FC931886

Overview
NameFC931886
Unique NameFC931886
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931886 vs. ExPASy Swiss-Prot
Match: THI4_PYRIL (Putative thiazole biosynthetic enzyme OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_1998 PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 1
Query:    4 QIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQ-DSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 633
            ++ + E+  S GGG    G +   +VV++ A   L +  I Y    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+    S +DP   +AK V+ + GHD    +   +++  +G+  EV G K+     +E  +V  T  V PG+ V GM V  + G PRMGP FG M++SG++AA +  K L
Sbjct:   47 KVVVYERRFSFGGGIGPGGNMIPKIVVQEEAVPVLRDFKIRYKPVGDGLYTVDPAELIAKLAAGAIDA--GAKIILGVHVDDVIFRGDPPRVVGLLWVWTPIQMSG---SHVDPLYTQAKAVLDATGHDAEVISIAARKVPELGI--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYVAGMAVCTVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252          
BLAST of FC931886 vs. ExPASy Swiss-Prot
Match: THI4_PYRAE (Putative thiazole biosynthetic enzyme OS=Pyrobaculum aerophilum GN=PAE0175 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18
Identity = 61/214 (28.50%), Postives = 104/214 (48.60%), Query Frame = 1
Query:    1 IQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 633
            +++ + E+  S GGG    G +   +VV++ A   L +  + Y   +D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+      +DP   +AK V+ + GHD    +   +++  +G+  +V G K+     +E  +V  T  V PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L
Sbjct:   46 LKVVVYERRFSFGGGIGPGGNMLPKIVVQEEAVPILRDFKVRYKPAEDGLYTVDPAELIAKLAAGAVDA--GAKIILGVHVDDVIFRGDPPRVTGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGI--QVVGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGKKVAEVVYKDL 252          
BLAST of FC931886 vs. ExPASy Swiss-Prot
Match: THI4_THENV (Putative thiazole biosynthetic enzyme OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1052 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17
Identity = 62/213 (29.11%), Postives = 103/213 (48.36%), Query Frame = 1
Query:    4 QIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQ-DSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 633
            ++ + E+  S GGG    G +   +VV++ A   L +  + Y    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+    S +DP   +A+ V+ + GHD    +   +++  +G+  EV G K+     +E  +V  T  V PG+   GM V  + G PRMGP FG M++SG++AA +  K L
Sbjct:   47 RVVVYERRFSFGGGIGPGGNMIPKIVVQEEAVPVLKDFRVRYRPVGDGLYTVDPAELIAKLAAGAIDA--GAKIILGVHVDDVIFRGDPPRVAGLLWVWTPIQMSG---SHVDPLYTQARAVLDATGHDAEVISIASRKVPELGV--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYAAGMAVCAVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252          
BLAST of FC931886 vs. ExPASy Swiss-Prot
Match: THI4_PYRCJ (Putative thiazole biosynthetic enzyme OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_1555 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17
Identity = 59/215 (27.44%), Postives = 103/215 (47.91%), Query Frame = 1
Query:    4 QIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQ-DSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 639
            ++ + E+  S GGG    G +   +VV++ A   L +  + +    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+      +DP   +AK V+ + GHD    +   +++  +G+  ++ G K+     +E  +V  T  V PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L +
Sbjct:   47 KVLVFERRFSFGGGIGPGGNMIPKIVVQEEALPILKDFKVRFKPAGDGLYTVDPAELIAKLAAGAIDA--GAKILLGVHVDDVIFRGDPPRVAGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGL--QLQGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGRKVAEVVAKDLAE 254          
BLAST of FC931886 vs. ExPASy Swiss-Prot
Match: THI4_DESMR (Putative thiazole biosynthetic enzyme OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=DMR_31420 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.779e-17
Identity = 67/218 (30.73%), Postives = 116/218 (53.21%), Query Frame = 1
Query:    7 IAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG----RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKR--LKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQK-AAHLALKSLG 636
            +A+ E+ +S GGG W  G  F+ +VV++ +   L ++G+     +D+Y      A  T+   +  LA    K+FN ++ ED++++      RV G+V N + V +       +DP V+ +K +V + GH      T V++  ++       + G +++  ++AE   V+ TRE+ PG+ V GM      G+ RMGP FG M++SG+K AA +A K  G
Sbjct:   51 VALFERKLSLGGGMWGGGMTFNMIVVQEESVHLLTDVGVPVKRYKDNYFTADAVAATTTLASAACLA--GAKIFNCMSVEDVMLREENGVKRVTGIVINSSPVEI---AGLHVDPVVLGSKYLVEATGHAVEVLQTLVRKNDVRLNTPSGGIEGEQSMWADTAEINTVKNTREIFPGLYVAGMAANASYGSYRMGPIFGGMLLSGEKVAADIAAKLKG 263          
The following BLAST results are available for this feature:
BLAST of FC931886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
THI4_PYRIL2.513e-1830.52Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_PYRAE7.312e-1828.50Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_THENV1.629e-1729.11Putative thiazole biosynthetic enzyme OS=Thermopro... [more]
THI4_PYRCJ2.127e-1727.44Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_DESMR2.779e-1730.73Putative thiazole biosynthetic enzyme OS=Desulfovi... [more]

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Properties
Property NameValue
Genbank descriptionC34202C04EF PostHarveN Citrus clementina cDNA clone C34202C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931886 ID=FC931886; Name=FC931886; organism=Citrus clementina; type=EST; length=710bp
ATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCGTG
GCTCAGTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAAACCAGCCCACA
TCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAAGACAGCTATGTT
GTGATCAAGCATGCAGCGCTGTTCACCTCCACTATAATGAGCAAGCTCCT
GGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGCCGAGGACTTGA
TAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTGACCAACTGGGCGTTGGTG
TCAATGAATCACGATACACAGTCTTGCATGGATCCCAATGTAATGGAAGC
GAAGGTGGTTGTGAGCTCTTGTGGCCATGATGGGCCTTTTGGGGCCACTG
GAGTAAAGAGGTTGAAGAGTATCGGAATGATTGAGGAAGTGCCTGGAATG
AAGGCACTGGACATGAACTCTGCAGAAGATGCTATTGTGAGGCTGACCAG
GGAGGTTGTGCCTGGTATGATAGTTACCGGCATGGAAGTTGCCGAGATTG
ATGGTGCTCCTAGAATGGGGCCAACATTTGGAGCAATGATGATATCGGGG
CAGAAGGCTGCGCATTTGGCGTTGAAGTCACTGGGCCAGCCGAATGCATT
AGACGGTACATATGTGGGAGGTGTTCACCCTGAGCTGATCTTAGCTGCAG
CTGATTCTGC
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