FC932022

Overview
NameFC932022
Unique NameFC932022
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932022 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 3.989e-37
Identity = 85/210 (40.48%), Postives = 119/210 (56.67%), Query Frame = 2
Query:    2 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAVISSKEIDDSIDRIVAGMEGTVMTDGKSK 631
            KTLLAKA+A E+   F  +  SEF + FVG GA  VR++F+ A+  AP IVF+DEIDA+             E ++TL QLL E+DGF+    + +IAATNR DILD ALLRPGRFDR + V +P+  GR EI +++    K D ++  D++A  T GFSG               R G+  ++  ++  +I++I A       TD   K
Sbjct:  181 KTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNKAKNTDRTEK 390          
BLAST of FC932022 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.989e-37
Identity = 82/195 (42.05%), Postives = 118/195 (60.51%), Query Frame = 2
Query:    2 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAVISSKEIDDSIDRI 586
            KT+LAKA+A E+   F  +  SEF + FVG GA  VR+LF+ AK  AP I+F+DEIDA+             E ++TL QLL E+DGF     + +IAATNR DILD ALLRPGRFDR + V +PD RGRTEI  ++    K + +++L++++  + GFSG               R G+  ++ K++ ++I +I
Sbjct:  181 KTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVNAITKI 375          
BLAST of FC932022 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.887e-37
Identity = 84/200 (42.00%), Postives = 114/200 (57.00%), Query Frame = 2
Query:    2 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAVISSKEIDDSIDRIVAGME 601
            KTLLAKA+A  A   F  ++  E V+ F+G GA  VR+LF+ A+E AP I+F+DEIDA+           + E ++TL QLL EMDGF+    I VIAATNR DILD ALLRPGRFDR + + +PD  GR EI K+H  +     DV L  +A  T G SG               R  + +++  +   ++DR++   E
Sbjct:  226 KTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGKKE 425          
BLAST of FC932022 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.516e-36
Identity = 90/218 (41.28%), Postives = 120/218 (55.05%), Query Frame = 2
Query:    2 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAVISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEV 655
            KTL+AKA+A      F  + GSE V  F+G GA  V +LF+ AKE AP I+F+DEIDA+             E  +TL QLL EMDGF+    + VIAATNR DILD ALLRPGRFDR + V +PD RGR EILKVH + K    +V L +IA  T G SG               R  +  ++ ++   ++D+++         + +    +A HEV
Sbjct:  185 KTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVH-TRKMNLRNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVLG-------AEKRLAQAIAMHEV 394          
BLAST of FC932022 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.411e-36
Identity = 83/196 (42.35%), Postives = 115/196 (58.67%), Query Frame = 2
Query:    2 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAVISSKEIDDSIDRIV 589
            KTLLAKA+A E    F  I  SEFV  ++G GA  VR +F+ AKE +P I+F+DEIDAV           + E ++TL QLL E+DGFE    + ++AATNR DILD ALLRPGRFDR + V +P+  GR EILK+H S      +V ++++A  T G SG               R  +  ++  +  D++D+I+
Sbjct:  198 KTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIM 393          
BLAST of FC932022 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.760e-36
Identity = 86/196 (43.88%), Postives = 112/196 (57.14%), Query Frame = 2
Query:    2 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAVISSKEIDDSIDRIV 589
            KTL+AKA+A E    F  + GSE V  ++G GA  V +LF+ AKE AP I+F+DEIDA+             E  +TL QLL EMDGF+    + VIAATNR DILD ALLRPGRFDR + V +PD  GR EILKVH    K   +V L VIA  T G SG               R  +  ++ ++   ++D+++
Sbjct:  187 KTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVL 381          
BLAST of FC932022 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.760e-36
Identity = 84/200 (42.00%), Postives = 114/200 (57.00%), Query Frame = 2
Query:    2 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAVISSKEIDDSIDRIVAGME 601
            KTLLAKA+A E    F  + GSE V+ F+G GA  VRD+FK AKE +PCI+F+DEIDAV           + E ++TL QLL EMDGF+    + +IAATNR DILD A+LRPGRFDR + +  PD  GR EI K+H ++K     V L  IA       G               R G+  +++K+  +++ ++    E
