FC931887
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHEDO (Chaperone protein htpG OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=htpG PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.443e-35 Identity = 59/121 (48.76%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
M + ET FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LTD + + EL +R+ DK ++I D+G+GMT+ ++ +LGTIA+SGTKEF L +A D +IG
Sbjct: 1 MSQQETHGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTDDALYEGDGELRVRVSTDKEKGTVTISDNGIGMTRDSVIEHLGTIAKSGTKEFFNNLSGEANKDSQLIG 121 HSP 2 Score: 51.9878 bits (123), Expect = 1.443e-35 Identity = 27/54 (50.00%), Postives = 38/54 (70.37%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSF---TVTRDVSG 676
+GQFGVGFYSA++VA+KV V T+ H +E +WES+ GSF T+T++ G
Sbjct: 120 IGQFGVGFYSAFIVAKKVTVRTRAAGHPANEGVLWESEGEGSFNVETITKNSRG 173
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHESW (Chaperone protein htpG OS=Shewanella sp. (strain W3-18-1) GN=htpG PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.443e-35 Identity = 59/121 (48.76%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
M + ET FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ + + EL +RI DK ++I D+GVGMT+ ++ +LGTIA+SGT EF + L +A D +IG
Sbjct: 1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKDKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIG 121 HSP 2 Score: 56.6102 bits (135), Expect = 1.443e-35 Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTV 658
+GQFGVGFYSA++VA+KV V T+ H DE +WES+ GSFTV
Sbjct: 120 IGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGSFTV 164
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPC (Chaperone protein htpG OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=htpG PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.443e-35 Identity = 59/121 (48.76%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
M + ET FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ + + EL +RI DK ++I D+GVGMT+ ++ +LGTIA+SGT EF + L +A D +IG
Sbjct: 1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKDKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIG 121 HSP 2 Score: 56.6102 bits (135), Expect = 1.443e-35 Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTV 658
+GQFGVGFYSA++VA+KV V T+ H DE +WES+ GSFTV
Sbjct: 120 IGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGSFTV 164
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.880e-35 Identity = 61/117 (52.14%), Postives = 86/117 (73.50%), Query Frame = 1
Query: 193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIG 537
ET FQ E+ QLLSL+ ++ YSNKE+FLRELISN+SDA DK+RF++L+D S + +L +R+V DK N+ L+I D+G+GMT+ ++ +LGTIA+SGT EF + L G D +IG
Sbjct: 8 ETHGFQTEVKQLLSLMAHSLYSNKEVFLRELISNASDAADKLRFKALSDASLFENDGQLRVRLVVDKENRTLTISDNGIGMTRDQVIEHLGTIAKSGTAEFFKNLSGDQGRDSQLIG 124 HSP 2 Score: 47.7506 bits (112), Expect = 1.880e-35 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTK--HNDDEQYV-WESQAGGSFTV 658
+GQFGVGFYSA++VA+KV V ++ EQ V WES+ GSFTV
Sbjct: 123 IGQFGVGFYSAFIVADKVTVVSRAAGTAPEQGVQWESEGEGSFTV 167
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_DESHY (Chaperone protein htpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.450e-35 Identity = 62/122 (50.82%), Postives = 90/122 (73.77%), Query Frame = 1
Query: 181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL-QAG--ADVSMIG 537
M + ET FQ EI QLL ++IN+ Y+++EIFLRELISN++DA +K+R+ L+ ++ D + L IRI PD+ K L+I D+G+GMTK DL+ N+GTIA SG+K F++ L +AG DV++IG
Sbjct: 1 MSQIETKEFQTEIRQLLDIVINSLYTDREIFLRELISNAADASEKVRYMQLSGQNVKDQELPLEIRITPDENAKTLTIADAGIGMTKEDLIENIGTIAHSGSKAFVQRLAEAGDKKDVNLIG 122 HSP 2 Score: 50.447 bits (119), Expect = 2.450e-35 Identity = 22/48 (45.83%), Postives = 36/48 (75.00%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTK--HNDDEQYVWESQAGGSFTVTRDV 670
+GQFGVGFYSA++VA+KV +T++ D + Y WES GS++++ ++
Sbjct: 121 IGQFGVGFYSAFMVADKVSLTSRSYEPDAQGYRWESDGRGSYSISEEM 168
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHESR (Chaperone protein htpG OS=Shewanella sp. (strain MR-7) GN=htpG PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.155e-35 Identity = 59/121 (48.76%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
M + ET FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ + + EL +RI DK ++I D+GVGMT+ ++ +LGTIA+SGT EF + L +A D +IG
Sbjct: 1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIG 121 HSP 2 Score: 54.6842 bits (130), Expect = 4.155e-35 Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTV 658
+GQFGVGFYSA++VA+KV V T+ H +E +WES+ GSFTV
Sbjct: 120 IGQFGVGFYSAFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTV 164
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHESM (Chaperone protein htpG OS=Shewanella sp. (strain MR-4) GN=htpG PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.155e-35 Identity = 59/121 (48.76%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
M + ET FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ + + EL +RI DK ++I D+GVGMT+ ++ +LGTIA+SGT EF + L +A D +IG
Sbjct: 1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIG 121 HSP 2 Score: 54.6842 bits (130), Expect = 4.155e-35 Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTV 658
+GQFGVGFYSA++VA+KV V T+ H +E +WES+ GSFTV
Sbjct: 120 IGQFGVGFYSAFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTV 164
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHESA (Chaperone protein htpG OS=Shewanella sp. (strain ANA-3) GN=htpG PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.155e-35 Identity = 59/121 (48.76%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
M + ET FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ + + EL +RI DK ++I D+GVGMT+ ++ +LGTIA+SGT EF + L +A D +IG
Sbjct: 1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIG 121 HSP 2 Score: 54.6842 bits (130), Expect = 4.155e-35 Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTV 658
+GQFGVGFYSA++VA+KV V T+ H +E +WES+ GSFTV
Sbjct: 120 IGQFGVGFYSAFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTV 164
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHEON (Chaperone protein htpG OS=Shewanella oneidensis GN=htpG PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.155e-35 Identity = 59/121 (48.76%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
M + ET FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ + + EL +RI DK ++I D+GVGMT+ ++ +LGTIA+SGT EF + L +A D +IG
Sbjct: 1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIG 121 HSP 2 Score: 54.6842 bits (130), Expect = 4.155e-35 Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTV 658
+GQFGVGFYSA++VA+KV V T+ H +E +WES+ GSFTV
Sbjct: 120 IGQFGVGFYSAFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTV 164
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_BURCH (Chaperone protein htpG OS=Burkholderia cenocepacia (strain HI2424) GN=htpG PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.155e-35 Identity = 64/117 (54.70%), Postives = 85/117 (72.65%), Query Frame = 1
Query: 193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIG 537
ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE L D + + P L IRI DKA + ++I D+G+GM++ + + NLGTIARSGTKEF L D ++IG
Sbjct: 4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYENDPNLRIRIGYDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLSGDQQKDAALIG 120 HSP 2 Score: 45.0542 bits (105), Expect = 4.155e-35 Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTKHND---DEQYVWESQAGGSFTV 658
+GQFGVGFYS ++VA+K+ V T+ +E WES G FT+
Sbjct: 119 IGQFGVGFYSGFIVADKITVETRRAGLPANEAVRWESAGEGDFTI 163 The following BLAST results are available for this feature:
BLAST of FC931887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931887 ID=FC931887; Name=FC931887; organism=Citrus clementina; type=EST; length=687bpback to top |