FC932050

Overview
NameFC932050
Unique NameFC932050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.994e-36
Identity = 86/191 (45.03%), Postives = 118/191 (61.78%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHL-QRERGSGLP--WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESS--HISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 576
            E ++LS  RH +L+ L+  C E+ E +LVYE+MPHGTL  HL +R++ S  P  W               YLH+     I HRDIK++NILLD N+ +KV+DFGLSR+G T +S  H+ST  +GT GYLDP+Y++   L +KSDVYSFGVVL+E++    +   S P  + +L         RG VD+IID
Sbjct:  563 ELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNYRRGTVDQIID 753          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.994e-36
Identity = 82/191 (42.93%), Postives = 117/191 (61.26%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E ++L+  RH +L+ L+  C E  E I+VYE+M  GTL  HL   +    L W               YLH+     I HRD+KS+NILLD N+ +KVADFGLS+ G   + +H+STA +G+ GYLDP+Y     L +KSDVYSFGVV++E++    V+D S P  +VNL   A+  + +G +++IIDP+L
Sbjct:  531 EVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPFL 721          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.193e-35
Identity = 87/191 (45.55%), Postives = 114/191 (59.69%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQ-RERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E  LL    H NL+ L+  C E     L+YEF+P G L QHL  +  GS + W               YLHS   PPI HRDIK++NILLD   ++K+ADFGLSR   +   +HIST   GTPGYLDP+Y+Q   L +KSDVYSFG+VL+EIIT   V+D SR  S+ +++      + RG + +I+DP L
Sbjct:  623 EVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSR--SKSHISQWVGFELTRGDITKIMDPNL 811          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.558e-35
Identity = 84/190 (44.21%), Postives = 114/190 (60.00%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG-MTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E ++LS  RH +L+ L+  C E  E ILVYE+M +GTL  HL       L W               YLH+    P+ HRD+KS+NILLD N  +KVADFGLS+ G   + +H+STA +G+ GYLDP+Y +   L +KSDVYSFGVV+ E++ A  V+D +     VNLA  A+    +G ++ IIDP L
Sbjct:  526 EIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKGQLEHIIDPSL 715          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.035e-35
Identity = 86/194 (44.33%), Postives = 115/194 (59.28%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNP-PIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            +   E ++LS  RH +L+ L   C E  E ILVYEFM  GTL +HL       L W               YLHS+ +   I HRD+KS+NILLD +  +KVADFGLS++   + S+IS   +GT GYLDP+Y Q   L +KSDVY+FGVVL+E++ A   +D   PH EVNL+   +    +G +DEI+DP L
Sbjct:  528 EFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTIDEILDPSL 721          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.035e-35
Identity = 80/174 (45.98%), Postives = 108/174 (62.07%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGL-PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVN 519
            V++ +NE  +L+   H N+++LL CC+E   P+LVYEF+P+G LC+ L+ E    +  W               YLHSA + PIYHRDIK++NILLD  Y+ KV+DFG SR    + +H++T   GT GY+DP+Y Q     DKSDVYSFGVVL+E+IT       SR  SE N
Sbjct:  462 VEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKN--PSSRVQSEEN 633          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.658e-35
Identity = 78/164 (47.56%), Postives = 102/164 (62.20%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLP-WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVV 489
            + + +NE  +LS   H ++++LL CC+E   PILVYEF+P+G L QHL  E       W               YLH+A   PIYHRDIKS+NILLD  YR+KV+DFG SR    + +H +T   GT GY+DP+Y+   H  +KSDVYSFGVVL+E+IT  K V
Sbjct:  492 LQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPV 655          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.658e-35
Identity = 77/164 (46.95%), Postives = 102/164 (62.20%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLP-WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVV 489
            +++ +NE  +LS   H ++++LL CC+E   P LVYEF+P+G L QH+  E       W               YLHSA + PIYHRDIKS+NILLD  YR+KV+DFG SR    + +H +T   GT GY+DP+Y+      DKSDVYSFGVVL+E+IT  K V
Sbjct:  489 LEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPV 652          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.658e-35
Identity = 87/194 (44.85%), Postives = 114/194 (58.76%), Query Frame = 1
Query:   16 NEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGS---GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            NE  LLS   H +LL LL  C +  E +LVYEFM HG+L QHL  +  +    L W               YLH    PP+ HRDIKSSNIL+D ++ ++VADFGLS LG  +S + +S  P GT GYLDP+Y++  +L  KSDVYSFGVVL+EI++  K +D      E N+   A+  I  G +  I+DP L
Sbjct:  550 NELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQ--FEEGNIVEWAVPLIKAGDIFAILDPVL 741          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.471e-35
Identity = 79/193 (40.93%), Postives = 114/193 (59.07%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGL-PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 576
            +++ +NE  LLS   H N+++LL CC+E   PILVYE++P+G L + L  E    +  W               Y+HSA + PI+HRDIK++NILLD  YR+K++DFG SR   T+ +H++T   GT GY+DP+Y        KSDVYSFGVVL+E+IT  K +   R    + LA   ++ +      +IID
Sbjct:  466 MEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIID 658          
The following BLAST results are available for this feature:
BLAST of FC932050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
Y5900_ARATH6.994e-3645.03Putative receptor-like protein kinase At5g39000 OS... [more]
Y2393_ARATH6.994e-3642.93Probable receptor-like protein kinase At2g39360 OS... [more]
PAM74_ARATH1.193e-3545.55Probable LRR receptor-like serine/threonine-protei... [more]
Y5597_ARATH1.558e-3544.21Probable receptor-like protein kinase At5g59700 OS... [more]
Y2232_ARATH2.035e-3544.33Probable receptor-like protein kinase At2g23200 OS... [more]
WAKLD_ARATH2.035e-3545.98Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLL_ARATH2.658e-3547.56Putative wall-associated receptor kinase-like 13 O... [more]
WAKLK_ARATH2.658e-3546.95Putative wall-associated receptor kinase-like 11 O... [more]
CRI4_MAIZE2.658e-3544.85Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
WAKLC_ARATH3.471e-3540.93Wall-associated receptor kinase-like 3 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC34204B03EF PostHarveN Citrus clementina cDNA clone C34204B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932050 ID=FC932050; Name=FC932050; organism=Citrus clementina; type=EST; length=587bp
GTTGACCAAGTTATGAATGAGGGGAAGCTTCTCTCCTCTGGGAGACACCC
AAATCTACTTCGACTCCTAAGGTGCTGCATCGAGGAAGGTGAGCCTATAC
TTGTTTATGAATTTATGCCCCATGGTACTCTGTGTCAGCATCTGCAAAGA
GAGAGAGGAAGTGGACTTCCTTGGACAATACGGATTACCATAGCCACTGA
GACTGCTCAAGCAATTGCCTATCTTCACTCAGCTATGAATCCACCAATTT
ACCACCGAGACATCAAATCCAGCAATATACTATTGGATTACAACTATAGG
TCAAAGGTAGCGGATTTTGGGCTTTCCAGACTTGGCATGACTGAGTCATC
TCACATCTCAACTGCTCCACAAGGAACTCCAGGCTACCTTGATCCTCAAT
ACCATCAGTATTTCCATCTTCCTGACAAAAGTGATGTTTACAGTTTTGGG
GTAGTTCTTATTGAGATCATAACTGCACTGAAAGTGGTTGATTTTTCTCG
CCCTCACAGTGAGGTGAATTTGGCTGCACTTGCTATTGATAGGATTGGAA
GAGGTTGTGTGGATGAGATAATAGATCCATACCTTGA
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