriptionC34201G03EF PostHarveN Citrus clementina cDNA clone C34201G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931838 ID=FC931838; Name=FC931838; organism=Citrus clementina; type=EST; length=699bp
GATCAATTCCAAATCGCCCACAAAATCTCCAAAAGAAAACCGAAAGAAAG
AAACAAACACAACTGAACGGAACAATGGCAGCCCCTTCTCCACGGGAAGA
AAACGTATACATGGCGAAACTTGCGGAGCAAGCCGAGCGGTACGAGGAGA
TGGTCCAATACATGGAAAAAGTCGTCGCCTCCGCCTCAACCGGCGAGGAA
CTCACCGTCGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTCAT
CGGCGCACGCCGCGCCTCCTGGCGCATCGTGTCCTCCATCGAGCAGGAGG
AGGAGTCGCGAGGCAACCAGGACCATGTCTCCGTGATTAAGGAGTACAGA
TCGAAGATCGAGGCCGAGTTGACGGAGATCTGTGGCGGGATCTTGAAATT
ATTGGACCAGAAATTGGTTCCCGCCGCTGCCGCTGCCGATTCCAAGGTGT
TTTATTTGAAGATGAAGGGAGATTATCATAGGTACTTGGCCGAGTTTAAG
ACTGGCGATGAGAGGAAAGTCGCCGCTGAGAATACTCTTAATGCCTATAA
ATCTGCTCAGGATATTGCAAATGCTGAACTGGCGCCAACTCATCCTATCC
GGCTAGGACTGGCTCTGAACTTCTCTGTGTTTTACTATGAGATTTTGAAC
TCTCCCGATAGAGCCTGGTACCCTTGCAACAGGCCTTTGATGAAGCATC
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