FC931884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.922e-31 Identity = 70/184 (38.04%), Postives = 96/184 (52.17%), Query Frame = 2 Query: 104 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP---NYPCRG--KYYGRGPIQLSWNYNY 640 +A NCG C CCS+FG+CG T +YC +GCQS C G+ G G + +++ F + + + C + FYT AF+ A K +P F + G++ KREIAAFFA HET +C+ E+ S+ YCDP +PC KYYGRGP+Q+SWNYNY Sbjct: 19 AAQNCG----CQPNVCCSKFGYCGTTDEYCGDGCQSG----PCRSGRGGGGSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEIN-KSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY 179 HSP 2 Score: 26.9498 bits (58), Expect = 1.922e-31 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 1 Query: 688 PDPSATDPVLSFKVSIWFW 744 P A D V++FK ++WFW Sbjct: 194 PGRVARDAVVAFKAALWFW 212
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.533e-31 Identity = 63/121 (52.07%), Postives = 78/121 (64.46%), Query Frame = 2 Query: 278 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNY 640 +G I++ +F+ +L+ RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG +P G YA GYCF RE + YYGRGPIQL+ NY Sbjct: 26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNG-----------YYGRGPIQLTGQSNY 134 HSP 2 Score: 34.2686 bits (77), Expect = 5.533e-31 Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +V +PD ATD +SFK +IWFW Sbjct: 145 LVNNPDLVATDATVSFKTAIWFW 167
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 9.320e-31 Identity = 67/182 (36.81%), Postives = 94/182 (51.65%), Query Frame = 2 Query: 116 CGSGV---VCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC-DPNYPCRG--KYYGRGPIQLSWNYNY 640 CG+ V C CCS GWCG DYC CQ C+ V G G + +++ +F+ + +R D CP++ FY+Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C +D+C ++PC KY RGPIQL+ N+NY Sbjct: 72 CGAAVGNPPCGQDRCCSVHGWCGGGNDYCSGSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY 250 HSP 2 Score: 34.2686 bits (77), Expect = 9.320e-31 Identity = 10/23 (43.48%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++++PD DP++SFK ++WFW Sbjct: 261 LIQNPDLVEKDPIISFKTALWFW 283
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.220e-30 Identity = 71/184 (38.59%), Postives = 100/184 (54.35%), Query Frame = 2 Query: 104 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD---PNYPC-RGK-YYGRGPIQLSWNYNY 640 +A +CG C +CCS++G+CG +DYC GCQ+ P D A + + I++ + F L+ +D C A+ FYT DAF+ AA +P+FG +G+ KREIAAFFA HET +C+ E+ S +YCD +PC GK YYGRGP+Q+SWN+NY Sbjct: 24 AAQSCG----CASDQCCSKWGFCGTGSDYCGTGCQAG----------PCDVPATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY 179 HSP 2 Score: 29.261 bits (64), Expect = 1.220e-30 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 688 PDPSATDPVLSFKVSIWFW 744 PD A PVL+F+ ++W+W Sbjct: 194 PDAVARSPVLAFQTALWYW 212
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.222e-30 Identity = 62/121 (51.24%), Postives = 79/121 (65.29%), Query Frame = 2 Query: 278 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNY 640 +G I++ +F ++L+ RND RCPA FYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG A + GYCF R+ +D D +YYGRGPIQL+ NY Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNQNNY 133 HSP 2 Score: 34.6538 bits (78), Expect = 1.222e-30 Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +V +PD ATD +SFK +IWFW Sbjct: 144 LVNNPDLVATDATISFKTAIWFW 166
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 3.505e-30 Identity = 69/189 (36.51%), Postives = 97/189 (51.32%), Query Frame = 2 Query: 104 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSN-C----NQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR--GKYYGRGPIQLSWNYNY 640 +A NCG C G CCS++G+CG T YC +GCQS C + G G AG G + +++ F + + + C + FYT +F+ AA+++ F N KREIAAFFA HET C+ E+ A+ DYCD + +PC+ KYYGRGP+Q+SWN+NY Sbjct: 26 AAQNCG----CQDGYCCSQWGYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAG-AGAGVSVESVVTEAFFNGI-KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY 195 HSP 2 Score: 33.113 bits (74), Expect = 3.505e-30 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 688 PDPSATDPVLSFKVSIWFW 744 PD A DP +SFK ++WFW Sbjct: 210 PDKVAQDPTISFKTALWFW 228
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.514e-30 Identity = 61/121 (50.41%), Postives = 79/121 (65.29%), Query Frame = 2 Query: 278 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNY 640 +G I++ +F ++L+ RND RCPA FYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG A + GYCF R+ +D D +YYGRGPIQL+ NY Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNRNNY 133 HSP 2 Score: 34.6538 bits (78), Expect = 3.514e-30 Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +V +PD ATD +SFK +IWFW Sbjct: 144 LVNNPDLVATDATISFKTAIWFW 166
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.563e-30 Identity = 71/188 (37.77%), Postives = 94/188 (50.00%), Query Frame = 2 Query: 104 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSN-CNQVVCGECDPDDGTAGDGGELG---KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR--GKYYGRGPIQLSWNYNY 640 SA NCG C CCS++G+CG DYC +GC+S C G G G GG G + + + F + ++ + C + FYT +F+ AA ++ F KREIAAFFA HET C+ E+ AS DYCD N +PC+ KYYGRGP+Q+SWNYNY Sbjct: 28 SAQNCG----CQSNMCCSKWGYCGTGKDYCGDGCRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY 198 HSP 2 Score: 32.7278 bits (73), Expect = 4.563e-30 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 688 PDPSATDPVLSFKVSIWFW 744 PD A DP +SFK ++WFW Sbjct: 213 PDRVAQDPTISFKTALWFW 231
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.572e-30 Identity = 62/130 (47.69%), Postives = 80/130 (61.54%), Query Frame = 2 Query: 254 GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLSWNYNY 640 G A G +G +I++ +F +L R++ +CPAR FYTYDAFI AA +FPAFG SG + +RE+AAFF QT HETTGG ++ WGYCF E+ A+S YYGRGPIQL+ NY Sbjct: 26 GAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSP----------PYYGRGPIQLTGQSNY 142 HSP 2 Score: 33.8834 bits (76), Expect = 4.572e-30 Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +V +PD +TD V+SFK +IWFW Sbjct: 153 LVGNPDLVSTDAVVSFKTAIWFW 175
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.312e-29 Identity = 72/185 (38.92%), Postives = 93/185 (50.27%), Query Frame = 2 Query: 104 SAGNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSN-CNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLSWNYNY 640 +A NCG C CCS+FG+CG T YC +GCQS C G G G GG + F + ++ + C + FYT AF+ A A+P F + G E KREIAAFFA HET +C+ E+ S+ YCD + +PC KYYGRGP+Q+SWNYNY Sbjct: 24 AAQNCG----CQPNFCCSKFGYCGTTDAYCGDGCQSGPCRSGGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEIN-KSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY 190 HSP 2 Score: 28.1054 bits (61), Expect = 1.312e-29 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 688 PDPSATDPVLSFKVSIWFW 744 P+ A D V++FK ++WFW Sbjct: 205 PNRVAQDAVIAFKTALWFW 223 The following BLAST results are available for this feature:
BLAST of FC931884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931884 ID=FC931884; Name=FC931884; organism=Citrus clementina; type=EST; length=744bpback to top |