FC931884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 3.660e-56 Identity = 103/191 (53.93%), Postives = 123/191 (64.40%), Query Frame = 2 Query: 104 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRC 649 SA CGS G +C G CCS+FGWCG T +YC G CQS C G G G+LG +IS MF+ +L +RND C + FY+Y+AF+ AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C Sbjct: 21 SAEQCGSQAGGALCASGLCCSKFGWCGNTNEYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPC 199 HSP 2 Score: 37.3502 bits (85), Expect = 3.660e-56 Identity = 14/23 (60.87%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATDPV+SFK +IWFW Sbjct: 207 LLNNPDLVATDPVISFKSAIWFW 229
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 8.111e-56 Identity = 105/191 (54.97%), Postives = 123/191 (64.40%), Query Frame = 2 Query: 104 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRC 649 SA CGS G +C G CCS+FGWCG T DYC G CQS C G G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C Sbjct: 17 SAEQCGSQAGGALCAPGLCCSKFGWCGNTNDYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPC 195 HSP 2 Score: 34.2686 bits (77), Expect = 8.111e-56 Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATD V+SFK +IWFW Sbjct: 203 LLNNPDLVATDSVISFKSAIWFW 225
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 202.216 bits (513), Expect = 2.343e-55 Identity = 104/185 (56.22%), Postives = 123/185 (66.49%), Query Frame = 2 Query: 107 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNY 640 A CGS G CP CCSRFGWCG +T YC +GCQS C+ G P T GG + I+SR +F+ +L +RND C A+ FYTYDAF+ AA AF FG +G RKRE+AAF AQT HETTGGW AP G +AWGYCF +E G A+S+YC P+ +PC GK YYGRGPIQLS NYNY Sbjct: 19 AEQCGSQAGGATCPNCLCCSRFGWCG-STPYCGDGCQSQCSGCGGGST-PVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY 200 HSP 2 Score: 35.039 bits (79), Expect = 2.343e-55 Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATDP +SFK ++WFW Sbjct: 211 LLRNPDLVATDPTVSFKTAMWFW 233
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 5.192e-55 Identity = 104/191 (54.45%), Postives = 122/191 (63.87%), Query Frame = 2 Query: 104 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRC 649 SA CGS G +C G CCS+FGWCG T DYC G CQS C G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGW AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C Sbjct: 17 SAEQCGSQAGGALCASGLCCSKFGWCGNTNDYCGPGNCQSQC-------------PGGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQG-SPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPC 193 HSP 2 Score: 33.8834 bits (76), Expect = 5.192e-55 Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATD ++SFK +IWFW Sbjct: 201 LLNNPDLVATDSIISFKSAIWFW 223
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.954e-54 Identity = 103/191 (53.93%), Postives = 120/191 (62.83%), Query Frame = 2 Query: 104 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDG-GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR--GKYYGRGPIQLSWNYNYLRC 649 SA CG G CP G CCS FGWCG T DYC G CQS C P T G G++ IIS MF+ +L++RND C + FYTY+AFI AA++F FG +G+ T RKRE+AAFFAQT HETTGGW AP G YAWGYC+ RE G S YC +PC KYYGRGPIQ+S+NYNY C Sbjct: 22 SAEQCGKQAGGARCPSGMCCSNFGWCGNTQDYCGPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPS-YCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPC 211 HSP 2 Score: 31.9574 bits (71), Expect = 1.954e-54 Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD AT+ V+SFK +IWFW Sbjct: 219 LLNNPDLVATNAVVSFKSAIWFW 241
