FC931884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.070e-58 Identity = 107/190 (56.32%), Postives = 125/190 (65.79%), Query Frame = 2 Query: 104 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRC 649 SA CGS G C G CCS+FGWCG T DYC G CQS C P T GG+LG IIS MF+ +L++RND C + FY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT HETTGGW AP G YAWGYC+ RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C Sbjct: 22 SAEQCGSQAGGARCASGLCCSKFGWCGNTNDYCGPGNCQSQC---------PGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC 201 HSP 2 Score: 36.5798 bits (83), Expect = 1.070e-58 Identity = 13/23 (56.52%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATDPV+SFK ++WFW Sbjct: 209 LLNNPDLVATDPVISFKSALWFW 231
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 2.370e-58 Identity = 106/190 (55.79%), Postives = 124/190 (65.26%), Query Frame = 2 Query: 107 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTA-GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRC 649 A NCGS G C G+CCS+FGWCG T DYC G CQS C P G G GG+LG IS MF+ +L++RN+ C + FY+Y+AFI AA++FP FG SG+ RKREIAAFFAQT HETTGGW AP G YAWGYCF RE G DYC P+ +PC KY+GRGPIQ+S NYNY C Sbjct: 26 AQNCGSQGGGKACASGQCCSKFGWCGNTNDYCGSGNCQSQC---------PGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERG-NPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPC 205 HSP 2 Score: 37.3502 bits (85), Expect = 2.370e-58 Identity = 13/23 (56.52%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATDPV+SFK ++WFW Sbjct: 213 LLNNPDLVATDPVISFKTALWFW 235
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 4.032e-58 Identity = 110/187 (58.82%), Postives = 127/187 (67.91%), Query Frame = 2 Query: 110 GNCGSGVVCPGGECCSRFGWCGLTTDYCC-EGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRC 649 G G +CPGG CCS+FGWCG T DYC GCQS C+ G A G L +ISR+ F +L +RND CPAR FYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTG GW AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QLSWNYNY +C Sbjct: 4 GRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQC 179 HSP 2 Score: 31.5722 bits (70), Expect = 4.032e-58 Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ++DP +SFK + WFW Sbjct: 187 LLNNPDLLSSDPTISFKSAFWFW 209
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 3.363e-57 Identity = 103/190 (54.21%), Postives = 126/190 (66.32%), Query Frame = 2 Query: 107 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELG-----KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNY 640 A CGS G +CP CCS +GWCG T+DYC +GCQS C+ CG G G GG G ++S+++FE LL +RND CPAR FYTYDA + AA AFP F +G++ RKRE+AAF QT HETTGGW AP G Y+WGYCF E+GA +S YC P+ +PC KY+GRGPIQLS+NYNY Sbjct: 23 AEQCGSQAGGALCPNCLCCSSYGWCGSTSDYCGDGCQSQCDG--CGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEWPCAPDKKYFGRGPIQLSYNYNY 209 HSP 2 Score: 33.8834 bits (76), Expect = 3.363e-57 Identity = 11/23 (47.83%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +P+ A+DPV+SFK ++WFW Sbjct: 220 LLNNPELVASDPVVSFKTALWFW 242
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.386e-57 Identity = 107/189 (56.61%), Postives = 127/189 (67.20%), Query Frame = 2 Query: 107 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCG----ECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNY 640 A CGS G CP CCSRFGWCG T+DYC +GCQS C CG P +G GG + I+SR +F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ RKRE+AAF AQT HETTGGW AP G +AWGYCF +E G A+S+YC P+ +PC GK YYGRGPIQLS NYNY Sbjct: 19 AEQCGSQAGGATCPNCLCCSRFGWCGSTSDYCGDGCQSQC--AGCGGGGTPVTPTPTPSGGGG-VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY 203 HSP 2 Score: 35.039 bits (79), Expect = 4.386e-57 Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATDP +SFK ++WFW Sbjct: 214 LLRNPDLVATDPTVSFKTAMWFW 236
