FC931885
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_LACSS (Putative agmatine deiminase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=aguA PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 6.035e-63 Identity = 121/226 (53.54%), Postives = 149/226 (65.93%), Query Frame = 2
Query: 5 TPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
+P GY MP E+E H ++ WPERPDNWR+ A AQ FAKVA I++FE VTV S Q+ NAR L +NI+V+EMS NDSW RD GPT VVN S G+DW FN+WGG+ DG Y W D +VA+K+ E R+ +VLEGGS HVDGEGT L TEECLL+ RNP L+K QIE+ LK YL V KIIWL +G++ D+TNGH+DN+ F
Sbjct: 7 SPKKDGYRMPGEFEAHKDVYLLWPERPDNWREGAKPAQATFAKVAETIAQFESVTVGVSDRQYTNARHMLADNIQVVEMSNNDSWIRDCGPTFVVNDKGDS--------RGVDWTFNAWGGLVDGLYFPWDKDDRVAQKVCEIEGRDRYRLDDLVLEGGSTHVDGEGTLLVTEECLLSDGRNPQLSKEQIESILKEYLNVEKIIWLKKGIY-LDETNGHVDNIANF 223 HSP 2 Score: 25.0238 bits (53), Expect = 6.035e-63 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query: 676 FFKPGVVLLSWTD 714
F KPG V+L+WTD
Sbjct: 223 FVKPGQVVLAWTD 235
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA2_LISMF (Putative agmatine deiminase 2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=aguA2 PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 3.867e-62 Identity = 117/227 (51.54%), Postives = 151/227 (66.52%), Query Frame = 2
Query: 2 GTPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
G P G+ MP E+EPH C+M WPERPDNWR AQ+ + +VA AIS FEPVT+ S Q++NAR +LP+ IRVIEMS +D+W RD GP+ +VN ++ G+DW FN+WGG+ DG Y W D Q+A+K+ ERL + +LEG SIHVDGEGT +TTEECLL++ RNP+L K +IE LK Y V K+IWL G F D+TNGH+DN+ F
Sbjct: 6 GLPVEDGFRMPGEYEPHIGCFMIWPERPDNWRLGGKPAQQNYKEVAVAISNFEPVTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVNDKG--------EMRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCDLERLDYYSQKDFILEGCSIHVDGEGTLVTTEECLLSEGRNPNLTKIEIEQTLKKYFHVQKVIWLKHG-FYLDETNGHVDNIFNF 223 HSP 2 Score: 23.8682 bits (50), Expect = 3.867e-62 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 1
Query: 676 FFKPGVVLLSWTD 714
F PG V+LSWTD
Sbjct: 223 FVAPGEVVLSWTD 235
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_YERPS (Putative agmatine deiminase OS=Yersinia pseudotuberculosis GN=aguA PE=3 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 3.867e-62 Identity = 113/226 (50.00%), Postives = 147/226 (65.04%), Query Frame = 2
Query: 2 GTPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
GTP G+ MPAEW P WM WP R DNWR A+ AQ+ FAKVA AIS+ PV + A A++ +P N+ ++EM+ +D+W RDTGPT+V+N A + +DW FN+WGG++ G Y DW D +VA ++ + + ++LEGGSIH DGEGT LTT ECLLN NRNPHLN+ QIE L YLGV IWL G++ +D+T+GHIDNMCCF
Sbjct: 9 GTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVAEAISRATPVFMGVPAEFMAQAKATMPANVTLVEMASDDAWMRDTGPTMVING--------AAERRAVDWQFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGSIHTDGEGTLLTTAECLLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVY-NDETDGHIDNMCCF 225 HSP 2 Score: 22.3274 bits (46), Expect = 3.867e-62 Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 1
Query: 676 FFKPGVVLLSWTD 714
F +PG V L WTD
Sbjct: 225 FVRPGEVALHWTD 237
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_YERPE (Putative agmatine deiminase OS=Yersinia pestis GN=aguA PE=3 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 3.867e-62 Identity = 113/226 (50.00%), Postives = 147/226 (65.04%), Query Frame = 2
Query: 2 GTPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