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.954e-54 Identity = 97/184 (52.72%), Postives = 120/184 (65.22%), Query Frame = 2 Query: 107 AGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP-NYPCR--GKYYGRGPIQLSWNYNY 640 A CGS G VCP G CCS+FG+CG T YC +GCQS C P T G G++G+++ +F+ +L+YRND RC FYTYDAFI AA++F FG +G++ +K+E+AAF AQT HETTGGWP AP G YAWGYCF E YC P ++PC KYYGRGPIQL+ NYNY Sbjct: 23 AEQCGSQAGGAVCPNGLCCSKFGFCGSTDPYCGDGCQSQCKSSPTPTI-PTPSTGG--GDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQN-TQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNY 202 HSP 2 Score: 33.8834 bits (76), Expect = 1.954e-54 Identity = 11/23 (47.83%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD +T+P +SFK +IWFW Sbjct: 213 LINNPDLLSTNPTVSFKTAIWFW 235
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 2.548e-54 Identity = 95/184 (51.63%), Postives = 121/184 (65.76%), Query Frame = 2 Query: 116 CGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECD--PDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD--PNYPCRG--KYYGRGPIQLSWNYNY 640 CGS G +CP CCS++GWCG T+DYC GCQS C+ G C P ++G G + IIS +F+ +L +RND+ C A+ FYTYDAF+ AA A+P F +G+ KRE+AAF AQT HETTGGWP AP G Y+WGYCF E + YC+ P +PC KYYGRGPIQ+++NYNY Sbjct: 21 CGSQAGGALCPNCLCCSQYGWCGSTSDYCGAGCQSQCS----GGCGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNY 200 HSP 2 Score: 30.0314 bits (66), Expect = 2.548e-54 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD A+D +SFK + WFW Sbjct: 211 LLNNPDLVASDATVSFKTAFWFW 233
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.313e-46 Identity = 87/162 (53.70%), Postives = 100/162 (61.73%), Query Frame = 2 Query: 101 GSAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGE----LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYC-FNREVGAASSD 562 GSA CG +CPGG CCS +GWCG T DYC +GCQS C+ G G G GG L II MF+D+L+YRND +CPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HET G WP A G +Y WGYC N G D Sbjct: 19 GSAEQCGQQAGDALCPGGLCCSSYGWCGTTADYCGDGCQSQCDGGGGGGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHMNYNYGLCGDD 180 HSP 2 Score: 31.187 bits (69), Expect = 1.313e-46 Identity = 9/23 (39.13%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +++ P+ TDP ++FK ++WFW Sbjct: 185 LLQEPELVETDPFIAFKTALWFW 207
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 4.951e-46 Identity = 81/126 (64.29%), Postives = 97/126 (76.98%), Query Frame = 2 Query: 284 KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRC 649 KIISR MF+ +L++RN+ CPA+ FYTYDAF+ AAK+FP+FG +G+ +RKRE+AAF QT HETTGGWP AP G YAWGYCF +E SS+YC P YPC GK YYGRGP+QLSWNYNY C Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERN-PSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPC 128 HSP 2 Score: 33.8834 bits (76), Expect = 4.951e-46 Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 1 Query: 685 HPDPSATDPVLSFKVSIWFW 744 +PD ATD VLSFK ++WFW Sbjct: 139 NPDLVATDRVLSFKTALWFW 158
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.009e-44 Identity = 92/188 (48.94%), Postives = 116/188 (61.70%), Query Frame = 2 Query: 110 GNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDG-----TAGDGGELG--KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNY 640 G G CP CCSR+GWCGLT DYC GCQS C V + DD TA GG G +++ FE +L +R+D CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYC+ +EV A+SD+C PN +PC GK Y+ RGP+Q+++NYNY Sbjct: 36 GRQAGGARCPNRLCCSRWGWCGLTDDYCKGGCQSQCR--VSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY 213 HSP 2 Score: 29.6462 bits (65), Expect = 2.009e-44 Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 685 HPDPSATDPVLSFKVSIWFW 744 +P+ ATDP ++FK ++W W Sbjct: 227 NPELVATDPTVAFKTALWLW 246 The following BLAST results are available for this feature:
BLAST of FC931884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931884 ID=FC931884; Name=FC931884; organism=Citrus clementina; type=EST; length=744bpback to top |