FC931881

Overview
NameFC931881
Unique NameFC931881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931881 vs. ExPASy Swiss-Prot
Match: S35E1_DROME (Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11
Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 2 
Query:  380 ARKIEVLLLMGL-WYFFNIIFNIYNKQVLKVYRFPVTVTT---CQFGVGTXXXXXXWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGEVAVSFTHTIKATEPFFSVLLSAMF 721
            +R I V+LLM L WY  +   N+  K VL  + FP+TVT    C   + +      W    Y+          I+PLAL   L ++ +++SL +V VS+ HT+KAT P F+V+L+ +F
Sbjct:    8 SRHIAVVLLMCLFWYVISSSNNVIGKMVLNEFPFPMTVTLVQLCSITLYSGPFFNLWRIRKYQDIPRPYYYRLIVPLALGKLLASVTSHISLWKVPVSYAHTVKATMPLFTVVLTRVF 125
The following BLAST results are available for this feature:
BLAST of FC931881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
S35E1_DROME3.964e-1135.59Solute carrier family 35 member E1 homolog OS=Dros... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34202B11EF PostHarveN Citrus clementina cDNA clone C34202B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931881 ID=FC931881; Name=FC931881; organism=Citrus clementina; type=EST; length=721bp
GGCTCATTTTTCAATACGCAGCGCTTTGCTTCTTTTCGCTTCGATTTGAT
TTCATTTTCAGGTCTCCGAAAATATGCAAAGCGCTGCTGCATTCACGGCC
GCCCCTAATCTTCCTCTCCTTAAGCCTCGAAGATTATCCGCAAACCACGC
GCCCGGCCACGTCGTTCTCTGTTCTAAACGACACGATTCCAATGTCGTCC
CCCCTTCTCCCTCTGCCTTCCCGCCTATCCGCCGATCCTGGTCCCTCTCC
TCCACTCCTTCCTCCATGTTCCGGCCTTGGACCGCCGTGCCGCTGCGGGA
TCCCGATACCACGGGCCGTTCTCAAGCCACGGCCGTGCCGGAGAGCGCCG
GCGGTGAGGAACACCAGACGACTGAATTGGCTAGGAAGATAGAAGTTCTC
CTGCTGATGGGCTTGTGGTACTTCTTCAATATCATCTTCAATATTTACAA
CAAACAGGTGCTGAAGGTTTATCGCTTTCCAGTAACCGTAACGACTTGTC
AGTTTGGCGTGGGAACCGTACTGGTTTTGTTGTTGTGGACTTTTAATTTG
TATAGACCAAAAGTTAGCAGCACCCAGCTTGCAGCTATTTTGCCGCTCGC
ATTGGTGCACACGTTGGGTAACCTCTTTACTAATATGAGTCTTGGGGAAG
TGGCTGTTTCATTCACTCACACGATTAAGGCTACGGAGCCATTCTTCTCT
GTTCTCCTATCTGCTATGTTT
back to top