FC931887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_MYCLE (Chaperone protein htpG OS=Mycobacterium leprae GN=htpG PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.145e-26 Identity = 53/117 (45.30%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ----PELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADV 525 + E FQAE QLL L++++ YSNK+ FLRELISN+SDALDK+R E+ +K LD + +L I I DK + L++ D+G+GMT+A++V+ +GT+A+SGT + + L A ++ Sbjct: 4 QVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRLEAFRNKD-LDPRTVDTSDLHIEIEVDKNTRILTVRDNGIGMTRAEVVDLIGTLAKSGTAKLRQKLHAAKNL 119 HSP 2 Score: 39.6614 bits (91), Expect = 2.145e-26 Identity = 17/43 (39.53%), Postives = 28/43 (65.12%), Query Frame = 2 Query: 533 LGQFGVGFYSAYLVAEKV-IVTTKHNDDEQYVWESQAGGSFTV 658 +GQFG+GFYS+++VA KV ++T K + W S ++T+ Sbjct: 129 IGQFGIGFYSSFMVANKVELLTRKAGETAATRWSSDGEATYTI 171
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_DESDG (Chaperone protein htpG OS=Desulfovibrio desulfuricans (strain G20) GN=htpG PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.635e-26 Identity = 48/114 (42.11%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 166 MADVHMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL 507 M+ H E F+ E+ +LL +I ++ Y+N+EIFLREL+SN+SDALDK+RF ++ A +L I I ++ + L++ D+G+GMT+ +L++NLGTIA SG++ F++ L Sbjct: 1 MSKEHGAAAEKHEFRTEVRKLLHIITHSLYTNREIFLRELVSNASDALDKLRFAQTRGEAAPAADLDLNIAITVNEETRTLTVSDTGIGMTRQELIDNLGTIASSGSERFLKEL 114 HSP 2 Score: 38.891 bits (89), Expect = 3.635e-26 Identity = 19/42 (45.24%), Postives = 27/42 (64.29%), Query Frame = 2 Query: 533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQ--YVWESQAGGSF 652 +G+FGVGFY+ ++VA+ V VTT+ D + W S GSF Sbjct: 125 IGRFGVGFYAVFMVADSVTVTTRSALDASGAWRWTSDGLGSF 166
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_RHIEC (Chaperone protein htpG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=htpG PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.016e-26 Identity = 44/105 (41.90%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL 507 E+ F+A++ +LL +++++ YS+K +FLRELISN +DA +K+R+E++ S L A E I + D+ ++ L + D+G+GM + +++ LGTIARSGT+ FME + Sbjct: 10 ESHVFEADVARLLHMMVHSVYSDKGVFLRELISNGADACEKLRYEAIETPSLLAADAESRIMLRLDEESRQLVVEDNGIGMRRDEMIEALGTIARSGTRAFMERI 114 HSP 2 Score: 44.669 bits (104), Expect = 8.016e-26 Identity = 19/43 (44.19%), Postives = 30/43 (69.77%), Query Frame = 2 Query: 533 LGQFGVGFYSAYLVAEKV-IVTTKHNDDEQYVWESQAGGSFTV 658 +GQFGVGFYS ++VAE V +++ + +E + W S GS++V Sbjct: 126 IGQFGVGFYSCFMVAEHVDVISRRAGSEEAWKWSSDGKGSYSV 168
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_DESVH (Chaperone protein htpG OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=htpG PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.767e-25 Identity = 51/106 (48.11%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 202 AFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELF--IRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQA 513 AF+ E+ ++L +I ++ Y+N+EIFLREL+SN+SDALDK+RF + + P+L I I DK + L+I D+GVGMT+ +L++NLGTIARSG+++F+ L A Sbjct: 9 AFRTEVRKMLHIITHSLYTNREIFLRELVSNASDALDKLRF--IRSRGDAVVAPDLAPGIDISVDKEARILTIADTGVGMTRQELMDNLGTIARSGSEQFVADLAA 112 HSP 2 Score: 40.4318 bits (93), Expect = 1.767e-25 Identity = 18/44 (40.91%), Postives = 29/44 (65.91%), Query Frame = 2 Query: 533 LGQFGVGFYSAYLVAEKVIVTTKH--NDDEQYVWESQAGGSFTV 658 +G+FGVGFY+ ++VA++V VT++ + + W S G FTV Sbjct: 125 IGRFGVGFYAVFMVADRVEVTSRSYIEGEAAHTWTSDGLGEFTV 168
