FC931887

Overview
NameFC931887
Unique NameFC931887
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP83_DROSI (Heat shock protein 83 (Fragment) OS=Drosophila simulans GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.478e-64
Identity = 92/117 (78.63%), Postives = 107/117 (91.45%), Query Frame = 1 
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I+++P+K    L+IID+G+GMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIG 120

HSP 2 Score: 83.1889 bits (204), Expect = 2.478e-64
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYLVA+KV VT+K+NDDEQYVWES AGGSFTV  D + EPL
Sbjct:  119 IGQFGVGFYSAYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRAD-NSEPL 168
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP83_DROVI (Heat shock protein 83 (Fragment) OS=Drosophila virilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.478e-64
Identity = 92/117 (78.63%), Postives = 107/117 (91.45%), Query Frame = 1 
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I+++P+K    L+IID+G+GMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIG 120

HSP 2 Score: 83.1889 bits (204), Expect = 2.478e-64
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYLVA+KV VT+K+NDDEQYVWES AGGSFTV  D + EPL
Sbjct:  119 IGQFGVGFYSAYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRAD-NSEPL 168
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 183.726 bits (465), Expect = 3.215e-64
Identity = 92/117 (78.63%), Postives = 106/117 (90.60%), Query Frame = 1 
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+  +L I ++PD+  + L+IID+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:   13 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSCKDLKIELIPDQKERTLTIIDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIG 129

HSP 2 Score: 83.1889 bits (204), Expect = 3.215e-64
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRD 667
            +GQFGVGFYSAYLVAEKV V TKHNDDEQY+WES AGGSFTV  D
Sbjct:  128 IGQFGVGFYSAYLVAEKVTVITKHNDDEQYIWESAAGGSFTVKPD 172
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.215e-64
Identity = 92/117 (78.63%), Postives = 107/117 (91.45%), Query Frame = 1 
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I+++P+K    L+IID+G+GMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIG 120

HSP 2 Score: 82.8037 bits (203), Expect = 3.215e-64
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYLVA+KV VT+K+NDDEQY+WES AGGSFTV  D + EPL
Sbjct:  119 IGQFGVGFYSAYLVADKVTVTSKNNDDEQYIWESSAGGSFTVRAD-NSEPL 168
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 7.127e-64
Identity = 92/117 (78.63%), Postives = 107/117 (91.45%), Query Frame = 1 
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I+++P+K    L+IID+G+GMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIG 120

HSP 2 Score: 81.6481 bits (200), Expect = 7.127e-64
Identity = 38/51 (74.51%), Postives = 45/51 (88.24%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYL+A++V VT+K+NDDEQYVWES AGGSFTV  D + EPL
Sbjct:  119 IGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKAD-NSEPL 168
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP83_DROMI (Heat shock protein 83 (Fragment) OS=Drosophila miranda GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.186e-64
Identity = 92/117 (78.63%), Postives = 107/117 (91.45%), Query Frame = 1 
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I+++P+K    L+IID+G+GMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIG 120

HSP 2 Score: 81.6481 bits (200), Expect = 7.186e-64
Identity = 38/51 (74.51%), Postives = 45/51 (88.24%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYL+A++V VT+K+NDDEQYVWES AGGSFTV  D + EPL
Sbjct:  119 IGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKAD-NSEPL 168
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 9.293e-64
Identity = 91/117 (77.78%), Postives = 104/117 (88.89%), Query Frame = 1 
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   +L I IVP+  +  L+++D+G+GMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDTGKDLKIDIVPNPRDPTLTLLDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIG 127

HSP 2 Score: 87.0409 bits (214), Expect = 9.293e-64
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYLVAEKV+V TKHNDDEQY WES AGGSFTV  D  GEP+
Sbjct:  126 IGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRTD-HGEPI 175
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HS902_HUMAN (Putative heat shock protein HSP 90-alpha A2 OS=Homo sapiens GN=HSP90AA2 PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 5.991e-63
Identity = 91/117 (77.78%), Postives = 106/117 (90.60%), Query Frame = 1 
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKI +ESLTD SKLD+  EL I ++P+K ++ L+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIWYESLTDPSKLDSGKELHINLIPNKQDQTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIG 132

