FC932050

Overview
NameFC932050
Unique NameFC932050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.235e-32
Identity = 76/181 (41.99%), Postives = 106/181 (58.56%), Query Frame = 1
Query:   13 MNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES---SHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI 546
            +NE + +S   H NL+RLL    +  E ILVYE+M +G+L  HL   +   L W               YLH  + PP+ HRDIKSSNILLD  + +KV+DFGLS++G TE    SH+S    GT GY+DP+Y+++  L  KSDVYSFGVVL+E+++  K +  +   +  NL    +  I
Sbjct:  497 VNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHLHNPQFDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHKAIHNNEDENPRNLVEYVVPYI 677          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.612e-32
Identity = 81/193 (41.97%), Postives = 111/193 (57.51%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERG-SGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 579
            Q   E  LL    H NL+ L+  C E    +L+YE+M +G L QHL  E   S L W               YLH    PP+ HRDIKS NILLD N+++K+ DFGLSR   +   +H+ST   G+PGYLDP+Y++   L +KSDV+SFGVVL+EIIT+  V+D +R  S  ++      ++  G +  I+DP
Sbjct:  631 QFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKS--HIGEWVGFKLTNGDIKNIVDP 821          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.106e-32
Identity = 75/168 (44.64%), Postives = 101/168 (60.12%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLP-WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEV 516
            E  LL    H NL+ L+  C E     L+YEF+P+G L QHL  + G  +  W               YLH    PP+ HRD+K++NILLD +Y++K+ADFGLSR   +   SH+ST   GTPGYLDP+Y+    L +KSDVYSFG+VL+E+IT   V+D +R  S +
Sbjct:  624 EVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGKPIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVIDRNRRKSHI 791          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.106e-32
Identity = 82/197 (41.62%), Postives = 107/197 (54.31%), Query Frame = 1
Query:    4 DQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQ--RERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            D  +NE  LLS  RH NL+     C E    ILVYE++  G+L  HL   R +   L W               YLH+   P I HRD+KSSNILLD +  +KV+DFGLS+     ++SHI+T  +GT GYLDP+Y+    L +KSDVYSFGVVL+E+I   + +  S      NL   A   +  G   EI+D  L
Sbjct:  645 DSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQAGAF-EIVDDIL 840          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.106e-32
Identity = 72/190 (37.89%), Postives = 107/190 (56.32%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E +LL +  H NL   +  C +     L+YE+M +G L  +L  E    L W               YLH    PPI HRD+K++NILL+ N  +K+ADFGLS++   +  SH+ TA  GTPGY+DP+Y+  F L +KSDVYSFG+VL+E+IT  + +  +    ++N+       +  G +D ++DP L
Sbjct:  624 EAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLSSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRL 813          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.106e-32
Identity = 78/187 (41.71%), Postives = 112/187 (59.89%), Query Frame = 1
Query:   28 LLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            +LS  RH +L+ L+  C E  E ILVYE+M +GTL  HL       L W               YLH+     I HRD+K++NILLD N+ +K++DFGLS+ G + + +H+STA +G+ GYLDP+Y +   L +KSDVYSFGVVL E + A  V++ + P  ++NLA  A+    +  ++ IID  L
Sbjct:  567 MLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRNLESIIDSNL 753          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.106e-32
Identity = 80/192 (41.67%), Postives = 112/192 (58.33%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQ-RERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT--ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E +LL    H NL+ L+  C E+    L+YE+M +G L QHL  +  GS L W               YLH+   P + HRD+KS+NILLD  +++K+ADFGLSR      + S +ST   GT GYLDP+Y+    L +KSDVYSFG++L+EIIT  +V+D +R +   N+A      I +G   +I+DP L
Sbjct:  610 EVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENP--NIAEWVTFVIKKGDTSQIVDPKL 799          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.127e-32
Identity = 80/197 (40.61%), Postives = 114/197 (57.87%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSR--PHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            Q   E +LL    H NL+ L+  C E     L+YE+M +G L +H+   R    L W               YLH+   PP+ HRD+K++NILL+ ++ +K+ADFGLSR  + E  +H+ST   GTPGYLDP+YH+   L +KSDVYSFG++L+EIIT   V+D SR  PH    +  +    + +G +  I+DP L
Sbjct:  618 QFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSREKPHIGEWVGVM----LTKGDIQSIMDPSL 810          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.127e-32
Identity = 81/191 (42.41%), Postives = 110/191 (57.59%), Query Frame = 1
Query:   16 NEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG--LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 579
            NE  LLS+ +H NL+ LL  C E  + ILVY FM +G+L   L  E      L W               YLH+     + HRD+KSSNILLD++  +KVADFG S+    E  S++S   +GT GYLDP+Y++   L +KSDV+SFGVVL+EI++  + ++  RP  E +L   A   I    VDEI+DP
Sbjct:  638 NELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDP 828          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.002e-32
Identity = 77/191 (40.31%), Postives = 111/191 (58.12%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E +LL    H NL+ L+  C +     L+YE+M +G L +++  +RG   L W               YLH+   PP+ HRD+K++NILL+  Y +K+ADFGLSR   +   SH+ST   GTPGYLDP+Y++   L +KSDVYSFGVVL+EI+T   V D +R  + +N        + +G +  I+DP L
Sbjct:  609 EVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRERTHIN--EWVGSMLTKGDIKSILDPKL 797          
The following BLAST results are available for this feature:
BLAST of FC932050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
ACCR4_ARATH1.235e-3241.99Serine/threonine-protein kinase-like protein CCR4 ... [more]
Y4245_ARATH1.612e-3241.97Probable LRR receptor-like serine/threonine-protei... [more]
Y5596_ARATH2.106e-3244.64Probable LRR receptor-like serine/threonine-protei... [more]
Y5487_ARATH2.106e-3241.62Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH2.106e-3237.89Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH2.106e-3241.71Probable receptor-like protein kinase At1g30570 OS... [more]
MEE39_ARATH2.106e-3241.67Probable LRR receptor-like serine/threonine-protei... [more]
Y5182_ARATH6.127e-3240.61Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA6.127e-3242.41Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5188_ARATH8.002e-3240.31Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC34204B03EF PostHarveN Citrus clementina cDNA clone C34204B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932050 ID=FC932050; Name=FC932050; organism=Citrus clementina; type=EST; length=587bp
GTTGACCAAGTTATGAATGAGGGGAAGCTTCTCTCCTCTGGGAGACACCC
AAATCTACTTCGACTCCTAAGGTGCTGCATCGAGGAAGGTGAGCCTATAC
TTGTTTATGAATTTATGCCCCATGGTACTCTGTGTCAGCATCTGCAAAGA
GAGAGAGGAAGTGGACTTCCTTGGACAATACGGATTACCATAGCCACTGA
GACTGCTCAAGCAATTGCCTATCTTCACTCAGCTATGAATCCACCAATTT
ACCACCGAGACATCAAATCCAGCAATATACTATTGGATTACAACTATAGG
TCAAAGGTAGCGGATTTTGGGCTTTCCAGACTTGGCATGACTGAGTCATC
TCACATCTCAACTGCTCCACAAGGAACTCCAGGCTACCTTGATCCTCAAT
ACCATCAGTATTTCCATCTTCCTGACAAAAGTGATGTTTACAGTTTTGGG
GTAGTTCTTATTGAGATCATAACTGCACTGAAAGTGGTTGATTTTTCTCG
CCCTCACAGTGAGGTGAATTTGGCTGCACTTGCTATTGATAGGATTGGAA
GAGGTTGTGTGGATGAGATAATAGATCCATACCTTGA
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