FC931887

Overview
NameFC931887
Unique NameFC931887
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: ENPL_CHICK (Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.401e-42
Identity = 64/114 (56.14%), Postives = 84/114 (73.68%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVS 528
            ++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL ++I  DK    L + D+G+GMTK +L+ NLGTIA+SGT EF+  +    D S
Sbjct:   71 KSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNMLHVTDTGIGMTKEELIKNLGTIAKSGTSEFLNKMTEMQDDS 184          

HSP 2 Score: 65.0846 bits (157), Expect = 2.401e-42
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSA+LVA++VIVT+KHN+D Q++WES +   F+V  D  G  L
Sbjct:  191 IGQFGVGFYSAFLVADRVIVTSKHNNDTQHIWESDS-NEFSVIDDPRGNTL 240          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 2.402e-42
Identity = 73/131 (55.73%), Postives = 90/131 (68.70%), Query Frame = 1
Query:  148 ESGRETMADVHMGET--ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKL--DAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVS 528
            ES   T A+  + E   E F FQ E+N+L+++IIN+ YS KEIFLRELISN+SDALDKIRF +LT+   L    Q  L I I  DKAN  L I D GVGMTK +LV NLGTIA+SGTKEF++ +   A+ S
Sbjct:   33 ESDGYTEAEAKLIEEKGEKFTFQTEVNKLMNIIINSLYSKKEIFLRELISNASDALDKIRFLALTNADLLGEGEQSNLDIHIKIDKANNVLHITDRGVGMTKDELVRNLGTIAQSGTKEFIKKVSDSAESS 163          

HSP 2 Score: 69.3218 bits (168), Expect = 2.402e-42
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYS +LVA+ V+VT+K NDD+QYVW S +  S+T+ +D  G  L
Sbjct:  166 IGQFGVGFYSLFLVADSVVVTSKSNDDDQYVWTSDSQSSYTIAKDPKGNTL 216          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 3.129e-42
Identity = 62/107 (57.94%), Postives = 82/107 (76.64%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL 507
            ++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL ++I  D+    L + D+GVGMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   72 KSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDREKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178          

HSP 2 Score: 66.6254 bits (161), Expect = 3.129e-42
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSA+LVA+KVIVT+KHN+D Q++WES +   F+V  D  G  L
Sbjct:  192 IGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTL 241          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.378e-39
Identity = 58/99 (58.59%), Postives = 74/99 (74.75%), Query Frame = 1
Query:  211 AEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL 507
            AE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD+  L    EL ++I  DK    L + D+GVGMT+ +LV NLGTIA+SGT EF+  +
Sbjct:    1 AEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDEQALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 99          

HSP 2 Score: 66.6254 bits (161), Expect = 1.378e-39
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPL 685
            +GQFGVGFYSA+LVA+KVIVT+KHN+D Q++WES +   F+V  D  G  L
Sbjct:  113 IGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTL 162          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.797e-39
Identity = 70/120 (58.33%), Postives = 95/120 (79.17%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL-QAG--ADVSMIG 537
            + ET AFQAEINQLLSL+IN+ YS+KEIFLREL+SN+SDALDK+RF ++T+   L  +P L +R++PD+A   L+I D+G+GM+  +LV NLGTIA SG++EF+EAL Q G   D+ +IG
Sbjct:    8 QRETHAFQAEINQLLSLVINSLYSHKEIFLRELVSNASDALDKLRFRAITEPELLADEPALELRLIPDEAKGTLTIEDTGIGMSHDELVKNLGTIAHSGSREFIEALAQKGQQKDMQLIG 127          