HSP 2 Score: 80.4925 bits (197), Expect = 5.991e-63
Identity = 37/45 (82.22%), Postives = 38/45 (84.44%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRD 667
            +GQFGV FYSAYLVAEKV V TKHNDDEQY WES AGGSFTV  D
Sbjct:  131 IGQFGVSFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD 175
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.765e-63
Identity = 88/117 (75.21%), Postives = 105/117 (89.74%), Query Frame = 1 
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            E ETFAFQAEI QL+SLIINTFYSNKEIFLREL+SN+SDALDKIR+ESLTD +KLD+  +L I I+P+   + L++ID+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:   10 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELVSNASDALDKIRYESLTDPTKLDSGKDLKIDIIPNVQERTLTLIDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIG 126

HSP 2 Score: 84.7297 bits (208), Expect = 7.765e-63
Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV  D  GEP+
Sbjct:  125 IGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVKVD-HGEPI 174
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.722e-62
Identity = 87/119 (73.11%), Postives = 103/119 (86.55%), Query Frame = 1 
Query:  181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            M  TETF F+AEI+QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D   LDA+ +LFIRI PDK NK LSI D+G+GMTK DL+NNLG IA+SGTK+FMEA  +GAD+SMIG
Sbjct:    1 MSNTETFKFEAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPHALDAEKDLFIRITPDKENKILSIRDTGIGMTKNDLINNLGVIAKSGTKQFMEAAASGADISMIG 119

HSP 2 Score: 85.5001 bits (210), Expect = 1.722e-62
Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYLVA+KV V +KHNDDEQY+WES AGGSFTVT D  G  L
Sbjct:  118 IGQFGVGFYSAYLVADKVQVVSKHNDDEQYIWESSAGGSFTVTLDTDGPRL 168
The following BLAST results are available for this feature:
BLAST of FC931887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
HSP83_DROSI2.478e-6478.63Heat shock protein 83 (Fragment) OS=Drosophila sim... [more]
HSP83_DROVI2.478e-6478.63Heat shock protein 83 (Fragment) OS=Drosophila vir... [more]
H90A1_DANRE3.215e-6478.63Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HSP83_DROAV3.215e-6478.63Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_DROPS7.127e-6478.63Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP83_DROMI7.186e-6478.63Heat shock protein 83 (Fragment) OS=Drosophila mir... [more]
HS90B_CHICK9.293e-6477.78Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
HS902_HUMAN5.991e-6377.78Putative heat shock protein HSP 90-alpha A2 OS=Hom... [more]
HS90B_DANRE7.765e-6375.21Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HSP90_SCHPO1.722e-6273.11Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionC34202C05EF PostHarveN Citrus clementina cDNA clone C34202C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931887 ID=FC931887; Name=FC931887; organism=Citrus clementina; type=EST; length=687bp
GATCGTCAAGTAGAAGCACTGTCTTGAGTTTTCCAATAGAAATCATCAAA
TCAGTTCGTACTCCTACTTCTTCAGCAAACAGCAAACGGCATTTGTATTC
GCTCGTTTTCGTTTTGCTCTGTTTCTTTTTGAACGTTTGGAGTTTTTGAG
TCTGGTCGGGAAACAATGGCTGACGTGCACATGGGAGAAACCGAGACCTT
CGCTTTTCAGGCTGAGATTAATCAGCTTTTAAGCTTGATCATCAATACTT
TTTACAGCAACAAAGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCT
GATGCGCTTGATAAGATCAGATTTGAGAGCTTAACCGACAAGAGCAAGCT
CGATGCTCAGCCAGAGCTTTTCATCAGAATTGTTCCTGACAAAGCCAACA
AGGCACTATCAATCATCGATAGCGGCGTTGGCATGACCAAAGCAGATTTG
GTGAATAACTTGGGAACAATTGCGAGGTCCGGAACAAAGGAGTTTATGGA
GGCATTACAGGCGGGTGCTGACGTAAGCATGATTGGGGCAGTTTGGTGTC
GGGTTCTACTCTGCTTATTTGGTGGCGGAGAAGGTTATTGTGACGACTAA
ACACAATGATGATGAACAATACGTTTGGGAGTCGCAGGCCGGTGGATCTT
TCACTGTTACTAGAGATGTTAGCGGTGAGCCTCTGGG
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