GTP G+ MPAEW P WM WP R DNWR A+ AQ+ FAKVA AIS+ PV + A A++ +P N+ ++EM+ +D+W RDTGPT+V+N A + +DW FN+WGG++ G Y DW D +VA ++ + + ++LEGGSIH DGEGT LTT ECLLN NRNPHLN+ QIE L YLGV IWL G++ +D+T+GHIDNMCCF
Sbjct: 9 GTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVAEAISRATPVFMGVPAEFMAQAKATMPANVTLVEMASDDAWMRDTGPTMVING--------AAERRAVDWQFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGSIHTDGEGTLLTTAECLLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVY-NDETDGHIDNMCCF 225 HSP 2 Score: 22.3274 bits (46), Expect = 3.867e-62 Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 1
Query: 676 FFKPGVVLLSWTD 714
F +PG V L WTD
Sbjct: 225 FVRPGEVALHWTD 237
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_YERP3 (Putative agmatine deiminase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=aguA PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 3.867e-62 Identity = 113/226 (50.00%), Postives = 147/226 (65.04%), Query Frame = 2
Query: 2 GTPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
GTP G+ MPAEW P WM WP R DNWR A+ AQ+ FAKVA AIS+ PV + A A++ +P N+ ++EM+ +D+W RDTGPT+V+N A + +DW FN+WGG++ G Y DW D +VA ++ + + ++LEGGSIH DGEGT LTT ECLLN NRNPHLN+ QIE L YLGV IWL G++ +D+T+GHIDNMCCF
Sbjct: 9 GTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVAEAISRATPVFMGVPAEFMAQAKATMPANVTLVEMASDDAWMRDTGPTMVING--------AAERRAVDWQFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGSIHTDGEGTLLTTAECLLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVY-NDETDGHIDNMCCF 225 HSP 2 Score: 22.3274 bits (46), Expect = 3.867e-62 Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 1
Query: 676 FFKPGVVLLSWTD 714
F +PG V L WTD
Sbjct: 225 FVRPGEVALHWTD 237
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA2_LISMO (Putative agmatine deiminase 2 OS=Listeria monocytogenes GN=aguA2 PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 1.217e-60 Identity = 114/227 (50.22%), Postives = 149/227 (65.64%), Query Frame = 2
Query: 2 GTPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
G P G+ MP E+EPH C+M WPERPDNWR AQ+ + +VA AIS FEPVT+ S Q++NAR +LP+ IRVIEMS +D+W RD GP+ +V+ + G+DW FN+WGG+ DG Y W D Q+A+K+ ER+ + +LEG SIHVDGEGT +TTEECLL++ RNP+L K +IE LK Y K+IWL G F D+TNGH+DN+ F
Sbjct: 6 GLPVEDGFRMPGEYEPHIGCFMIWPERPDNWRLGGKPAQQNYKEVAVAISNFEPVTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVDDKG--------DMRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCELERIDYYSQKDFILEGCSIHVDGEGTLVTTEECLLSEGRNPNLTKIEIEQTLKKYFHAQKVIWLKHG-FYLDETNGHVDNIFNF 223 HSP 2 Score: 23.8682 bits (50), Expect = 1.217e-60 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 1
Query: 676 FFKPGVVLLSWTD 714
F PG V+LSWTD
Sbjct: 223 FVAPGEVVLSWTD 235
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB2 (Putative agmatine deiminase OS=Shewanella baltica (strain OS223) GN=aguA PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 2.069e-60 Identity = 110/225 (48.89%), Postives = 143/225 (63.56%), Query Frame = 2
Query: 8 PALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFS 682
P+ G+ MPAEW WM WP RPDNWR +AQ FAKVA AI PV + A A++ +P ++ ++EM ND W RDTGPT+VVN + + G+DW FN+WGG + G Y W D QVA+++L R+ ++LEGGSIHVDGEGTC+T+ ECLLN NRNP L K QIE+ L+ YL V + IWL G++ D+T+GHIDNMCCF+
Sbjct: 15 PSQDGFYMPAEWAAQQAVWMIWPYRPDNWRSAGAYAQATFAKVADAIGAATPVYMGVPKAFLAEAKTVMPSHVTLVEMDSNDCWARDTGPTVVVNDNG--------ECRGVDWGFNAWGGHNGGLYFPWDKDEQVAQQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTSAECLLNANRNPDLTKEQIEDLLRDYLNVKQFIWLQDGVY-MDETDGHIDNMCCFA 230 HSP 2 Score: 23.0978 bits (48), Expect = 2.069e-60 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 1
