FC932050

Overview
NameFC932050
Unique NameFC932050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.012e-26
Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 1
Query:    4 DQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRP 504
            D    E K L + RH N++R L CC      +L+Y++MP+G+L   L   RGS L W               YLH    PPI HRDIK++NIL+  ++   +ADFGL++L    +    S    G+ GY+ P+Y     + +KSDVYS+GVV++E++T  + +D + P
Sbjct:  834 DSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVP 1001          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.012e-26
Identity = 68/166 (40.96%), Postives = 95/166 (57.23%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDF 495
            V++  NE  L+S  +H NL++LL C IE  E +LVYE++P+ +L Q L  E  S  L W               YLH      I HRDIK+SN+LLD     K+ADFGL+R    + +H+ST   GT GY+ P+Y     L +K+DVYSFGV+++EI    ++  F
Sbjct:  353 VEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRINAF 518          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.012e-26
Identity = 71/196 (36.22%), Postives = 108/196 (55.10%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTL--CQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP-QGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            + M E + +   +H NL+ LL  C    E +LVYEFM +G+L    H  ++ G  L W               +LH   +P I HRD+KSSN+LLD N  ++V+DFG++RL     +H+S +   GTPGY+ P+Y+Q F    K DVYS+GVVL+E++T  +  D S    + NL    + +  +  + ++ DP L
Sbjct:  923 EFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SPDFGDNNLVGW-VKQHAKLRISDVFDPEL 1116          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.322e-26
Identity = 71/196 (36.22%), Postives = 108/196 (55.10%), Query Frame = 1
Query:    4 DQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ-GTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            D+ MNE  L++  +H NL+++L CCIE  E +L+YE++ + +L  +L  + R S L W               YLH      I HRD+K SNILLD N   K++DFG++R+   + +  +T    GT GY+ P+Y  Y    +KSDV+SFGV+++EI++  K   F     E +L +    R   G   EI+DP +
Sbjct:  567 DEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDPVI 762          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.727e-26
Identity = 61/164 (37.20%), Postives = 94/164 (57.32%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGS--GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVD 492
            Q   E +++    H NLLRL   C+   E +LVY +MP+G++   L+   G    L W               YLH   NP I HRD+K++NILLD ++ + V DFGL++L     SH++TA +GT G++ P+Y       +K+DV+ FGV+++E+IT  K++D
Sbjct:  340 QFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMID 503          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.255e-26
Identity = 70/186 (37.63%), Postives = 100/186 (53.76%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 576
            E ++L S +H  L+ L   C      +L+Y+++P G+L + L + RG  L W               YLH   +P I HRDIKSSNILLD N  ++V+DFGL++L   E SHI+T   GT GYL P+Y Q     +K+DVYSFGV+++E+++     D S      N+       I      EI+D
Sbjct:  348 ELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHK-RGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVD 532          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.945e-26
Identity = 71/187 (37.97%), Postives = 100/187 (53.48%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE-SSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRP---HSEVNLAALAIDRIGRGCVDE 567
            E  LL    H NL  L+  C E    +L+YE+M +  L  +L  +R   L W               YLH+   PPI HRD+K +NILL+   ++K+ADFGLSR    E S  IST   G+ GYLDP+Y+    + +KSDVYS GVVL+E+IT    +  S+    H   ++ ++  +   RG VD+
Sbjct:  617 EVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSFILSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQPAIASSKTEKVHISDHVRSILANGDIRGIVDQ 803          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.945e-26
Identity = 69/192 (35.94%), Postives = 104/192 (54.17%), Query Frame = 1
Query:   16 NEGKLLSSGRHPNLLRLLRCCI-----EEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 576
            +E ++++S RH NLL L   C      E  + I+V + + +G+L  HL  +  + L W               YLH    P I HRDIK+SNILLD  + +KVADFGL++      +H+ST   GT GY+ P+Y  Y  L +KSDVYSFGVVL+E+++  K +        V++A  A   +  G   ++++
Sbjct:  326 HEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVE 517          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.945e-26
Identity = 70/192 (36.46%), Postives = 103/192 (53.65%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRE-RGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 579
            Q   E ++LSS +H NL+ L    +     +L Y+++ +G+L   L    +   L W               YLH   +P I HRD+KSSNILLD +  +++ DFG+++      SH ST   GT GY+DP+Y +   L +KSDVYS+G+VL+E++T  K VD      E NL  L + + G   V E+ DP
Sbjct:  688 QFETELEMLSSIKHRNLVSLQAYSLSHLGSLLFYDYLENGSLWDLLHGPTKKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVD-----DESNLHHLIMSKTGNNEVMEMADP 874          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.945e-26
Identity = 73/199 (36.68%), Postives = 110/199 (55.28%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG---LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP-QGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA--IDRIGRGCVDEIIDPYL 585
            + M E + +   +H NL+ LL  C    E +LVYE+M +G+L   L  +   G   L W               +LH +  P I HRD+KSSN+LLD ++ ++V+DFG++RL     +H+S +   GTPGY+ P+Y+Q F    K DVYS+GV+L+E+++  K +D      + NL   A  + R  RG   EI+DP L
Sbjct:  898 EFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAKQLYREKRGA--EILDPEL 1094          
The following BLAST results are available for this feature:
BLAST of FC932050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
RCH2_ARATH1.012e-2636.90Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
CRK42_ARATH1.012e-2640.96Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
BRI1_ARATH1.012e-2636.22Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
SRK6_BRAOE1.322e-2636.22Putative serine/threonine-protein kinase receptor ... [more]
Y5457_ARATH1.727e-2637.20Probable LRR receptor-like serine/threonine-protei... [more]
FEI2_ARATH2.255e-2637.63LRR receptor-like serine/threonine-protein kinase ... [more]
SIRK_ARATH2.945e-2637.97Senescence-induced receptor-like serine/threonine-... [more]
RKF3_ARATH2.945e-2635.94Probable LRR receptor-like serine/threonine-protei... [more]
ERECT_ARATH2.945e-2636.46LRR receptor-like serine/threonine-protein kinase ... [more]
BRL3_ARATH2.945e-2636.68Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC34204B03EF PostHarveN Citrus clementina cDNA clone C34204B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932050 ID=FC932050; Name=FC932050; organism=Citrus clementina; type=EST; length=587bp
GTTGACCAAGTTATGAATGAGGGGAAGCTTCTCTCCTCTGGGAGACACCC
AAATCTACTTCGACTCCTAAGGTGCTGCATCGAGGAAGGTGAGCCTATAC
TTGTTTATGAATTTATGCCCCATGGTACTCTGTGTCAGCATCTGCAAAGA
GAGAGAGGAAGTGGACTTCCTTGGACAATACGGATTACCATAGCCACTGA
GACTGCTCAAGCAATTGCCTATCTTCACTCAGCTATGAATCCACCAATTT
ACCACCGAGACATCAAATCCAGCAATATACTATTGGATTACAACTATAGG
TCAAAGGTAGCGGATTTTGGGCTTTCCAGACTTGGCATGACTGAGTCATC
TCACATCTCAACTGCTCCACAAGGAACTCCAGGCTACCTTGATCCTCAAT
ACCATCAGTATTTCCATCTTCCTGACAAAAGTGATGTTTACAGTTTTGGG
GTAGTTCTTATTGAGATCATAACTGCACTGAAAGTGGTTGATTTTTCTCG
CCCTCACAGTGAGGTGAATTTGGCTGCACTTGCTATTGATAGGATTGGAA
GAGGTTGTGTGGATGAGATAATAGATCCATACCTTGA
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