FC931914

Overview
NameFC931914
Unique NameFC931914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.642e-26
Identity = 63/136 (46.32%), Postives = 87/136 (63.97%), Query Frame = 2
Query:  266 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 673
            KTKIVCT+GPAS S  +LE+L+ AGMNVAR NFSHG H   +  ++++R        +  ++LDTKGPEIRT  + +GK ++L  GQ+I +S     +GN ++ ++SY KL  DV  G+ IL  DG I L V   D
Sbjct:    3 KTKIVCTIGPASESPELLEQLIEAGMNVARLNFSHGNHAEHKARIDSIRKVAREKGKVVGILLDTKGPEIRTHSMMNGK-LELVTGQKIDISMT-QVEGNNDVFSVSYDKLIEDVNEGSVILLDDGLIQLEVTGKD 136          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK_CHICK (Pyruvate kinase muscle isozyme OS=Gallus gallus GN=PKM2 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25
Identity = 69/165 (41.82%), Postives = 102/165 (61.82%), Query Frame = 2
Query:  203 AMANIDIEGLLR-DVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHN------TQILCAVMLDTKGPEIRTGFLKDG--KPIQLKEGQEITVSTDYDFKGN--EEMITMSYKKLPVDVKPGNTILCADGTITLTV 661
            AMA+  +E + R D+ ++  + + T I+CT+GPASRSV  L++++++GMNVAR NFSHGTHEY + T+ N+R A  +      T    A+ LDTKGPEIRTG +K      ++LK+G  + V+ D  F  N  E ++ + YK L   +  G+ I   DG I+L V
Sbjct:   20 AMADTFLEHMCRLDIDSEPTIARNTGIICTIGPASRSVDKLKEMIKSGMNVARLNFSHGTHEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMENCDENVLWVDYKNLIKVIDVGSKIYVDDGLISLLV 184          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYM_MOUSE (Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4)

HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25
Identity = 67/141 (47.52%), Postives = 92/141 (65.25%), Query Frame = 2
Query:  269 TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 661
            T I+CT+GPASRSV ML++++++GMNVAR NFSHGTHEY  ET+ N+R A     +  IL    AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V+ G+ I   DG I+L V
Sbjct:   45 TGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVREATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQV 185          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK_LEIME (Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25
Identity = 62/148 (41.89%), Postives = 90/148 (60.81%), Query Frame = 2
Query:  272 KIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDF--KGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPNLELSAAVVRT 709
            +I+CT+GP+++SV  L+ L+++GM+VAR NFSHG+HEY Q T+NN+R A     +  A+ LDTKGPEIRTG    G  + ++ G    V+TD  F  KG ++   + Y+ L   V+PGN I   DG + L V S +    L   V  +
Sbjct:   23 RIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQFVGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTVTNS 169          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYM_FELCA (Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.250e-25
Identity = 70/165 (42.42%), Postives = 103/165 (62.42%), Query Frame = 2
Query:  203 AMANIDIEGLLR-DVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHN------TQILCAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 661
            AMA+  +E + R D+ +     + T I+CT+GPASRSV +L++++++GMNVAR NFSHGTHEY  ET+ N+RAA  +           AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V+ G+ +   DG I+L V
Sbjct:   21 AMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVEILKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPIRYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENVLWLDYKNICKVVEVGSKVYVDDGLISLLV 185          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYM_PONAB (Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2 PE=2 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.066e-24
Identity = 72/165 (43.64%), Postives = 103/165 (62.42%), Query Frame = 2
Query:  203 AMANIDIEGLLR-DVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 661
            AMA+  +E + R D+ +     + T I+CT+GPASRSV  L++++++GMNVAR NFSHGTHEY  ET+ N+R A     +  IL    AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V+ G+ I   DG I+L V
Sbjct:   21 AMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQV 185          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYM_HUMAN (Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4)

HSP 1 Score: 113.62 bits (283), Expect = 1.066e-24
Identity = 72/165 (43.64%), Postives = 103/165 (62.42%), Query Frame = 2
Query:  203 AMANIDIEGLLR-DVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 661
            AMA+  +E + R D+ +     + T I+CT+GPASRSV  L++++++GMNVAR NFSHGTHEY  ET+ N+R A     +  IL    AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V+ G+ I   DG I+L V
Sbjct:   21 AMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQV 185          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYM_RABIT (Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuniculus GN=PKM2 PE=1 SV=4)

HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24
Identity = 66/147 (44.90%), Postives = 92/147 (62.59%), Query Frame = 2
Query:  269 TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPN 679
            T I+CT+GPASRSV  L++++++GMNVAR NFSHGTHEY  ET+ N+R A     +  IL    AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V  G+ +   DG I+L V    P+
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPD 191          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK_SCHPO (Pyruvate kinase OS=Schizosaccharomyces pombe GN=pyk1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24
Identity = 63/155 (40.65%), Postives = 91/155 (58.71%), Query Frame = 2
Query:  239 DVPNDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLR-AAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLS--CDPNLEL 688
            D+P   R  +T I+CT+GP S +V  L KL  AGMN+ R NFSHG++EY Q  ++N R A+  N     A+ LDTKGPEIRTG    G    +  G E+  +TD  Y  K N++++ + YK +   ++PG  I   DG ++ TV+    D NL++
Sbjct:   20 DIPAVNR--RTSIICTIGPKSNNVETLCKLRDAGMNIVRMNFSHGSYEYHQSVIDNARKASATNPLFPLAIALDTKGPEIRTGLTVGGTDYPISSGHEMIFTTDDAYAEKCNDKVMYIDYKNITKVIQPGRIIYVDDGILSFTVIEKVDDKNLKV 172          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYR_HUMAN (Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PKLR PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23
Identity = 67/170 (39.41%), Postives = 101/170 (59.41%), Query Frame = 2
Query:  203 AMANIDIEGL-LRDVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHN------TQILCAVMLDTKGPEIRTGFLKDG--KPIQLKEGQEITVSTDYDF--KGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDP 676
            AMA+  +E L L D+ ++    + T I+ T+GPASRSV  L+++++AGMN+AR NFSHG+HEY  E++ N+R A+ +      +    A+ LDTKGPEIRTG L+ G    ++L +G ++ V+ D  F  +GN   + + Y  +   V  G  I   DG I+L V    P
Sbjct:   64 AMADTFLEHLCLLDIDSEPVAARSTSIIATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVREAVESFAGSPLSYRPVAIALDTKGPEIRTGILQGGPESEVELVKGSQVLVTVDPAFRTRGNANTVWVDYPNIVRVVPVGGRIYIDDGLISLVVQKIGP 233          
The following BLAST results are available for this feature:
BLAST of FC931914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
KPYK_BACPY9.642e-2646.32Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYK_CHICK2.805e-2541.82Pyruvate kinase muscle isozyme OS=Gallus gallus GN... [more]
KPYM_MOUSE3.664e-2547.52Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=... [more]
KPYK_LEIME4.785e-2541.89Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1... [more]
KPYM_FELCA6.250e-2542.42Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 ... [more]
KPYM_PONAB1.066e-2443.64Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2... [more]
KPYM_HUMAN1.066e-2443.64Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=... [more]
KPYM_RABIT1.818e-2444.90Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuni... [more]
KPYK_SCHPO9.025e-2440.65Pyruvate kinase OS=Schizosaccharomyces pombe GN=py... [more]
KPYR_HUMAN1.539e-2339.41Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PK... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34202E09EF PostHarveN Citrus clementina cDNA clone C34202E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931914 ID=FC931914; Name=FC931914; organism=Citrus clementina; type=EST; length=720bp
GAGACTGACCGCGAGCGGCAACGTTAAAAATCTTGCAGCTAACGCGAGCA
ACCACGCGTCCATCATGACCCACGTACTCAAAGTCGCCCATTGTTTAACG
CCACTCCACACTTTTCCTTTTAATAGTAGCAGGCTAGTGGCAATAGGTCA
CTAGTAACCAGTCAGATATATTCGTTATTGTGAACTAGACTTGATAAGGT
AAGCTATGGCGAACATAGATATAGAGGGACTCTTGAGAGATGTGCCAAAT
GATAAGCGGTTGCCGAAGACGAAGATTGTGTGTACTTTAGGTCCTGCTTC
CCGTTCTGTGCCGATGCTTGAGAAGCTTCTGAGGGCTGGAATGAATGTTG
CTCGTTTCAATTTCTCTCACGGTACGCACGAGTATCAGCAGGAGACTTTG
AACAATCTCAGAGCTGCCATGCACAACACCCAGATCCTCTGTGCTGTCAT
GCTCGATACCAAGGGACCTGAGATTCGAACTGGTTTCCTTAAGGATGGAA
AACCCATACAACTTAAAGAAGGTCAGGAAATTACTGTATCTACTGATTAC
GACTTCAAGGGTAATGAAGAAATGATCACCATGAGCTACAAGAAGCTGCC
TGTGGATGTGAAGCCTGGAAATACCATCTTGTGTGCTGATGGCACCATTA
CCCTGACTGTCTTGTCTTGTGATCCAAATCTGGAACTGTCAGCTGCCGTT
GTGAGAACACTGCATGCTAG
back to top