Query: 676 FFKPGVVLLSWTD 714
F +PG V+L WTD
Sbjct: 229 FARPGEVILHWTD 241
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB9 (Putative agmatine deiminase OS=Shewanella baltica (strain OS195) GN=aguA PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 3.518e-60 Identity = 110/225 (48.89%), Postives = 142/225 (63.11%), Query Frame = 2
Query: 8 PALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFS 682
P+ G+ MPAEW WM WP RPDNWR +AQ FAKVA AI PV + A A++ +P ++ ++EM ND W RDTGPT+VVN + G+DW FN+WGG + G Y W D QVA+++L R+ ++LEGGSIHVDGEGTC+T+ ECLLN NRNP L K QIE+ L+ YL V + IWL G++ D+T+GHIDNMCCF+
Sbjct: 15 PSQDGFYMPAEWAAQQAVWMIWPYRPDNWRSAGAYAQATFAKVADAIGGATPVYMGVPKAFLAEAKTVMPSHVTLVEMDSNDCWARDTGPTVVVNAEG--------ECRGVDWGFNAWGGHNGGLYFPWDKDEQVAQQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTSAECLLNANRNPDLTKEQIEDLLRDYLNVKQFIWLQDGVY-MDETDGHIDNMCCFA 230 HSP 2 Score: 23.0978 bits (48), Expect = 3.518e-60 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 1
Query: 676 FFKPGVVLLSWTD 714
F +PG V+L WTD
Sbjct: 229 FARPGEVILHWTD 241
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB5 (Putative agmatine deiminase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=aguA PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 3.518e-60 Identity = 110/225 (48.89%), Postives = 142/225 (63.11%), Query Frame = 2
Query: 8 PALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFS 682
P+ G+ MPAEW WM WP RPDNWR +AQ FAKVA AI PV + A A+ +P ++ ++EM ND W RDTGPT+VVN + + G+DW FN+WGG + G Y W D QVA+++L R+ ++LEGGSIHVDGEGTC+T+ ECLLN NRNP L K QIE+ L+ YL V + IWL G++ D+T+GHIDNMCCF+
Sbjct: 15 PSQDGFYMPAEWAAQQAVWMIWPYRPDNWRSAGAYAQATFAKVADAIGGATPVYMGVPKAFLAEAQKVMPSHVTLVEMDSNDCWARDTGPTVVVNDNG--------ECRGVDWGFNAWGGHNGGLYFPWDKDEQVAQQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTSAECLLNANRNPELTKEQIEDLLRDYLNVKQFIWLQDGVY-MDETDGHIDNMCCFA 230 HSP 2 Score: 23.0978 bits (48), Expect = 3.518e-60 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 1
Query: 676 FFKPGVVLLSWTD 714
F +PG V+L WTD
Sbjct: 229 FARPGEVILHWTD 241
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB8 (Putative agmatine deiminase OS=Shewanella baltica (strain OS185) GN=aguA PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 4.587e-60 Identity = 109/225 (48.44%), Postives = 141/225 (62.67%), Query Frame = 2
Query: 8 PALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFS 682
P+ G+ MPAEW WM WP RPDNWR +AQ FAKVA AI PV + A A+ +P ++ ++EM ND W RDTGPT+V+N + G+DW FN+WGG + G Y W D QVA+++L R+ ++LEGGSIHVDGEGTC+T+ ECLLN NRNP L K QIE+ L+ YL V + IWL G++ D+T+GHIDNMCCF+
Sbjct: 15 PSQDGFYMPAEWAAQQAVWMIWPHRPDNWRSAGAYAQATFAKVADAIGGATPVYMGVPKAFLAEAQKVMPSHVTLVEMDSNDCWARDTGPTVVINAEG--------ECRGVDWGFNAWGGHNGGLYFPWDKDEQVAQQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTSAECLLNANRNPDLTKEQIEDLLRDYLNVKQFIWLQDGVY-MDETDGHIDNMCCFA 230 HSP 2 Score: 23.0978 bits (48), Expect = 4.587e-60 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 1
Query: 676 FFKPGVVLLSWTD 714
F +PG V+L WTD
Sbjct: 229 FARPGEVILHWTD 241 The following BLAST results are available for this feature:
BLAST of FC931885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931885 ID=FC931885; Name=FC931885; organism=Citrus clementina; type=EST; length=714bpback to top |