FC931887

Overview
NameFC931887
Unique NameFC931887
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_BACHD (Chaperone protein htpG OS=Bacillus halodurans GN=htpG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.733e-30
Identity = 48/97 (49.48%), Postives = 74/97 (76.29%), Query Frame = 1
Query:  205 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEF 495
            F+AE  +LL +++N+ YS KEIFLRELISN+SDA+DKI + +L+D S    + + FI++  +K ++ L++ D+G+GMTK +L +NLGTIA+SG+  F
Sbjct:    6 FKAESKRLLEMMVNSIYSQKEIFLRELISNASDAIDKIYYRALSDDSITFNKDDYFIKVTANKEDRTLTVSDTGIGMTKEELESNLGTIAKSGSLAF 102          

HSP 2 Score: 51.2174 bits (121), Expect = 2.733e-30
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQ-YVWESQAGGSFTV 658
            +GQFGVGFYSA++VA+KV VTTK   +E  Y WES     +T+
Sbjct:  115 IGQFGVGFYSAFMVADKVTVTTKALGEESGYQWESTGADGYTI 157          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_EHRCJ (Chaperone protein htpG OS=Ehrlichia canis (strain Jake) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.557e-30
Identity = 51/106 (48.11%), Postives = 78/106 (73.58%), Query Frame = 1
Query:  190 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL 507
            +E   F AE+ ++L L+I++ Y+NK+IFLRELISN+SDA DK+R+ESL+++  +D   +  I I  D+    L I D+G+GM + DL++NLGTIA SGT+ F++A+
Sbjct:    7 SEKLKFDAEVGKVLKLVIHSLYTNKDIFLRELISNASDACDKLRYESLSNQDLIDGDTDFKIVISVDQDKNRLYISDNGIGMNRQDLIDNLGTIAHSGTQRFLDAI 112          

HSP 2 Score: 43.8986 bits (102), Expect = 3.557e-30
Identity = 21/50 (42.00%), Postives = 32/50 (64.00%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIV-TTKHNDDEQYVWESQAGGSFTVTRDVSGE 679
            +G+FGVGFYSA++VA +VIV + K  +   Y W S   G F +++   G+
Sbjct:  125 IGKFGVGFYSAFMVASEVIVESRKAGESIGYQWRSAGDGEFIISQLEDGQ 174          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SACD2 (Chaperone protein htpG OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=htpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.557e-30
Identity = 62/117 (52.99%), Postives = 79/117 (67.52%), Query Frame = 1
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIG 537
            ET  F+ E  QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE+L     L+   EL I I  DK  K LSI D+G+GM + +++ NLGTIARSGT +FM  L      D  +IG
Sbjct:    8 ETRGFETEAKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALKQPELLEQDSELKITIDFDKEAKTLSITDNGIGMNRDEVIANLGTIARSGTAQFMANLSGDQKKDSQLIG 124          

HSP 2 Score: 39.6614 bits (91), Expect = 3.557e-30
Identity = 19/45 (42.22%), Postives = 28/45 (62.22%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKH---NDDEQYVWESQAGGSFTV 658
            +GQFGVGFYSA++VA+KV V T+       E   W S+    +++
Sbjct:  123 IGQFGVGFYSAFIVADKVEVLTRRAGSEPSEGVRWVSEGEAEYSI 167          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_DESPS (Chaperone protein htpG OS=Desulfotalea psychrophila GN=htpG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.558e-30
Identity = 57/121 (47.11%), Postives = 81/121 (66.94%), Query Frame = 1
Query:  181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGA--DVSMIG 537
            M E + + FQAE  +LL ++IN+ Y+ +++F+RELISNS+DAL+K+R E+LT +  LD    L I I  D+    L+I DSG+GMT+ +LVNNLG IA SG+  F   L      DV++IG
Sbjct:    1 MTEAKNYEFQAETKKLLDIVINSLYTERDVFVRELISNSADALEKMRHEALTCQEVLDEDLPLEITIDLDEEAHTLTISDSGIGMTEQELVNNLGVIAHSGSGSFYAELAEAVKKDVNLIG 121          

