FC932040

Overview
NameFC932040
Unique NameFC932040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_MACFA (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca fascicularis GN=PCMT1 PE=2 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 69/143 (48.25%), Postives = 92/143 (64.34%), Query Frame = 2
Query:  221 SGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 649
            SG   +  ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  SI N+ K     LL  G + + VGDGR
Sbjct:    5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAECN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPT-LLSSGRVQLVVGDGR 144          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_HUMAN (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo sapiens GN=PCMT1 PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 69/143 (48.25%), Postives = 92/143 (64.34%), Query Frame = 2
Query:  221 SGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 649
            SG   +  ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  SI N+ K     LL  G + + VGDGR
Sbjct:    5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPT-LLSSGRVQLVVGDGR 144          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_CAEEL (Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis elegans GN=pcm-1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.984e-29
Identity = 64/144 (44.44%), Postives = 94/144 (65.28%), Query Frame = 2
Query:  221 SGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 652
            S  + N  ++++L++  V  S++  + M+++DR  F P    PY D+P  IGYNAT+SAPHMHA  L  L+ +L  G  ALD+GSG+GYLT C A+MVG  G  VG+EH+P+LV  S +NI K  +   L+ G++ +  GDGR+
Sbjct:    5 SSGSTNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRA--PYEDAPQRIGYNATVSAPHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRKHHSEQ-LERGNVIIIEGDGRQ 145          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_DROME (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 9.935e-25
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 2
Query:  236 NKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQG-----RAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 652
            N+ ++  L+ +GVI S  V++ M+  DR  + P    PY+D+P  IG   TISAPHMHA  L+ L ++LKPG   LD+GSG+GYLTACF   +  +G     R VG+EH  ELV  S  N+     + +L  G L +  GDGRK
Sbjct:   10 NEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRN--PYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRS-MLDSGQLLIVEGDGRK 150          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_DICDI (Probable protein-L-isoaspartate O-methyltransferase OS=Dictyostelium discoideum GN=pcmA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 61/137 (44.53%), Postives = 84/137 (61.31%), Query Frame = 2
Query:  257 LQHYG--VITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMH-ALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 652
            L HY   ++ +K + E ++ +DR  F+ +     PY D P  IGYNATISAPHMHA  L LL + +      ALDIGSG+GY+TAC   ++G  GR +GVEHIPEL+  SI++I++  +  L     +   VGDG K
Sbjct:   57 LLHYQKRMVLNKTIVETLKFVDRKLFLENKNVENPYYDEPKPIGYNATISAPHMHALMLDLLADRIPMSNGVALDIGSGSGYVTACLGHLMGCTGRVIGVEHIPELIERSIESIKRLDSTLL---DRIQFLVGDGIK 190          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_FERNB (Protein-L-isoaspartate O-methyltransferase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pcm PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19
Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 2
Query:  245 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 652
            + EHLQ+YGV  S+K+ E M  +DR  FVP       Y+D P+ IGY  TISAPHM     + LE  LK G   L+IG+G+GY  A  +L+VG  G    +E IPELV  + + I       LL   ++++ VGDG++
Sbjct:    2 LFEHLQYYGV--SRKIIEAMNKVDRKLFVPSELQESAYLDIPLPIGYGQTISAPHMVGMMCEYLE--LKDGDRVLEIGTGSGYNAAVMSLLVGESGWIYTIERIPELVQEAQKRIN------LLGINNITIIVGDGKE 129          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_AERPE (Protein-L-isoaspartate O-methyltransferase OS=Aeropyrum pernix GN=pcm PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 2
Query:  245 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 652
