FC931868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931868 vs. ExPASy Swiss-Prot
Match: CH60_LISIN (60 kDa chaperonin OS=Listeria innocua GN=groL PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.084e-42 Identity = 89/155 (57.42%), Postives = 121/155 (78.06%), Query Frame = 3 Query: 213 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSSKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRVRPIEGRDDIKAVATISAGNDDL 674 AKDI F + +R AM G+D+L++AV +TLGP+GRNVVL++ FGS + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANPV ++RGI+K V +EEL+ +PIE ++ I VA IS+G++++ Sbjct: 2 AKDIKFSEDARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISSGDEEV 156
BLAST of FC931868 vs. ExPASy Swiss-Prot
Match: CH60_GEOSW (60 kDa chaperonin OS=Geobacillus sp. (strain WCH70) GN=groL PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.084e-42 Identity = 89/155 (57.42%), Postives = 121/155 (78.06%), Query Frame = 3 Query: 213 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSSKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRVRPIEGRDDIKAVATISAGNDDL 674 AK+I F + +R AM G+DKL+DAV +TLGP+GRNVVL++ FGS + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ +++GI+K V VEEL+ +PI+G++ I VA ISA ++++ Sbjct: 2 AKEIKFSEEARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGIRKGIEKAVAVAVEELKAISKPIKGKESIAQVAAISAADEEV 156
BLAST of FC931868 vs. ExPASy Swiss-Prot
Match: CH60_CLOBO (60 kDa chaperonin OS=Clostridium botulinum GN=groL PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.416e-42 Identity = 88/155 (56.77%), Postives = 121/155 (78.06%), Query Frame = 3 Query: 213 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSSKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRVRPIEGRDDIKAVATISAGNDDL 674 AK I F + SR AMQAG+DKL++AV +TLGP+GRNVVLD+ FGS + NDGVTIA+ IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ +++GI V VE+++K + ++G++DI VA ISA + ++ Sbjct: 2 AKSILFGEESRRAMQAGVDKLANAVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAKEIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRKGIKLAVDTAVEQIKKSSKQVDGKEDIARVAAISAADPEI 156
BLAST of FC931868 vs. ExPASy Swiss-Prot
Match: CH60_HALOH (60 kDa chaperonin OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=groL PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.849e-42 Identity = 86/157 (54.78%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 213 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSSKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRVRPIEGRDDIKAVATISAGNDDLIG 680 AK++ F + +R A++ G+D L++AV +TLGP+GRNVVL++ FG+ + NDGV+IAR IEL + EN GA ++EVA+KTND AGDGTTTA+VLA+ I K GL +V +GANP+ LKRGI+K V LVEE+++ +P+EG++ + VA ISAGND+ +G Sbjct: 2 AKELKFSEDARRALERGVDTLANAVKVTLGPKGRNVVLEKSFGAPTITNDGVSIAREIELENHYENMGAQTVKEVATKTNDVAGDGTTTATVLAQAIFKEGLKNVAAGANPMILKRGIEKAVQKLVEEIKELSKPVEGKEAVSQVAAISAGNDEEVG 158
BLAST of FC931868 vs. ExPASy Swiss-Prot
Match: CH60_GEOTN (60 kDa chaperonin OS=Geobacillus thermodenitrificans (strain NG80-2) GN=groL PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.849e-42 Identity = 89/155 (57.42%), Postives = 120/155 (77.42%), Query Frame = 3 Query: 213 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSSKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRVRPIEGRDDIKAVATISAGNDDL 674 AK+I F + +R AM G+DKL+DAV +TLGP+GRNVVL++ FGS + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +V +GANP+ ++RGI+K V VEEL+ +PI+G++ I VA ISA ++++ Sbjct: 2 AKEIKFSEEARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVAAGANPMGIRRGIEKAVAVAVEELKAISKPIKGKESIAQVAAISAADEEV 156
BLAST of FC931868 vs. ExPASy Swiss-Prot
