FC931914

Overview
NameFC931914
Unique NameFC931914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK1_YEAST (Pyruvate kinase 1 OS=Saccharomyces cerevisiae GN=PYK1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 49/151 (32.45%), Postives = 83/151 (54.97%), Query Frame = 2
Query:  260 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA--MHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSC--DPNLELSA 694
            L +T I+ T+GP + +   L  L +AG+N+ R NFSHG++EY +  ++N R +  ++  + L A+ LDTKGPEIRTG   +     +    E+  +TD  Y    +++++ + YK +   +  G  I   DG ++  VL    D  L++ A
Sbjct:   18 LRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPL-AIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVVDDKTLKVKA 167          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK1_CANGA (Pyruvate kinase 1 OS=Candida glabrata GN=PYK1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 46/141 (32.62%), Postives = 79/141 (56.03%), Query Frame = 2
Query:  254 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA--MHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 664
            + L +T I+ T+GP + +   L  L +AG+N+ R NFSHG++EY +  ++N R +  ++  + L A+ LDTKGPEIRTG   +     +    E+  +TD  Y    +++++ + YK +   +  G  I   DG ++  VL
Sbjct:   17 EELRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPL-AIALDTKGPEIRTGTTTNEVDYPIPPNHEMIFTTDDKYAKACDDKIMYLDYKNITKVISAGRIIYVDDGVLSFEVL 156          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK_SACCA (Pyruvate kinase OS=Saccharomyces castellii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14
Identity = 47/139 (33.81%), Postives = 76/139 (54.68%), Query Frame = 2
Query:  260 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA--MHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTD--YDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 664
            L +T I+ T+GP + +  +L  L +AG+N+ R NFSHG++EY Q  + N R +  ++  + L A+ LDTKGPEIRTG         +    E+  STD  Y    +++++ + Y  +   +  G  I   DG ++  VL
Sbjct:   19 LRRTSIIGTIGPKTNNPEVLVALRKAGLNIVRMNFSHGSYEYHQSVIENARKSEELYPGRPL-AIALDTKGPEIRTGTTTGEVDYPIPPNHEMIFSTDEKYAKACDDKVMFVDYANITKVISKGKIIYVDDGVLSFEVL 156          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK_BUCBP (Pyruvate kinase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=pykA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13
Identity = 46/138 (33.33%), Postives = 72/138 (52.17%), Query Frame = 2
Query:  254 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLS 667
            +R  +TKIV TLGP++ +  +LE ++++G+NV R NFSHGT E        + +         A++ D +GP+IR    +D K         I  +   +  G  E + + YK LP DVK  + +L  DG I L V++
Sbjct:    3 RRFRRTKIVATLGPSTDNHIILENMIKSGVNVFRLNFSHGTREEHIYRAKLVTSIAKRLNCHIALLGDLQGPKIRICKFQDKKVFLKVNNYFILDANLNENLGTSERVGIDYKNLPKDVKKCDILLLDDGKIQLKVIN 140          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK_ENCCU (Pyruvate kinase OS=Encephalitozoon cuniculi GN=PYK1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 2
Query:  257 RLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEI--RTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCD 673
            R+  TKIVCT+GP + S   +++L+ AGM++AR NFSHG+ E   E + N+R +        ++ LDT+GPE+  RT  +KD K     EG E+   +    + +  +  +  K L VD    N +   DG I L V++ +
Sbjct:   93 RMVLTKIVCTIGPRTSSREKIKELIDAGMSIARLNFSHGSREAHLEVIRNIRDSRSGAGRHVSIALDTRGPEVRLRTPEMKDIK----VEGGEVLRFSLLSSEKDIWIPGVDLKSLGVD----NRVFIDDGAIELRVVNVE 225          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK2_AGRVI (Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 47/135 (34.81%), Postives = 69/135 (51.11%), Query Frame = 2
Query:  266 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEM--ITMSYKKLPVDVKPGNTILCADGTITLTVL 664
            ++KIV T+GPAS S  ML  L  AG++  R NFSHG      E   N+RA         AV+ D +GP+IR G L  G+ + L  G   T+      +G E M  I + ++++     PG  +L  DG I + ++