HSP 2 Score: 46.9802 bits (110), Expect = 3.558e-30
Identity = 22/44 (50.00%), Postives = 30/44 (68.18%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQ-YVWESQAGGSFTVT 661
            +GQFGVGFY+A++   KV V T+  D  Q + W S+  GSFT+T
Sbjct:  120 IGQFGVGFYAAFMAGNKVRVQTRSWDGSQGHEWLSEGAGSFTIT 163          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_TREDE (Chaperone protein htpG OS=Treponema denticola GN=htpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.631e-30
Identity = 60/115 (52.17%), Postives = 84/115 (73.04%), Query Frame = 1
Query:  199 FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIG 537
            + F+ E+NQLLSLII++ YSNKEIFLREL+SN+SDALDK+++ +L+D++    + E  I I  D     L++ D+G+GM + DL NNLGTIARSGTK F++ L A    D ++IG
Sbjct:    4 YKFETEVNQLLSLIIHSLYSNKEIFLRELVSNASDALDKLKYLTLSDEAYKQIKFEPRIDICFDDTANTLTVRDTGLGMNEEDLKNNLGTIARSGTKAFLDQLAAADKKDSNLIG 118          

HSP 2 Score: 39.2762 bits (90), Expect = 4.631e-30
Identity = 15/45 (33.33%), Postives = 30/45 (66.67%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKV-IVTTKHNDDEQYVWESQAGGSFTVTR 664
            +GQFGVGFYSA++ A  + +++ K  +++ + W S   G++ + +
Sbjct:  117 IGQFGVGFYSAFMAASTIDVISKKAGENDVWKWTSDGKGAYDLEK 161          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_XANAC (Chaperone protein htpG OS=Xanthomonas axonopodis pv. citri GN=htpG PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.632e-30
Identity = 57/119 (47.90%), Postives = 85/119 (71.43%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIG 537
            + +T  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+RFE+L     L+   EL IR+  DK  + ++I D+G+GM++ D V++LGTIA+SGT +F++ L      D ++IG
Sbjct:    6 DKQTLGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRFEALVKPELLEGSGELRIRVDYDKDARTVTIDDNGIGMSREDAVSHLGTIAKSGTADFLKHLSGDQKKDANLIG 124          

HSP 2 Score: 38.5058 bits (88), Expect = 4.632e-30
Identity = 19/45 (42.22%), Postives = 28/45 (62.22%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHND---DEQYVWESQAGGSFTV 658
            +GQFGVGFYSA++VA++V V ++       E   W S+  G F +
Sbjct:  123 IGQFGVGFYSAFIVADQVDVYSRRAGLPASEGVHWSSRGEGEFEI 167          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_PSYCK (Chaperone protein htpG OS=Psychrobacter cryohalolentis (strain K5) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.027e-30
Identity = 53/107 (49.53%), Postives = 76/107 (71.03%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL 507
            E +   F+AE+ QLL L+ ++ YSN +IF+REL+SN+SDA DK+RFE+  D S  +   EL IRI  D+  K ++  D+G+GM +AD + NLGTIA+SGTK F++ L
Sbjct:   23 ELKKHTFEAEVAQLLHLVTHSLYSNSDIFVRELVSNASDACDKLRFEATNDDSLYEDDGELKIRIAVDEDAKTITFTDNGIGMNEADAIENLGTIAKSGTKAFLDKL 129          

HSP 2 Score: 41.5874 bits (96), Expect = 6.027e-30
Identity = 21/45 (46.67%), Postives = 28/45 (62.22%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTV 658
            +GQFGVGFYS ++VA+ + V T+      D+   W S   GSFTV
Sbjct:  140 IGQFGVGFYSGFIVADTISVETRKAGEPADKGVRWVSDGTGSFTV 184          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_PSYA2 (Chaperone protein htpG OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.028e-30
Identity = 53/107 (49.53%), Postives = 76/107 (71.03%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL 507
            E +   F+AE+ QLL L+ ++ YSN +IF+REL+SN+SDA DK+RFE+  D S  +   EL IRI  D+  K ++  D+G+GM +AD + NLGTIA+SGTK F++ L
Sbjct:   13 ELKKHTFEAEVAQLLHLVTHSLYSNSDIFVRELVSNASDACDKLRFEATNDDSLYEDDGELRIRIAVDEDAKTITFTDNGIGMNEADAIENLGTIAKSGTKAFLDKL 119          

HSP 2 Score: 41.5874 bits (96), Expect = 6.028e-30
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDD--EQYV-WESQAGGSFTV 658
            +GQFGVGFYS ++VA+ + V T+   D  E  V W S   GSFTV
Sbjct:  130 IGQFGVGFYSGFIVADTISVETRKAGDAAENGVRWVSDGTGSFTV 174          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_XANOR (Chaperone protein htpG OS=Xanthomonas oryzae pv. oryzae GN=htpG PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 6.031e-30
Identity = 57/119 (47.90%), Postives = 85/119 (71.43%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIG 537
            + +T  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+RFE+L     L+   EL IR+  DK  + ++I D+G+GM++ D V++LGTIA+SGT +F++ L      D ++IG
Sbjct:    6 DKQTLGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRFEALVKPELLEGSGELRIRVDYDKDARTVTIDDNGIGMSREDAVSHLGTIAKSGTADFLKHLSGDQKKDANLIG 124          