            MVE L+  G++TS++V E M  + R  FVP       Y D P+ IG+  TISAP +    LQLL+   +PG   LD+G+G+GY +A  A +V P GR   VE IPEL   + +N+EK+        G + V VGDG K
Sbjct:   41 MVEQLRRSGLVTSRRVLEAMARVPRHLFVPPEYRGMAYEDRPLPIGHGQTISAPGVVGRMLQLLDP--QPGEKVLDVGAGSGYQSALLAELVTPGGRVYAVERIPELAEYARENLEKTG-----YRGVVEVVVGDGSK 171          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_METKA (Protein-L-isoaspartate O-methyltransferase OS=Methanopyrus kandleri GN=pcm PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18
Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 2
Query:  245 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 652
            +VE L+  G I S +V+E M  + R  FVP+      YVDSP+ IG   TISAPHM A   +LL+   +PG   L++G+G+GY  A  A +V P GR + VE IPEL   +  N++K+     +K     V VGDG K
Sbjct:   15 LVERLKSLGYIRSNRVAEAMLKVPRHEFVPEDLRDRAYVDSPLPIGRGQTISAPHMVAIMTELLDP--RPGHKVLEVGAGSGYHAAVVAELVKPDGRVITVERIPELADFARNNLKKTGYDRFVK-----VLVGDGTK 145          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_METTP (Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.280e-18
Identity = 54/140 (38.57%), Postives = 81/140 (57.86%), Query Frame = 2
Query:  233 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDG 646
            + + ++E L++Y    S++V E M  + R  FVP+   P  Y D P+ IG+  TISAPHM A    LL+  L+ GM  L++G G GY  A  A +VGP G    VE IPELV  + +N+E++      +  ++S+ +GDG
Sbjct:    2 RKERLIESLRNY---VSERVVEAMSRVPRELFVPEELRPMAYEDRPLPIGHGQTISAPHMVAMMCDLLD--LREGMKVLEVGGGCGYHAAVMAELVGPSGHVYSVERIPELVEMARRNLERA------RYRNVSMILGDG 130          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_METJA (Protein-L-isoaspartate O-methyltransferase OS=Methanocaldococcus jannaschii GN=pcm PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.422e-17
Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 2
Query:  233 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKVGQSLLP 673
            + KA++E L   G I SK+V + +  + R  F+P+    Y  VD+P+ IGY  TISA HM     +LL+  LKPGM  L+IG+G GY  A  A +VG  G  V +E IPEL   + + + K      L   ++ V VGDG    + L P
Sbjct:    6 QKKAVIEKLIREGYIKSKRVIDALLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK------LGYDNVIVIVGDGTLGYEPLAP 146          
The following BLAST results are available for this feature:
BLAST of FC932040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PIMT_MACFA2.285e-2948.25Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_HUMAN2.285e-2948.25Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_CAEEL2.984e-2944.44Protein-L-isoaspartate O-methyltransferase OS=Caen... [more]
PIMT_DROME9.935e-2543.75Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_DICDI2.705e-2244.53Probable protein-L-isoaspartate O-methyltransferas... [more]
PIMT_FERNB2.144e-1942.03Protein-L-isoaspartate O-methyltransferase OS=Ferv... [more]
PIMT_AERPE4.776e-1942.03Protein-L-isoaspartate O-methyltransferase OS=Aero... [more]
PIMT_METKA1.389e-1842.03Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_METTP5.280e-1838.57Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_METJA3.422e-1738.93Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]

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Properties
Property NameValue
Genbank descriptionC34204A05EF PostHarveN Citrus clementina cDNA clone C34204A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932040 ID=FC932040; Name=FC932040; organism=Citrus clementina; type=EST; length=690bp
GATAGCGTATGGTTTCCGCTATTATTATATGCCTGGTTTAAAGCACATAT
TATCAACCTTCACTCTTATCCCTCACCGTCATCGCTGTTCTTACTTACCA
TCACCGTCACCGTCACTTGTCTCTTTGTCTTCTTCTTTTCATCTTCCAAA
TCCAGATAACCTCAGTCGTTTCCTCACGGGTAACTGTCCCTTTTTCAAGA
TGGAGCGATACCGGAGTGGAAGTGGTGTCAACAAGAATAAAGCGATGGTG
GAGCATTTGCAGCATTATGGAGTGATTACATCAAAAAAGGTATCTGAAGT
AATGGAAACTATTGATCGGGCTTGCTTTGTGCCAGATGGTACTCCACCTT
ATGTTGACAGCCCAATGGCAATAGGTTACAATGCCACTATTTCAGCACCT
CATATGCATGCAACATGCCTTCAATTATTGGAGGAGAATCTGAAACCTGG
CATGCACGCTTTGGATATTGGTTCTGGAACTGGATATTTGACAGCATGCT
TTGCCTTGATGGTTGGACCACAAGGTCGTGCTGTGGGTGTCGAGCACATT
CCTGAGTTGGTGGCTTCATCAATCCAGAATATTGAAAAAAGTGCAGCGGC
TCCATTGCTGAAAGAAGGTTCTCTCTCAGTGCATGTTGGTGATGGAAGAA
AGGTTGGCCAGAGTTTGCTCCCTATGATGCATACATGTCG
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