FC931887

Overview
NameFC931887
Unique NameFC931887
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.308e-59
Identity = 89/115 (77.39%), Postives = 105/115 (91.30%), Query Frame = 1
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            ETFAFQAEI QL+SLIINTFYSNKEI+LRELISN+SDALDKIR+++LT+ S+LD   ELFI+I P+K  K L+I+D+G+GMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:    6 ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIG 120          

HSP 2 Score: 72.4034 bits (176), Expect = 1.308e-59
Identity = 31/42 (73.81%), Postives = 38/42 (90.48%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTV 658
            +GQFGVGFYSA+LVA+KV+VT+K+NDD+ Y WES AGGSF V
Sbjct:  119 IGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWESSAGGSFVV 160          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.705e-59
Identity = 89/115 (77.39%), Postives = 107/115 (93.04%), Query Frame = 1
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+++LT+ ++L+   EL+I+I P+KA+K L+I+D+G+GMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:    8 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYQALTEPAELETGKELYIKITPNKADKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIG 122          

HSP 2 Score: 71.2478 bits (173), Expect = 1.705e-59
Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTV 658
            +GQFGVGFYSA+LVA+KV+V +KHNDD+ Y WES AGGSF +
Sbjct:  121 IGQFGVGFYSAFLVADKVVVASKHNDDDCYQWESSAGGSFII 162          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.426e-59
Identity = 86/119 (72.27%), Postives = 99/119 (83.19%), Query Frame = 1
Query:  181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            M   ET+ FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D   L++ PELFIR+ P    K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIG
Sbjct:    1 MSSQETYEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPKVLESDPELFIRLTPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIG 119          

HSP 2 Score: 78.1814 bits (191), Expect = 6.426e-59
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGE 679
            +GQFGVGFYS +LVA++V V +KHNDDEQY+WES AGGSFTVT D   E
Sbjct:  118 IGQFGVGFYSLFLVADRVQVISKHNDDEQYIWESNAGGSFTVTLDEVNE 166          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.092e-58
Identity = 86/118 (72.88%), Postives = 103/118 (87.29%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAG-ADVSMIG 537
            + E F FQAEINQL+SLIINTFYSNKE+FLRELISN+SDALDKIR++SLTD S L+++ EL I+I+PDK  K L++IDSG+GMTK D+V NLGTIARSGTK FME LQ+G AD+SMIG
Sbjct:    5 QVERFTFQAEINQLMSLIINTFYSNKEVFLRELISNASDALDKIRYQSLTDASVLESKTELEIKIIPDKTAKTLTLIDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADISMIG 122          

HSP 2 Score: 77.0258 bits (188), Expect = 1.092e-58
Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYLVA+ VIV +K+NDDEQYVWES AGG FT+  D + EPL
Sbjct:  121 IGQFGVGFYSAYLVADTVIVHSKNNDDEQYVWESSAGGEFTIALDHT-EPL 170          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.114e-58
Identity = 86/116 (74.14%), Postives = 100/116 (86.21%), Query Frame = 1
Query:  190 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            +ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D  +L+ +P+LFIRI P    K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIG
Sbjct:    3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIG 118          

HSP 2 Score: 74.7146 bits (182), Expect = 4.114e-58
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGE 679
            +GQFGVGFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D   E
Sbjct:  117 IGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNE 165          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 170.629 bits (431), Expect = 1.550e-57
Identity = 85/115 (73.91%), Postives = 99/115 (86.09%), Query Frame = 1
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR+++L+D  +L+ +P+LFIRI P    K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIG
Sbjct:    4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPKQLETEPDLFIRITPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIG 118          

HSP 2 Score: 73.9442 bits (180), Expect = 1.550e-57
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGE 679
            +GQFGVGFYS +LVA++V V +K+N+DEQY+WES AGGSFTVT D   E
Sbjct:  117 IGQFGVGFYSLFLVADRVQVISKNNEDEQYIWESNAGGSFTVTLDEVNE 165          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.634e-57
Identity = 80/117 (68.38%), Postives = 101/117 (86.32%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            + E +AF A+I+QLLSLIIN FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +IR+  DK N  L+I DSG+GMTKADLVNNLGTIA+SGT+ FMEALQAG+D+SMIG
Sbjct:    9 DQEVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMSMIG 125          

HSP 2 Score: 78.9518 bits (193), Expect = 2.634e-57
Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYLVA+KV V +K+N D+QYVWES A G FTV RD S EPL
Sbjct:  124 IGQFGVGFYSAYLVADKVTVVSKNNADDQYVWESSASGHFTVKRDDSHEPL 174          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.658e-57
Identity = 84/117 (71.79%), Postives = 95/117 (81.20%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ S TD  KL          +P+K    L+IID+G+ MTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct:    4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYXSXTDPXKLXXXXXXXXXXIPNKTAGTLTIIDTGIXMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIG 120          