Sbjct:  195 KTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIH-TDKMNIKSVDLREIAKMAENMVGADIKAVCTEAGMFAIREGREYVTTKDFKEALLKVTGKKE 393          
BLAST of FC932022 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36
Identity = 87/196 (44.39%), Postives = 111/196 (56.63%), Query Frame = 2
Query:    2 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAVISSKEIDDSIDRIV 589
            KTL+AKAIA E    F  + GSE V  ++G GA  V +LF+ AKE AP I+F+DEIDA+             E  +TL QLL EMDGF+    + VIAATNR DILD ALLRPGRFDR + V +PD  GR EILKVH    K    V L +IA  T G SG               R  +  ++ ++   +ID+++
Sbjct:  184 KTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVL 378          
BLAST of FC932022 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.283e-35
Identity = 90/218 (41.28%), Postives = 119/218 (54.59%), Query Frame = 2
Query:    2 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAVISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEV 655
            KTL+AKA+A      F  + GSE V  F+G GA  V +LF+ AKE AP I+F+DEIDA+             E  +TL QLL EMDGF+    + VIAATNR DILD ALLRPGRFDR + V +PD +GR EILKVH + K     V L VIA  T G SG               R  +  ++  +   ++D+++        ++ +    +A HEV
Sbjct:  185 KTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVH-TRKMNLKGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVIG-------SEKRLAQQIAMHEV 394          
BLAST of FC932022 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.283e-35
Identity = 85/196 (43.37%), Postives = 110/196 (56.12%), Query Frame = 2
Query:    2 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAVISSKEIDDSIDRIV 589
            KTL+AKA+A E    F  + GSE V  ++G GA  V +LF+ AKE AP I+F+DEIDA+             E  +TL QLL EMDGF+    + VIAATNR DILD ALLRPGRFDR + V +PD  GR EILKVH    K    V L  IA  T G SG               R  +  ++ ++   ++D+++
Sbjct:  187 KTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKG-VDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVL 381          
The following BLAST results are available for this feature:
BLAST of FC932022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
PSMR_SULTO3.989e-3740.48Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
PSMR_SULIN3.989e-3742.05Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_METKA8.887e-3742.00Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PSMR_THEGJ1.516e-3641.28Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_METTH4.411e-3642.35Proteasome-activating nucleotidase OS=Methanobacte... [more]
PSMR_PYRAB5.760e-3643.88Proteasome-activating nucleotidase OS=Pyrococcus a... [more]
PSMR_METVS5.760e-3642.00Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_PYRFU7.523e-3644.39Proteasome-activating nucleotidase OS=Pyrococcus f... [more]
PSMR_PYRKO1.283e-3541.28Proteasome-activating nucleotidase OS=Pyrococcus k... [more]
PSMR_PYRHO1.283e-3543.37Proteasome-activating nucleotidase OS=Pyrococcus h... [more]

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Properties
Property NameValue
Genbank descriptionC34203G11EF PostHarveN Citrus clementina cDNA clone C34203G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932022 ID=FC932022; Name=FC932022; organism=Citrus clementina; type=EST; length=698bp
GAAGACTCTTCTTGCCAAGGCAATTGCTGGTGAAGCCGGTGTTCCATTTT
TCTCCATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTTGGTGCA
TCTAGAGTCCGAGATCTTTTCAAGAAGGCCAAAGAGAATGCTCCTTGCAT
TGTATTTGTGGATGAAATTGATGCCGTTGGAAGACAAAGAGGAACTGGAA
TTGGAGGAGGGAATGATGAAAGAGAGCAGACCCTTAACCAGCTTTTGACA
GAAATGGATGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCAAC
TAACAGGGCGGACATTCTTGATTCTGCCTTATTGAGGCCTGGACGTTTTG
ATAGACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAGAACAGAGATA
TTAAAGGTTCACGGTAGCAACAAGAAGTTTGATGCAGATGTGTCTCTTGA
TGTGATAGCCATGAGAACACCTGGGTTCAGTGGTGCTGACCTTGCAAACC
TCTTAAATGAGGCTGCTATATTGGCTGGACGACGTGGGAAAGCTGTTATT
TCATCTAAAGAGATTGATGATTCGATTGATAGGATTGTGGCTGGAATGGA
AGGAACTGTCATGACAGATGGGAAGAGTAAAAGTCTTGTTGCATACCATG
AAGTTGGCCACGCAATATGCGGAACTTTGACTCCAGGACACGATCCCG
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