HSP 2 Score: 38.1206 bits (87), Expect = 6.031e-30
Identity = 20/45 (44.44%), Postives = 28/45 (62.22%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHND---DEQYVWESQAGGSFTV 658
            +GQFGVGFYSA++VA++V V ++       E   W S+  G F V
Sbjct:  123 IGQFGVGFYSAFIVADQVDVYSRRAGLPAREGVHWSSRGEGEFEV 167          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_XANOM (Chaperone protein htpG OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.031e-30
Identity = 57/119 (47.90%), Postives = 85/119 (71.43%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIG 537
            + +T  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+RFE+L     L+   EL IR+  DK  + ++I D+G+GM++ D V++LGTIA+SGT +F++ L      D ++IG
Sbjct:    6 DKQTLGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRFEALVKPELLEGSGELRIRVDYDKDARTVTIDDNGIGMSREDAVSHLGTIAKSGTADFLKHLSGDQKKDANLIG 124          

HSP 2 Score: 38.1206 bits (87), Expect = 6.031e-30
Identity = 20/45 (44.44%), Postives = 28/45 (62.22%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHND---DEQYVWESQAGGSFTV 658
            +GQFGVGFYSA++VA++V V ++       E   W S+  G F V
Sbjct:  123 IGQFGVGFYSAFIVADQVDVYSRRAGLPAREGVHWSSRGEGEFEV 167          
The following BLAST results are available for this feature:
BLAST of FC931887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
HTPG_BACHD2.733e-3049.48Chaperone protein htpG OS=Bacillus halodurans GN=h... [more]
HTPG_EHRCJ3.557e-3048.11Chaperone protein htpG OS=Ehrlichia canis (strain ... [more]
HTPG_SACD23.557e-3052.99Chaperone protein htpG OS=Saccharophagus degradans... [more]
HTPG_DESPS3.558e-3047.11Chaperone protein htpG OS=Desulfotalea psychrophil... [more]
HTPG_TREDE4.631e-3052.17Chaperone protein htpG OS=Treponema denticola GN=h... [more]
HTPG_XANAC4.632e-3047.90Chaperone protein htpG OS=Xanthomonas axonopodis p... [more]
HTPG_PSYCK6.027e-3049.53Chaperone protein htpG OS=Psychrobacter cryohalole... [more]
HTPG_PSYA26.028e-3049.53Chaperone protein htpG OS=Psychrobacter arcticus (... [more]
HTPG_XANOR6.031e-3047.90Chaperone protein htpG OS=Xanthomonas oryzae pv. o... [more]
HTPG_XANOM6.031e-3047.90Chaperone protein htpG OS=Xanthomonas oryzae pv. o... [more]

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Properties
Property NameValue
Genbank descriptionC34202C05EF PostHarveN Citrus clementina cDNA clone C34202C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931887 ID=FC931887; Name=FC931887; organism=Citrus clementina; type=EST; length=687bp
GATCGTCAAGTAGAAGCACTGTCTTGAGTTTTCCAATAGAAATCATCAAA
TCAGTTCGTACTCCTACTTCTTCAGCAAACAGCAAACGGCATTTGTATTC
GCTCGTTTTCGTTTTGCTCTGTTTCTTTTTGAACGTTTGGAGTTTTTGAG
TCTGGTCGGGAAACAATGGCTGACGTGCACATGGGAGAAACCGAGACCTT
CGCTTTTCAGGCTGAGATTAATCAGCTTTTAAGCTTGATCATCAATACTT
TTTACAGCAACAAAGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCT
GATGCGCTTGATAAGATCAGATTTGAGAGCTTAACCGACAAGAGCAAGCT
CGATGCTCAGCCAGAGCTTTTCATCAGAATTGTTCCTGACAAAGCCAACA
AGGCACTATCAATCATCGATAGCGGCGTTGGCATGACCAAAGCAGATTTG
GTGAATAACTTGGGAACAATTGCGAGGTCCGGAACAAAGGAGTTTATGGA
GGCATTACAGGCGGGTGCTGACGTAAGCATGATTGGGGCAGTTTGGTGTC
GGGTTCTACTCTGCTTATTTGGTGGCGGAGAAGGTTATTGTGACGACTAA
ACACAATGATGATGAACAATACGTTTGGGAGTCGCAGGCCGGTGGATCTT
TCACTGTTACTAGAGATGTTAGCGGTGAGCCTCTGGG
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