FC931884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.009e-44 Identity = 92/188 (48.94%), Postives = 116/188 (61.70%), Query Frame = 2 Query: 110 GNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDG-----TAGDGGELG--KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNY 640 G G CP CCSR+GWCGLT DYC GCQS C V + DD TA GG G +++ FE +L +R+D CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYC+ +EV A+SD+C PN +PC GK Y+ RGP+Q+++NYNY Sbjct: 36 GRQAGGARCPNRLCCSRWGWCGLTDDYCKGGCQSQCR--VSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY 213 HSP 2 Score: 29.6462 bits (65), Expect = 2.009e-44 Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 685 HPDPSATDPVLSFKVSIWFW 744 +P+ ATDP ++FK ++W W Sbjct: 227 NPELVATDPTVAFKTALWLW 246
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.011e-44 Identity = 81/185 (43.78%), Postives = 99/185 (53.51%), Query Frame = 2 Query: 116 CGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP----NYPCRGKYYGRGPIQLSWNYNYLRC 649 CGS CP CCS G+CGLT YCC GC S C + MFE +L RN+ CP + FYTYDA+ A + +P FG +G++ RKRE+AAFFAQT ET+G + WGYC E+ +SDYCDP +YPC YYGRGP+QL WNYNY C Sbjct: 26 CGSQAGNATCPNDLCCSSGGYCGLTVAYCCAGCVSQCRNC--------------------FFTESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELN-PNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGEC 189 HSP 2 Score: 36.1946 bits (82), Expect = 2.011e-44 Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +++ P+ ATDPVLSF+ ++WFW Sbjct: 197 LLDEPEKVATDPVLSFEAALWFW 219
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 6.822e-42 Identity = 75/127 (59.06%), Postives = 91/127 (71.65%), Query Frame = 2 Query: 272 GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNY 640 G + IIS F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ RKR++AAF AQT HETTGGW AP G +AWGYCF +E GAA +DYC P+ +PC +YYGRGPIQLS NYNY Sbjct: 23 GSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAA-ADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY 148 HSP 2 Score: 35.4242 bits (80), Expect = 6.822e-42 Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATDP +SFK ++WFW Sbjct: 159 LLRNPDLVATDPTVSFKTALWFW 181
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.967e-41 Identity = 76/127 (59.84%), Postives = 92/127 (72.44%), Query Frame = 2 Query: 272 GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNY 640 G + I+SR F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ +KRE+AAF AQT HETTGGW AP G +AWGYCF +E G ASSDYC P+ +PC +YYGRGPIQLS NYNY Sbjct: 23 GSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY 148 HSP 2 Score: 31.187 bits (69), Expect = 1.967e-41 Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATD + FK +IWFW Sbjct: 159 LLANPDLVATDATVGFKTAIWFW 181
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.307e-39 Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 2 Query: 278 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR--GKYYGRGPIQLSWNYNY 640 + +IS+ +FE +L +RND+ C A+ FYTY+AFI A K F AFG +G+ R +EIAAF AQT HETTGGW AP G Y+WGYC+NRE G + DYC +PC KY+GRGPIQ+S+NYNY Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQG-SPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNY 128 HSP 2 Score: 31.9574 bits (71), Expect = 2.307e-39 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD A D V+SFK ++WFW Sbjct: 139 LLNNPDLVANDAVVSFKTALWFW 161
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.853e-35 Identity = 67/129 (51.94%), Postives = 81/129 (62.79%), Query Frame = 2 Query: 254 GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNY 640 G +G +G II+R MFE +L +R D+ C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT HETTGGW AP G +AWGYC E+ P YYGRGPIQL+ YNY Sbjct: 19 GASGQQAGVGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEI-----------TPSDPPYYGRGPIQLTHKYNY 135 HSP 2 Score: 33.8834 bits (76), Expect = 1.853e-35 Identity = 11/23 (47.83%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +V +PD ++DPV++F+ +IWFW Sbjct: 146 LVNNPDLVSSDPVVAFRTAIWFW 168
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.053e-32 Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = 2 Query: 281 GKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNYLR 646 G I++R++FE +L +RN+ CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYCF R++ + +YYGRGPIQL+ NY R Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD------------RYYGRGPIQLTHQSNYER 133 HSP 2 Score: 37.7354 bits (86), Expect = 1.053e-32 Identity = 13/23 (56.52%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +V +PD ATDP++SF+ +IWFW Sbjct: 144 LVNNPDLVATDPIISFRTAIWFW 166
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.053e-32 Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 2 Query: 281 GKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNYLR 646 G I++R++FE +L +RN+ CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYCF +++ + +YYGRGPIQL+ NY R Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD------------RYYGRGPIQLTHQSNYER 133 HSP 2 Score: 38.891 bits (89), Expect = 1.053e-32 Identity = 14/23 (60.87%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +V +PD ATDP++SFK +IWFW Sbjct: 144 LVNNPDLVATDPIISFKTAIWFW 166
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.719e-32 Identity = 63/122 (51.64%), Postives = 80/122 (65.57%), Query Frame = 2 Query: 275 ELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNY 640 ++G I++ +F ++L+ RND RCPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG A G +A GYCF RE S +YGRGPIQL+ NY Sbjct: 18 DVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSG-----------FYGRGPIQLTGQSNY 127 HSP 2 Score: 34.2686 bits (77), Expect = 8.719e-32 Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +V +PD ATD +SFK +IWFW Sbjct: 138 LVNNPDLVATDATVSFKTAIWFW 160
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.580e-32 Identity = 68/141 (48.23%), Postives = 86/141 (60.99%), Query Frame = 2 Query: 254 GTAGDGG------ELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD------PNYPCRGKYYGRGPIQLSWNYNY 640 G G GG + I+S +++ L +++D CPAR FYTY +F+ AA FP F +G RKRE+AAF AQ HETTGGW AP G YAWG C+ E+ SS YCD P YP + Y+GRGPIQ+SWN+NY Sbjct: 35 GGGGGGGYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSS-YCDATDKQWPCYPGK-SYHGRGPIQISWNFNY 173 The following BLAST results are available for this feature:
BLAST of FC931884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931884 ID=FC931884; Name=FC931884; organism=Citrus clementina; type=EST; length=744bpback to top |