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: TRAP1_DICDI (TNF receptor-associated protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=trap1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20 Identity = 54/134 (40.30%), Postives = 82/134 (61.19%), Query Frame = 1 Query: 181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKL-DAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGAD-VSMIGAVWCRVLLCLFGG 576 +G +E +FQ E ++L ++ + Y+ KE+F+RELISN+SDA++K+R LT+ S + DA I+I D+ NK L I DSG+GMTK +++ NLG I SG+ +F++ L D S+IG C G Sbjct: 95 IGLSEKLSFQTETQKILHIVAESLYTEKEVFIRELISNASDAIEKVRHTQLTNASMIEDASIPFEIKISTDEDNKTLIIQDSGIGMTKDEMIKNLGKIGYSGSSDFIKKLGENPDKASIIGQFGVGFYSCFMVG 228
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_PORGI (Chaperone protein htpG OS=Porphyromonas gingivalis GN=htpG PE=3 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 1.094e-11 Identity = 30/95 (31.58%), Postives = 56/95 (58.95%), Query Frame = 1 Query: 220 NQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP-ELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFME 501 + + +I YS+ EIFLRE++SN+ DA K++ +LT + + +L + + D+ + +++ D GVGMT+ ++ + IA S +EF+E Sbjct: 12 DNIFPVIKKFLYSDHEIFLREIVSNAVDATQKLK--TLTSVGEFKGETGDLRVTVSVDEVARTITVSDRGVGMTEEEVEKYINQIAFSSAEEFLE 104 HSP 2 Score: 35.039 bits (79), Expect = 1.094e-11 Identity = 16/44 (36.36%), Postives = 25/44 (56.82%), Query Frame = 2 Query: 533 LGQFGVGFYSAYLVAEKVIVTTK--HNDDEQYVWESQAGGSFTV 658 +G FG+GFYSA++V+E+V V T+ D W +T+ Sbjct: 114 IGHFGLGFYSAFMVSERVDVITRSFREDATAVKWSCDGSPEYTL 157
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_PORG3 (Chaperone protein htpG OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=htpG PE=3 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 3.105e-11 Identity = 29/95 (30.53%), Postives = 56/95 (58.95%), Query Frame = 1 Query: 220 NQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP-ELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFME 501 + + +I YS+ +IFLRE++SN+ DA K++ +LT + + +L + + D+ + +++ D GVGMT+ ++ + IA S +EF+E Sbjct: 12 DNIFPVIKKFLYSDHKIFLREIVSNAVDATQKLK--TLTSVGEFKGETGDLRVTVSVDEVARTITVSDRGVGMTEEEVEKYINQIAFSSAEEFLE 104 HSP 2 Score: 35.039 bits (79), Expect = 3.105e-11 Identity = 16/44 (36.36%), Postives = 25/44 (56.82%), Query Frame = 2 Query: 533 LGQFGVGFYSAYLVAEKVIVTTK--HNDDEQYVWESQAGGSFTV 658 +G FG+GFYSA++V+E+V V T+ D W +T+ Sbjct: 114 IGHFGLGFYSAFMVSERVDVITRSFREDATAVKWSCDGSPEYTL 157
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_BACTN (Chaperone protein htpG OS=Bacteroides thetaiotaomicron GN=htpG PE=3 SV=1) HSP 1 Score: 47.7506 bits (112), Expect = 4.031e-11 Identity = 30/99 (30.30%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 226 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGAD 522 + +I YS+ EIFLREL+SN+ DA K+ + + K + +L I + + ++I D G+G+T ++ + IA SG +F+E + A+ Sbjct: 13 IFPIIKKFLYSDHEIFLRELVSNAVDATQKLNTLASIGEFKGEL-GDLTIHV--ELGKDTITISDRGIGLTAEEIEKYINQIAFSGANDFLEKYKDDAN 108 HSP 2 Score: 40.817 bits (94), Expect = 4.031e-11 Identity = 19/44 (43.18%), Postives = 29/44 (65.91%), Query Frame = 2 Query: 533 LGQFGVGFYSAYLVAEKV-IVTTKHNDDEQYV-WESQAGGSFTV 658 +G FG+GFYSA++VA+KV I+T + D+ Q + W FT+ Sbjct: 111 IGHFGLGFYSAFMVAKKVEIITKSYRDEAQAIKWTCDGSPEFTI 154 The following BLAST results are available for this feature:
BLAST of FC931887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931887 ID=FC931887; Name=FC931887; organism=Citrus clementina; type=EST; length=687bpback to top |