FC932042
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932042 vs. ExPASy Swiss-Prot
Match: VPS26_ARATH (Vacuolar protein sorting-associated protein 26 OS=Arabidopsis thaliana GN=At4g27690 PE=2 SV=2) HSP 1 Score: 276.944 bits (707), Expect = 7.164e-74 Identity = 133/217 (61.29%), Postives = 176/217 (81.11%), Query Frame = 2 Query: 35 DRGNHYEFLSLVQELAAPGELLHPQTFPFNFKSVEKQYESYNGINVKLRHFVRVTVSRRMADVIRE-KDLWVYSYRMPPENNSPIKMDVGIEDCLHIEFEYSKSKYHLKDVIVGRIYFLLVRLKIKHMELSIIRRETTGSPPNQYNESETLVRFEIMDGSPSRGETIPIRLFLGGFDLTPTFRDVNKKYSTRYYLSLVLIDEDARRYFKQSEIALYR 682 DRGN Y+F SLV+EL PGE+ +T+PF F +VE YE+YNG+NV+LR+ ++VTV+R A I E ++L V +Y P+ N+ IKM+VGIEDCLHIEFEY+KSKYHLKDVI+G+IYFLLVR+K+K+M+L I RRE+TG+ N + E+ETL +FE+MDG+P RGE+IP+RLFL +DLTPT R++N K+S +YYL+LVL+DE+ RRYFKQ EI LYR Sbjct: 80 DRGNFYDFTSLVRELDVPGEIYERKTYPFEFPTVEMPYETYNGVNVRLRYVLKVTVTRGYAGSILEYQELVVRNYAPLPDINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYFLLVRIKMKNMDLEIRRRESTGAGANTHVETETLAKFELMDGTPVRGESIPVRLFLAPYDLTPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITLYR 296
BLAST of FC932042 vs. ExPASy Swiss-Prot
Match: VPS26_PLAF7 (Vacuolar protein sorting-associated protein 26 OS=Plasmodium falciparum (isolate 3D7) GN=PFL2415w PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.495e-67 Identity = 118/219 (53.88%), Postives = 169/219 (77.17%), Query Frame = 2 Query: 32 SDRGNHYEFLSLVQELAAPGELLHPQTFPFNFKSVEKQYESYNGINVKLRHFVRVTVSRRMA-DVIREKDLWVYSYRMPPENNSPIKMDVGIEDCLHIEFEYSKSKYHLKDVIVGRIYFLLVRLKIKHMELSIIRRETTGSPPNQYNESETLVRFEIMDGSPSRGETIPIRLFLGGFDLTPTFRDVNKKYSTRYYLSLVLIDEDARRYFKQSEIALYRQ 685 +D+ N Y+F S+ ++L PG L+ + F + F +V+KQ+ESY G NV+LR+FVR+ + + + ++ +E D V + +PPE N+ IKM+VGIEDCLHIEFEY KSKYHLKDV+VG++YFLLVR+KIKHMEL II+ ET+G N E+ TL +FEIMDGSP + E IP+RL+L GFDLTPT++++ K+S +YY++L+++DE+ RRYFK+ EI L+R+ Sbjct: 76 NDKANSYDFFSISKDLEPPGFLVESKQFKWKFSAVDKQHESYFGTNVQLRYFVRLNIIKGYSGNIQKEIDFIVQNLCIPPEINNTIKMEVGIEDCLHIEFEYDKSKYHLKDVVVGKVYFLLVRIKIKHMELDIIKMETSGVGKNYTTETVTLSKFEIMDGSPIKSECIPVRLYLSGFDLTPTYKNIQNKFSVKYYINLIIVDEEERRYFKKQEIFLWRK 294
BLAST of FC932042 vs. ExPASy Swiss-Prot
Match: VPS26_YEAST (Vacuolar protein sorting-associated protein 26 OS=Saccharomyces cerevisiae GN=VPS26 PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 2.936e-43 Identity = 85/134 (63.43%), Postives = 106/134 (79.10%), Query Frame = 2 Query: 281 PIKMDVGIEDCLHIEFEYSKSKYHLKDVIVGRIYFLLVRLKIKHMELSIIRRETTGSPPNQYNESETLVRFEIMDGSPSRGETIPIRLFLGGFDLTPTFRDVNKKYSTRYYLSLVLIDEDARRYFKQSEIALYR 682 P+++D+GIE+CLHIEFEY+KS+Y LK+VIVGRIYFLL RL+IKHMELS+I RE++G + T +R+EIMDGS +GETIPIRLFL G+DLTP ++ + YLSLV+IDED RRYFKQSEI LYR Sbjct: 246 PVRLDIGIENCLHIEFEYAKSQYSLKEVIVGRIYFLLTRLRIKHMELSLITRESSGLQTSNVMTDSTAIRYEIMDGSSVKGETIPIRLFLSGYDLTPNMS--CNYFNVKNYLSLVIIDEDGRRYFKQSEITLYR 377 HSP 2 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 2 Query: 53 EFLSLVQELAAPGELLHPQTFPFNFKSVEKQYESYNGINVKLRHFVRVTVSRRMADVIREKDLWVYSY 256 +FL +L GEL H Q+FPF F+ + K+YESY G NV + ++V+VTV R+ D+ + K WVY Y Sbjct: 116 QFLCQSYDLCPAGELQHSQSFPFLFRDLSKRYESYKGKNVDVAYYVKVTVMRKSTDISKIKRFWVYLY 183 The following BLAST results are available for this feature:
BLAST of FC932042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932042 ID=FC932042; Name=FC932042; organism=Citrus clementina; type=EST; length=714bpback to top |