Match: CH60_SYNE7 (60 kDa chaperonin OS=Synechococcus elongatus (strain PCC 7942) GN=groL PE=3 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 2.415e-42 Identity = 87/157 (55.41%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 213 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSSKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRVRPIEGRDDIKAVATISAGNDDLIG 680 AK I +++ +R A++ GID L++AV +TLGP+GRNVVL++ FG+ +++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA ++K GL +V +GAN + LKRGIDK + LVE+++ RP+E I V ISAGND +G Sbjct: 2 AKRIIYNENARRALEKGIDILAEAVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAVVKEGLRNVAAGANAILLKRGIDKATNFLVEQIKSHARPVEDSKSIAQVGAISAGNDFEVG 158
BLAST of FC931868 vs. ExPASy Swiss-Prot
Match: CH60_PELPB (60 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groL PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.415e-42 Identity = 88/158 (55.70%), Postives = 118/158 (74.68%), Query Frame = 3 Query: 210 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSSKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRVRPIEGRDDIKAVATISAGNDDLIG 680 +AKDI FD +RA ++ G+DKL++AV +TLGP GRNV++D+ FG+ DGVT+A+ IEL+DP EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +V +GA P+ LKRGID+ V +V+EL R I G+ +I V TISA ND +IG Sbjct: 2 TAKDILFDSDARAKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELSDPFENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVAAGARPIDLKRGIDRAVKEVVQELRNISRSISGKKEIAQVGTISANNDPVIG 159
BLAST of FC931868 vs. ExPASy Swiss-Prot
Match: CH60_CLOBB (60 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groL PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.415e-42 Identity = 87/155 (56.13%), Postives = 120/155 (77.42%), Query Frame = 3 Query: 213 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSSKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRVRPIEGRDDIKAVATISAGNDDL 674 AK + F + +R +MQ G+DKL+D V +TLGP+GRNVVLD+ FGS + NDGV+IAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI V VEE++K +P+EG++DI VA ISA ++++ Sbjct: 2 AKMLKFGEDARRSMQVGVDKLADTVKVTLGPKGRNVVLDKKFGSPLITNDGVSIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRNGIRMAVDKAVEEIKKISKPVEGKEDIARVAAISAADEEI 156
BLAST of FC931868 vs. ExPASy Swiss-Prot
Match: CH60_CLOBA (60 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groL PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.415e-42 Identity = 87/155 (56.13%), Postives = 120/155 (77.42%), Query Frame = 3 Query: 213 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSSKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRVRPIEGRDDIKAVATISAGNDDL 674 AK + F + +R +MQ G+DKL+D V +TLGP+GRNVVLD+ FGS + NDGV+IAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI V VEE++K +P+EG++DI VA ISA ++++ Sbjct: 2 AKMLKFGEDARRSMQVGVDKLADTVKVTLGPKGRNVVLDKKFGSPLITNDGVSIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRNGIRMAVDKAVEEIKKISKPVEGKEDIARVAAISAADEEI 156
BLAST of FC931868 vs. ExPASy Swiss-Prot
Match: CH601_SYNP6 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL1 PE=3 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 2.415e-42 Identity = 87/157 (55.41%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 213 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSSKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRVRPIEGRDDIKAVATISAGNDDLIG 680 AK I +++ +R A++ GID L++AV +TLGP+GRNVVL++ FG+ +++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA ++K GL +V +GAN + LKRGIDK + LVE+++ RP+E I V ISAGND +G Sbjct: 2 AKRIIYNENARRALEKGIDILAEAVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAVVKEGLRNVAAGANAILLKRGIDKATNFLVEQIKSHARPVEDSKSIAQVGAISAGNDFEVG 158 The following BLAST results are available for this feature:
BLAST of FC931868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931868 ID=FC931868; Name=FC931868; organism=Citrus clementina; type=EST; length=700bpback to top |