FC932040

Overview
NameFC932040
Unique NameFC932040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_THEM4 (Protein-L-isoaspartate O-methyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=pcm PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 50/145 (34.48%), Postives = 75/145 (51.72%), Query Frame = 2
Query:  245 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRKVGQSLLP 673
            M EHL+ YGV  SK + E M  IDR  FVP+      Y D P+ IG+  TISAPHM    +   E +LK     L+IG+G+GY  A  +L+VG  G    +E I +L   + +  ++          +++  +GDG++  +   P
Sbjct:    1 MYEHLKRYGV--SKNIIEAMNKIDRKYFVPENVKDLAYDDIPLPIGFGQTISAPHMVG--IMCKELDLKEKDKVLEIGTGSGYNAAVMSLLVGKSGHIYTIERIKQLYKIATKRFKQFGLT------NITCILGDGKEGFEEYAP 135          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_THENV (Protein-L-isoaspartate O-methyltransferase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=pcm PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13
Identity = 55/137 (40.15%), Postives = 75/137 (54.74%), Query Frame = 2
Query:  245 MVEHLQHYGVITSKKVSEVMETIDRACFV-PD-GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 649
            +VE L   GVI S+ V   M  + R  FV P+     Y D P+ +  +ATISAPHM A   +L+E   KPGM  L++G+G+GY  A  A  +  +GR   VE + EL   + QNIE+     L   G + V+ GDGR
Sbjct:    5 LVEELVREGVIKSESVRRAMLAVPREEFVMPEYRMMAYEDRPLPLFADATISAPHMVAMMCELVEP--KPGMKILEVGAGSGYQAAVCAEAMERRGRVYTVEIVKELAIYAAQNIER-----LGYWGVVEVYHGDGR 134          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_META3 (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pcm PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13
Identity = 46/123 (37.40%), Postives = 71/123 (57.72%), Query Frame = 2
Query:  227 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEK 589
            + K +A+V+ L + G + +K VS+ + T+ R  F+P     Y  VD+P+ IG+  TISA HM A     L+  LK G   L+IG+G+GY  A  A +VG  G+ + +E IPEL   +   ++K
Sbjct:    3 IKKMEAIVKGLINAGYLKNKMVSKALLTVPRHEFIPAELHDYAYVDTPLNIGHGQTISAIHMVAIICDALD--LKEGDKVLEIGTGSGYHAAVVAEIVGKNGQVITIERIPELAEKAESTLKK 123          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_PYRCJ (Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=pcm PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13
Identity = 53/141 (37.59%), Postives = 75/141 (53.19%), Query Frame = 2
Query:  245 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY-----VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 652
            +V  L   GVI S++V   M  + R  FV   TP Y      D P+ +   ATISAPHM A   +L+E   +PGM  L++G+G+GY  A  A  +  QG+   VE + EL   + QN+E+     L   G + V+ GDGR+
Sbjct:    5 LVAELVKEGVIKSERVKNAMLKVPREEFV---TPEYRMMAYEDRPLPLFAGATISAPHMVAMMCELIEP--RPGMKILEVGTGSGYHAAVCAEAIERQGKVYTVEIVRELAIFAAQNLER-----LGYLGVVEVYRGDGRR 135          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT1_METAC (Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina acetivorans GN=pcm1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 46/119 (38.66%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  284 KKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSA---AAPLLKEGSL 625
            +KV + M  + R  FVP+      Y+D+P+ IG+  TISAPHM A    LLE  L  G+  L+IG+G+GY  A    +VG  G    VE I  LV  + +N++K+       LL +GS+
Sbjct:   60 EKVLKAMLRVPRHLFVPEYAKKGAYIDTPLEIGFGQTISAPHMVAIMCDLLE--LSEGLKVLEIGAGSGYNAAVMGELVGKSGHVYTVERIEPLVDFARENLKKAGYENVTVLLDDGSM 176          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_THEON (Protein-L-isoaspartate O-methyltransferase OS=Thermococcus onnurineus (strain NA1) GN=pcm PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 55/137 (40.15%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  248 VEHLQHYGVITSKKVSEVMETIDRACFV-PDGTP-PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 652
            VE L+  G+I S+KV +    + R  FV P+     +VD P+ I    TISAPHM A  L+L E  L+ GM+ LDIG+G+G+  A  A +V  +     VE IPELV  + +N+EK+  A       + V +GDG K
Sbjct:   14 VEKLKREGIIRSEKVRQAFLKVPRYLFVLPEHKKWAHVDEPLPIPGGQTISAPHMVAIMLELAE--LEEGMNVLDIGTGSGWNAALAAELV--KTDVYTVERIPELVEFARKNLEKAGYA-----DRVHVIIGDGTK 141          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_PYRFU (Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus furiosus GN=pcm PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 52/139 (37.41%), Postives = 76/139 (54.68%), Query Frame = 2
Query:  248 VEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHV--GDGRK 652
            VE L+  G+I SK+V        R  FV D    Y  +D P+ I    T+SAPHM A  L++   NLKPGM+ L++G+G+G+  A  + +V  +     +E IPELV  + +N+E++        G  +VHV  GDG K
Sbjct:   15 VEMLKAEGIIRSKEVERAFLKYPRYLFVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIA--NLKPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA--------GVKNVHVILGDGSK 141          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_PYRAB (Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus abyssi GN=pcm PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 51/142 (35.92%), Postives = 76/142 (53.52%), Query Frame = 2
Query:  239 KAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHV--GDGRK 652
            K  VE L+  G+I S +V E      R  FV D    Y  +D P+ I    T+SAPHM A  L++ +  LK GM+ L++G+G+G+  A  + +V  +     +E IPELV  + +N+E++        G  +VHV  GDG K
Sbjct:   11 KRTVEMLEREGIIRSLEVKEAFLKYPRYMFVEDRYKSYAHIDEPLPIPAGQTVSAPHMVAIMLEIAK--LKEGMNVLEVGTGSGWNAALISYIV--KTDVYSIERIPELVEFAKRNLERA--------GVKNVHVILGDGSK 140          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_METMA (Protein-L-isoaspartate O-methyltransferase OS=Methanosarcina mazei GN=pcm PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = 2
Query:  197 KMERYRSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPD--GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSA---AAPLLKEGSL 625
            K +R +        K +VE L+  G +  +KV + M  + R  FVP+      YVD P+ IG+  TISAPHM A   ++LE  L  G   L+IG+G+GY  A  + +VG  G    VE +  L   + +N++++       LL+ GS+
Sbjct:   22 KRKREKEKECEKLRKLLVEGLE--GFVIDEKVLQAMLRVPRHRFVPEYEQRAAYVDMPLEIGHGQTISAPHMVAMMCEILE--LAEGHKVLEIGAGSGYNAAVMSELVGKTGHIYTVERVEPLANFAKKNLKEAGYKNVTVLLENGSM 165          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT2_METAC (Protein-L-isoaspartate O-methyltransferase 2 OS=Methanosarcina acetivorans GN=pcm2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.858e-12
Identity = 49/134 (36.57%), Postives = 70/134 (52.24%), Query Frame = 2
Query:  239 KAMVEHLQHYGVITSKKVSEVMETIDRACFVPD--GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSA---AAPLLKEGSL 625
            K +VE L+   ++  KKV + M  + R  FVP+      Y D P+ IG+  TIS PH  A   ++LE  L  G   L+IG+G+GY  A  A +VG  G    VE I  LV  + +N+E+        LL+ GS+
Sbjct:   31 KLLVEGLED--IVRDKKVLKAMFRVPRHRFVPEYEQRAAYTDRPLEIGHGQTISTPHTVALMCEILE--LSEGHKVLEIGTGSGYNAAVMAELVGKTGHIYSVERIEPLVNFARKNLEQMGYDNVTVLLENGSM 160          