Sbjct:    8 RSKIVATVGPASSSPDMLRSLFLAGVDTFRLNFSHGARADHAEVYRNIRALEQEHDAAIAVLQDLQGPKIRIGVLAHGR-LDLARGS--TIGFILGREGGEGMNDIPLPHREIFEVAVPGMDLLIDDGRIKVRIM 139          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK_METEA (Pyruvate kinase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=pyk PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12
Identity = 44/136 (32.35%), Postives = 71/136 (52.21%), Query Frame = 2
Query:  254 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTV 661
            KR  +TKIV TLGPAS +  M+EKL  AG +V R N SH   E   E +  +R      +    +++D +GP++R G    G    L+ GQ   + +D    G+ + + + + ++   ++P + IL  DG + L V
Sbjct:    2 KRSRRTKIVATLGPASDTPEMIEKLFHAGADVFRINMSHLAREKLPERIEVIRTIEREAKRPIGILVDLQGPKLRLGTFV-GDAAVLENGQTFVLDSD-PTPGDTDRVFLPHPEILSALEPSHGILIDDGKLRLIV 135          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK1_AGRVI (Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12
Identity = 42/133 (31.58%), Postives = 69/133 (51.88%), Query Frame = 2
Query:  266 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVL 664
            + KIV T+GPAS S  +L  L  AG++  R NFSHG+ +       ++RA          ++ D +GP+IR G L +G+ +QL +  EI      +       I + ++++   VKPG+ +L  DG + +  L
Sbjct:    8 RAKIVATVGPASSSPAILRSLFLAGVDTFRLNFSHGSRDDHAAAYRHIRALEKELGTSIGILQDLQGPKIRIGVLHEGR-LQLTKDAEIRFVCGTEPGRGLMDIPLPHREIFAAVKPGDDLLIDDGRVRVRAL 139          
BLAST of FC931914 vs. ExPASy Swiss-Prot
Match: KPYK_MYCGE (Pyruvate kinase OS=Mycoplasma genitalium GN=pyk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11
Identity = 53/176 (30.11%), Postives = 80/176 (45.45%), Query Frame = 2
Query:  260 LPKTKIVCTLGPASR----SVPML----------------EKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMS----YKKLPVDVKPGNTILCADGTITLTVLSCDPNLELSAAVVRTLH 715
            L +TKI+ T GPA      S+ ML                E ++++G++V R NFSHGTHE QQ  +  +R       I  ++MLDT GPEIR    K  + +++ +  E+ ++T      ++    +S       +  DV  G  IL  DG +TL V   D        V +  H
Sbjct:    5 LKRTKIIATCGPALTKSLVSLKMLDDNEYAAIKKVAYANIEAIIKSGVSVIRLNFSHGTHEEQQVRIKIVRDVAKAMNIPVSIMLDTNGPEIRIVETKK-EGLKITKDSEVIINTMSKMIASDNQFAVSDASGKYNMVNDVNIGQKILVDDGKLTLVVTRVDKQHNQVICVAKNDH 179          
The following BLAST results are available for this feature:
BLAST of FC931914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
KPYK1_YEAST1.306e-1432.45Pyruvate kinase 1 OS=Saccharomyces cerevisiae GN=P... [more]
KPYK1_CANGA1.306e-1432.62Pyruvate kinase 1 OS=Candida glabrata GN=PYK1 PE=3... [more]
KPYK_SACCA2.228e-1433.81Pyruvate kinase OS=Saccharomyces castellii GN=PYK1... [more]
KPYK_BUCBP2.463e-1333.33Pyruvate kinase OS=Buchnera aphidicola subsp. Baiz... [more]
KPYK_ENCCU7.167e-1334.75Pyruvate kinase OS=Encephalitozoon cuniculi GN=PYK... [more]
KPYK2_AGRVI2.724e-1234.81Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=... [more]
KPYK_METEA6.068e-1232.35Pyruvate kinase OS=Methylobacterium extorquens (st... [more]
KPYK1_AGRVI7.924e-1231.58Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=... [more]
KPYK_MYCGE3.011e-1130.11Pyruvate kinase OS=Mycoplasma genitalium GN=pyk PE... [more]

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Properties
Property NameValue
Genbank descriptionC34202E09EF PostHarveN Citrus clementina cDNA clone C34202E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931914 ID=FC931914; Name=FC931914; organism=Citrus clementina; type=EST; length=720bp
GAGACTGACCGCGAGCGGCAACGTTAAAAATCTTGCAGCTAACGCGAGCA
ACCACGCGTCCATCATGACCCACGTACTCAAAGTCGCCCATTGTTTAACG
CCACTCCACACTTTTCCTTTTAATAGTAGCAGGCTAGTGGCAATAGGTCA
CTAGTAACCAGTCAGATATATTCGTTATTGTGAACTAGACTTGATAAGGT
AAGCTATGGCGAACATAGATATAGAGGGACTCTTGAGAGATGTGCCAAAT
GATAAGCGGTTGCCGAAGACGAAGATTGTGTGTACTTTAGGTCCTGCTTC
CCGTTCTGTGCCGATGCTTGAGAAGCTTCTGAGGGCTGGAATGAATGTTG
CTCGTTTCAATTTCTCTCACGGTACGCACGAGTATCAGCAGGAGACTTTG
AACAATCTCAGAGCTGCCATGCACAACACCCAGATCCTCTGTGCTGTCAT
GCTCGATACCAAGGGACCTGAGATTCGAACTGGTTTCCTTAAGGATGGAA
AACCCATACAACTTAAAGAAGGTCAGGAAATTACTGTATCTACTGATTAC
GACTTCAAGGGTAATGAAGAAATGATCACCATGAGCTACAAGAAGCTGCC
TGTGGATGTGAAGCCTGGAAATACCATCTTGTGTGCTGATGGCACCATTA
CCCTGACTGTCTTGTCTTGTGATCCAAATCTGGAACTGTCAGCTGCCGTT
GTGAGAACACTGCATGCTAG
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