HSP 2 Score: 48.521 bits (114), Expect = 1.797e-39
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQ--YVWESQAGGSFTV 658
            +GQFGVGFYSAYLVA++V V ++     Q  + W S+A GSFTV
Sbjct:  126 IGQFGVGFYSAYLVADRVEVVSRAAGQGQSAWRWTSEAKGSFTV 169          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_THICR (Chaperone protein htpG OS=Thiomicrospira crunogena (strain XCL-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.955e-36
Identity = 61/107 (57.01%), Postives = 86/107 (80.37%), Query Frame = 1
Query:  181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFME 501
            M  TET AFQ E+NQLL L+I+  YSNKEIFLREL+SN+SDALDK+RFES+++ +  + + EL I++  DK  + +SIID+G+GMT+ +++ N+GTIA SGTK+F+E
Sbjct:    1 MSHTETHAFQTEVNQLLKLMIHALYSNKEIFLRELVSNASDALDKLRFESVSNDALSEGESELAIQVGFDKEARTVSIIDNGIGMTRDEVIANIGTIANSGTKKFLE 107          

HSP 2 Score: 45.0542 bits (105), Expect = 2.955e-36
Identity = 20/45 (44.44%), Postives = 32/45 (71.11%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKHNDDEQYV---WESQAGGSFTV 658
            +GQFGVGFY++++VA+KV +TT+   D++     WES   G +T+
Sbjct:  120 IGQFGVGFYASFIVADKVTLTTRKAGDDKSEGTRWESAGEGEYTL 164          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_NITEU (Chaperone protein htpG OS=Nitrosomonas europaea GN=htpG PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.849e-36
Identity = 63/117 (53.85%), Postives = 90/117 (76.92%), Query Frame = 1
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
            E   FQAE NQLL L+I++ YSNKEIFLRELISN+SDA DK+RFE L+D +  ++ P+L IRI  DK  + ++IID+G+GM++ +++NN+GTIA+SGT+EF ++L      D ++IG
Sbjct:    8 EHLNFQAEANQLLKLMIHSLYSNKEIFLRELISNASDAADKLRFEGLSDAALYESDPDLKIRIAYDKEARTITIIDNGIGMSRQEVINNIGTIAKSGTREFFDSLTGDQAKDANLIG 124          

HSP 2 Score: 43.8986 bits (102), Expect = 3.849e-36
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKH---NDDEQYVWESQAGGSFTV 658
            +GQFGVGFYSA++VA+KV +TT+      +    WES   G +T+
Sbjct:  123 IGQFGVGFYSAFIVADKVTLTTRRAGLTIEHGVRWESGGEGEYTL 167          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_ROSDO (Chaperone protein htpG OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.509e-36
Identity = 59/117 (50.43%), Postives = 83/117 (70.94%), Query Frame = 1
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIG 537
            ETF+FQ E+ QLL ++  + YSN+EIFLREL+SN+SDA DK+R+E+LT+ S      E  I +  DK  K LS+ D+G+GM   DL++ LGTIARSGT  F++AL++    D+ +IG
Sbjct:    8 ETFSFQTEVGQLLDIVAGSLYSNREIFLRELVSNASDACDKLRYEALTNPSLAQNADEFAISLAVDKKAKTLSVSDNGIGMNHGDLLDTLGTIARSGTGAFLDALKSEEKGDIGLIG 124          

HSP 2 Score: 52.373 bits (124), Expect = 8.509e-36
Identity = 22/43 (51.16%), Postives = 33/43 (76.74%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKV-IVTTKHNDDEQYVWESQAGGSFTV 658
            +GQFGVGFYSA++VAE+V ++T K  +DE ++W S   G F++
Sbjct:  123 IGQFGVGFYSAFMVAERVDVLTRKAGEDESWLWSSDGKGEFSI 165          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.108e-35
Identity = 61/117 (52.14%), Postives = 86/117 (73.50%), Query Frame = 1
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIG 537
            ET  FQ E+ QLLSL+ ++ YSNKE+FLRELISN+SDA DK+RF++L+D S  +   +L +R+V DK N+ L+I D+G+GMT+  ++ +LGTIA+SGT EF + L    G D  +IG
Sbjct:    8 ETHGFQTEVKQLLSLMAHSLYSNKEVFLRELISNASDAADKLRFKALSDASLFENDGQLRVRLVVDKENRTLTISDNGIGMTRDQVIEHLGTIAKSGTAEFFKNLSGDQGRDSQLIG 124          