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 5.721e-57 Identity = 104/191 (54.45%), Postives = 124/191 (64.92%), Query Frame = 2 Query: 104 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRC 649 SA CG G C G CCS FGWCG T DYC G CQS C + P G GG++G +IS MF+ +L++RND C + FY+Y+AFI AA++F FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C Sbjct: 17 SAEQCGKQAGGARCAAGLCCSNFGWCGNTNDYCGPGKCQSQCPSGPSPK-PPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC 205 HSP 2 Score: 37.3502 bits (85), Expect = 5.721e-57 Identity = 14/23 (60.87%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATDPV+SFK +IWFW Sbjct: 213 LLNNPDLVATDPVISFKSAIWFW 235
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 9.713e-57 Identity = 104/186 (55.91%), Postives = 126/186 (67.74%), Query Frame = 2 Query: 107 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECD-PDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNY 640 A CG+ G CP CCSR+GWCG T+D+C +GCQS C+ CG P + DG +G I+ R +FE LL +RND CPAR FYTY+AF+ AA AFPAFG +GN RKRE+AAF QT HETTGGWP AP G ++WGYCF +E SDYC P+ +PC KYYGRGPIQLS+N+NY Sbjct: 32 AEQCGAQAGGARCPNCLCCSRWGWCGTTSDFCGDGCQSQCSG--CGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQN-PPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNY 212 HSP 2 Score: 32.3426 bits (72), Expect = 9.713e-57 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATD +SFK ++WFW Sbjct: 223 LLSNPDLVATDATVSFKTALWFW 245
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.652e-56 Identity = 106/191 (55.50%), Postives = 124/191 (64.92%), Query Frame = 2 Query: 104 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRC 649 SA CGS G +C G CCS+FGWCG T DYC G CQS C G G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C Sbjct: 17 SAEQCGSQAGGALCASGLCCSKFGWCGDTNDYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPC 195 HSP 2 Score: 34.2686 bits (77), Expect = 1.652e-56 Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATD V+SFK +IWFW Sbjct: 203 LLNNPDLVATDSVISFKSAIWFW 225
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 2.153e-56 Identity = 99/183 (54.10%), Postives = 121/183 (66.12%), Query Frame = 2 Query: 116 CGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGAASSDYC--DPNYPCRG--KYYGRGPIQLSWNYNY 640 CGS G +CP CCS++GWCG T+ YC GCQS C+ CG P + G G + I+SR +F+ +L +RND CPA+ FYTYDAF+ AA AFP+F +G+ RKRE+AAF AQT HETTGGW AP G Y+WGYCF E G SDYC +PC KYYGRGPIQ+S+NYNY Sbjct: 23 CGSQAGGALCPNCLCCSQYGWCGSTSAYCGSGCQSQCSGS-CGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY 204 HSP 2 Score: 30.0314 bits (66), Expect = 2.153e-56 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD A+D +SFK + WFW Sbjct: 215 LLSNPDLVASDATVSFKTAFWFW 237
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 3.660e-56 Identity = 103/187 (55.08%), Postives = 121/187 (64.71%), Query Frame = 2 Query: 107 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNY 640 A CGS G VCP CCS+FGWCG T+DYC GCQS C+ CG P + G + I+SR +F+ +L +RND CPA FYTYDAF+ AA AFP F +G + KRE+AAF AQT HETTGGW AP G YAWGYCF E GAA DYC + +PC KYYGRGPIQLS+N+NY Sbjct: 21 AEQCGSQAGGAVCPNCLCCSQFGWCGSTSDYCGAGCQSQCSAAGCGGGGPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY 207 HSP 2 Score: 26.5646 bits (57), Expect = 3.660e-56 Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 1 Query: 688 PDPSATDPVLSFKVSIWFW 744 PD A+D +SF + WFW Sbjct: 222 PDLVASDATVSFDTAFWFW 240 The following BLAST results are available for this feature:
BLAST of FC931884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931884 ID=FC931884; Name=FC931884; organism=Citrus clementina; type=EST; length=744bpback to top |