HSP 2 Score: 20.7866 bits (42), Expect = 3.858e-12
Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = 1
Query:  652 GWPEFAPYD 678
            G+P +APYD
Sbjct:  161 GYPRYAPYD 169          
The following BLAST results are available for this feature:
BLAST of FC932040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PIMT_THEM41.030e-1334.48Protein-L-isoaspartate O-methyltransferase OS=Ther... [more]
PIMT_THENV1.758e-1340.15Protein-L-isoaspartate O-methyltransferase OS=Ther... [more]
PIMT_META31.758e-1337.40Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_PYRCJ6.679e-1337.59Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT1_METAC8.723e-1338.66Protein-L-isoaspartate O-methyltransferase 1 OS=Me... [more]
PIMT_THEON1.139e-1240.15Protein-L-isoaspartate O-methyltransferase OS=Ther... [more]
PIMT_PYRFU1.139e-1237.41Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_PYRAB3.315e-1235.92Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_METMA3.315e-1233.78Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT2_METAC3.858e-1236.57Protein-L-isoaspartate O-methyltransferase 2 OS=Me... [more]

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Properties
Property NameValue
Genbank descriptionC34204A05EF PostHarveN Citrus clementina cDNA clone C34204A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932040 ID=FC932040; Name=FC932040; organism=Citrus clementina; type=EST; length=690bp
GATAGCGTATGGTTTCCGCTATTATTATATGCCTGGTTTAAAGCACATAT
TATCAACCTTCACTCTTATCCCTCACCGTCATCGCTGTTCTTACTTACCA
TCACCGTCACCGTCACTTGTCTCTTTGTCTTCTTCTTTTCATCTTCCAAA
TCCAGATAACCTCAGTCGTTTCCTCACGGGTAACTGTCCCTTTTTCAAGA
TGGAGCGATACCGGAGTGGAAGTGGTGTCAACAAGAATAAAGCGATGGTG
GAGCATTTGCAGCATTATGGAGTGATTACATCAAAAAAGGTATCTGAAGT
AATGGAAACTATTGATCGGGCTTGCTTTGTGCCAGATGGTACTCCACCTT
ATGTTGACAGCCCAATGGCAATAGGTTACAATGCCACTATTTCAGCACCT
CATATGCATGCAACATGCCTTCAATTATTGGAGGAGAATCTGAAACCTGG
CATGCACGCTTTGGATATTGGTTCTGGAACTGGATATTTGACAGCATGCT
TTGCCTTGATGGTTGGACCACAAGGTCGTGCTGTGGGTGTCGAGCACATT
CCTGAGTTGGTGGCTTCATCAATCCAGAATATTGAAAAAAGTGCAGCGGC
TCCATTGCTGAAAGAAGGTTCTCTCTCAGTGCATGTTGGTGATGGAAGAA
AGGTTGGCCAGAGTTTGCTCCCTATGATGCATACATGTCG
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