HSP 2 Score: 81.6481 bits (200), Expect = 2.658e-57
Identity = 38/51 (74.51%), Postives = 45/51 (88.24%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYL+A++V VT+K+NDDEQYVWES AGGSFTV  D + EPL
Sbjct:  119 IGQFGVGFYSAYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKAD-NSEPL 168          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 7.608e-57
Identity = 80/117 (68.38%), Postives = 101/117 (86.32%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 537
            + E +AF A+I+QLLSLIIN FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +IR+  DK N  L+I DSG+GMTKADLVNNLGTIA+SGT+ FMEALQAG+D+SMIG
Sbjct:    9 DQEVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMSMIG 125          

HSP 2 Score: 77.411 bits (189), Expect = 7.608e-57
Identity = 36/51 (70.59%), Postives = 42/51 (82.35%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSAYLVA+KV V +K+N D+QYVWES A G FTV +D S EPL
Sbjct:  124 IGQFGVGFYSAYLVADKVTVVSKNNADDQYVWESTASGHFTVKKDDSHEPL 174          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.320e-49
Identity = 82/116 (70.69%), Postives = 99/116 (85.34%), Query Frame = 1
Query:  172 DVHMGE--TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQA 513
            +VH GE   ETFAFQAEI QL+SLIINTFYSN+EIFL+ELISN+SDALDKIR+ESLTD SKLD+  EL I I+P+   + L+++D+G+GMTKADL+NNL TIA+SGTK  MEALQA
Sbjct:    4 EVHHGEEEVETFAFQAEIAQLISLIINTFYSNEEIFLQELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLALVDTGIGMTKADLINNLRTIAKSGTKACMEALQA 119          

HSP 2 Score: 58.9214 bits (141), Expect = 2.320e-49
Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 2
Query:  569 LVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            L AEK++V TKHNDDEQY WES AGGSFTV  D  GEP+
Sbjct:  117 LQAEKLVVITKHNDDEQYAWESSAGGSFTVHAD-HGEPI 154          
The following BLAST results are available for this feature:
BLAST of FC931887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
HSP90_CAEEL1.308e-5977.39Heat shock protein 90 OS=Caenorhabditis elegans GN... [more]
HSP90_BRUPA1.705e-5977.39Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP82_ASHGO6.426e-5972.27Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSC90_DICDI1.092e-5872.88Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP82_YEAST4.114e-5874.14ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSC82_YEAST1.550e-5773.91ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP90_THEAN2.634e-5768.38Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP83_DROPB2.658e-5771.79Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
HSP90_THEPA7.608e-5768.38Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
H90B3_HUMAN2.320e-4970.69Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionC34202C05EF PostHarveN Citrus clementina cDNA clone C34202C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931887 ID=FC931887; Name=FC931887; organism=Citrus clementina; type=EST; length=687bp
GATCGTCAAGTAGAAGCACTGTCTTGAGTTTTCCAATAGAAATCATCAAA
TCAGTTCGTACTCCTACTTCTTCAGCAAACAGCAAACGGCATTTGTATTC
GCTCGTTTTCGTTTTGCTCTGTTTCTTTTTGAACGTTTGGAGTTTTTGAG
TCTGGTCGGGAAACAATGGCTGACGTGCACATGGGAGAAACCGAGACCTT
CGCTTTTCAGGCTGAGATTAATCAGCTTTTAAGCTTGATCATCAATACTT
TTTACAGCAACAAAGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCT
GATGCGCTTGATAAGATCAGATTTGAGAGCTTAACCGACAAGAGCAAGCT
CGATGCTCAGCCAGAGCTTTTCATCAGAATTGTTCCTGACAAAGCCAACA
AGGCACTATCAATCATCGATAGCGGCGTTGGCATGACCAAAGCAGATTTG
GTGAATAACTTGGGAACAATTGCGAGGTCCGGAACAAAGGAGTTTATGGA
GGCATTACAGGCGGGTGCTGACGTAAGCATGATTGGGGCAGTTTGGTGTC
GGGTTCTACTCTGCTTATTTGGTGGCGGAGAAGGTTATTGTGACGACTAA
ACACAATGATGATGAACAATACGTTTGGGAGTCGCAGGCCGGTGGATCTT
TCACTGTTACTAGAGATGTTAGCGGTGAGCCTCTGGG
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