HSP 2 Score: 48.521 bits (114), Expect = 1.108e-35
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTK--HNDDEQYV-WESQAGGSFTVTRDVSGE 679
            +GQFGVGFYSA++VA+KV V ++      EQ V WES+  GSFTV  DV+ E
Sbjct:  123 IGQFGVGFYSAFIVADKVTVVSRAAGTAPEQGVQWESEGEGSFTVA-DVTKE 173          
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_METFK (Chaperone protein htpG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=htpG1 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.108e-35
Identity = 61/119 (51.26%), Postives = 88/119 (73.95%), Query Frame = 1
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
            + ET  FQAE+ QLL L+I++ YSNKEI LRELISN+SDA DK+RFE+L D S      +L IR+  DK  + ++I D+G+GM++ +++NN+GTIA+SGTKEF+++L      D ++IG
Sbjct:    7 QKETLGFQAEVKQLLQLMIHSLYSNKEIVLRELISNASDAADKLRFEALADNSLYGNDSDLKIRVSFDKQARTITISDNGIGMSREEVINNIGTIAKSGTKEFLQSLTGDQAKDANLIG 125          

HSP 2 Score: 47.7506 bits (112), Expect = 1.108e-35
Identity = 21/43 (48.84%), Postives = 31/43 (72.09%), Query Frame = 2
Query:  533 LGQFGVGFYSAYLVAEKVIVTTKH-NDDEQYVWESQAGGSFTV 658
            +GQFGVGFYSA+++A+KV +TT+    +E   WES   G +T+
Sbjct:  124 IGQFGVGFYSAFIIADKVTLTTRRAGSNEAVRWESTGEGDYTL 166          
The following BLAST results are available for this feature:
BLAST of FC931887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
ENPL_CHICK2.401e-4256.14Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1[more]
ENPL_DICDI2.402e-4255.73Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
ENPL_RAT3.129e-4257.94Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_RABIT1.378e-3958.59Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]
HTPG_MYXXD1.797e-3958.33Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]
HTPG_THICR2.955e-3657.01Chaperone protein htpG OS=Thiomicrospira crunogena... [more]
HTPG_NITEU3.849e-3653.85Chaperone protein htpG OS=Nitrosomonas europaea GN... [more]
HTPG_ROSDO8.509e-3650.43Chaperone protein htpG OS=Roseobacter denitrifican... [more]
HTPG_AERS41.108e-3552.14Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_METFK1.108e-3551.26Chaperone protein htpG OS=Methylobacillus flagella... [more]

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Properties
Property NameValue
Genbank descriptionC34202C05EF PostHarveN Citrus clementina cDNA clone C34202C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931887 ID=FC931887; Name=FC931887; organism=Citrus clementina; type=EST; length=687bp
GATCGTCAAGTAGAAGCACTGTCTTGAGTTTTCCAATAGAAATCATCAAA
TCAGTTCGTACTCCTACTTCTTCAGCAAACAGCAAACGGCATTTGTATTC
GCTCGTTTTCGTTTTGCTCTGTTTCTTTTTGAACGTTTGGAGTTTTTGAG
TCTGGTCGGGAAACAATGGCTGACGTGCACATGGGAGAAACCGAGACCTT
CGCTTTTCAGGCTGAGATTAATCAGCTTTTAAGCTTGATCATCAATACTT
TTTACAGCAACAAAGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCT
GATGCGCTTGATAAGATCAGATTTGAGAGCTTAACCGACAAGAGCAAGCT
CGATGCTCAGCCAGAGCTTTTCATCAGAATTGTTCCTGACAAAGCCAACA
AGGCACTATCAATCATCGATAGCGGCGTTGGCATGACCAAAGCAGATTTG
GTGAATAACTTGGGAACAATTGCGAGGTCCGGAACAAAGGAGTTTATGGA
GGCATTACAGGCGGGTGCTGACGTAAGCATGATTGGGGCAGTTTGGTGTC
GGGTTCTACTCTGCTTATTTGGTGGCGGAGAAGGTTATTGTGACGACTAA
ACACAATGATGATGAACAATACGTTTGGGAGTCGCAGGCCGGTGGATCTT
TCACTGTTACTAGAGATGTTAGCGGTGAGCCTCTGGG
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