FC932050

Overview
NameFC932050
Unique NameFC932050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 128.642 bits (322), Expect = 2.179e-29
Identity = 75/192 (39.06%), Postives = 103/192 (53.65%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG---LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E + LS  +HPNL+ L   C  + + +L+Y +M +G+L   L  ER  G   L W               YLH   +P I HRDIKSSNILLD N+ S +ADFGL+RL     +H+ST   GT GY+ P+Y Q      K DVYSFGVVL+E++T  + VD  +P    +L +  +         E+ DP +
Sbjct:  778 EVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLH-ERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFDPLI 968          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.179e-29
Identity = 76/170 (44.71%), Postives = 99/170 (58.24%), Query Frame = 1
Query:   16 NEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNL 522
            +E   L    H NL++LL  C E+ E +LVYEFMP G+L  HL R R    PW               +LHS     IY RD K+SNILLD NY +K++DFGL++LG   E SH++T   GT GY  P+Y    HL  KSDV++FGVVL+EI+T L   +  RP  + +L
Sbjct:  139 SEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFR-RNDPFPWDLRIKIVIGAARGLAFLHSLQREVIY-RDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESL 306          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.179e-29
Identity = 77/174 (44.25%), Postives = 105/174 (60.34%), Query Frame = 1
Query:   13 MNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGS---GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG-MTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNL 522
            + E   L    HPNL++L+  C+E+   +LVYEFM  G+L  HL R RG+    LPW               +LHS     IY RDIK+SNILLD +Y +K++DFGL+R G M + S++ST   GT GY  P+Y    HL  +SDVYSFGV+L+EI++  + +D +RP  E NL
Sbjct:  119 LTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFR-RGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIY-RDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENL 290          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.717e-29
Identity = 81/192 (42.19%), Postives = 108/192 (56.25%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSR--PHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E +LL    H NL+ L+  C E+    L+Y++M +G L +H      S + W               YLH    P I HRD+KSSNILLD   ++K+ADFGLSR   + + SH+ST   GT GYLD +Y+Q   L +KSDVYSFGVVL+EIIT   V+D +R  PH    +A      + RG +  I+DP L
Sbjct:  614 EVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKKHFSGS--SIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNRDMPH----IAEWVKLMLTRGDISNIMDPKL 799          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.717e-29
Identity = 73/180 (40.56%), Postives = 101/180 (56.11%), Query Frame = 1
Query:   13 MNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG 549
            + E   L    HPNL++L+  C+E    +LVYEFMP G+L  HL R     L W               +LH A +  IY RD K++NILLD  + SK++DFGL++ G T + +H+ST   GT GY  P+Y     L  KSDVYSFGVVL+E+++  + VD S+   E +L   A   +G
Sbjct:  135 LTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIY-RDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLG 313          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.855e-29
Identity = 76/190 (40.00%), Postives = 102/190 (53.68%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERG-SGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E +LL    H  L+ L+  C ++    L+YE M  G L +HL  + G S L W               YLH+   P I HRD+KS+NILL   + +K+ADFGLSR  +  +    T   GT GYLDP+YH+   L  KSDVYSFGVVL+EII+   V+D SR     N+       +  G ++ I+DP L
Sbjct:  603 EVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSR--ENCNIVEWTSFILENGDIESIVDPNL 790          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 4.855e-29
Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHL--QRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEII 471
            + +NE  ++S+  HPNL++L  CC+E G+ +LVYEF+ + +L + L   +E    L W               YLH      I HRDIK++N+LLD     K++DFGL++L   +S+HIST   GT GY+ P+Y    HL DK+DVYSFG+V +EI+
Sbjct:  664 EFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIV 820          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.340e-29
Identity = 71/195 (36.41%), Postives = 111/195 (56.92%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHL--QRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            + + E  ++S+ +HPNL++L  CCIE  E +LVYE++ + +L + L    ++   L W               YLH      I HRDIK++N+LLD +  +K++DFGL++L   E++HIST   GT GY+ P+Y    +L DK+DVYSFGVV +EI++     ++      V L   A     +G + E++DP L
Sbjct:  709 EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDL 903          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 8.281e-29
Identity = 70/195 (35.90%), Postives = 111/195 (56.92%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHL--QRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            + + E  ++S+ +HPNL++L  CCIE  E +LVYE++ + +L + L    ++   L W               YLH      I HRDIK++N+LLD +  +K++DFGL++L   E++HIST   GT GY+ P+Y    +L DK+DVYSFGVV +EI++     ++      + L   A     +G + E++DP L
Sbjct:  707 EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDL 901          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.082e-28
Identity = 76/195 (38.97%), Postives = 112/195 (57.44%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            Q   E +LL    H NL+ L+  C E  +  L+YE+M +G L +H+  +RG   L W               YLH+   P + HRD+K++NILL+ ++ +K+ADFGLSR    E  +H+ST   GT GYLDP+Y++   L +KSDVYSFGVVL+ +IT   V+D +R   + ++A      + +G +  I DP L
Sbjct:  617 QFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNR--EKRHIAEWVGGMLTKGDIKSITDPNL 809          
The following BLAST results are available for this feature:
BLAST of FC932050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
PSKR1_ARATH2.179e-2939.06Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
CX32_ARATH2.179e-2944.71Probable serine/threonine-protein kinase Cx32, chl... [more]
BIK1_ARATH2.179e-2944.25Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y1756_ARATH3.717e-2942.19Probable LRR receptor-like serine/threonine-protei... [more]
APK2B_ARATH3.717e-2940.56Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y1755_ARATH4.855e-2940.00Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH4.855e-2941.40Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH6.340e-2936.41Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH8.281e-2935.90Probable LRR receptor-like serine/threonine-protei... [more]
Y5181_ARATH1.082e-2838.97Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC34204B03EF PostHarveN Citrus clementina cDNA clone C34204B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932050 ID=FC932050; Name=FC932050; organism=Citrus clementina; type=EST; length=587bp
GTTGACCAAGTTATGAATGAGGGGAAGCTTCTCTCCTCTGGGAGACACCC
AAATCTACTTCGACTCCTAAGGTGCTGCATCGAGGAAGGTGAGCCTATAC
TTGTTTATGAATTTATGCCCCATGGTACTCTGTGTCAGCATCTGCAAAGA
GAGAGAGGAAGTGGACTTCCTTGGACAATACGGATTACCATAGCCACTGA
GACTGCTCAAGCAATTGCCTATCTTCACTCAGCTATGAATCCACCAATTT
ACCACCGAGACATCAAATCCAGCAATATACTATTGGATTACAACTATAGG
TCAAAGGTAGCGGATTTTGGGCTTTCCAGACTTGGCATGACTGAGTCATC
TCACATCTCAACTGCTCCACAAGGAACTCCAGGCTACCTTGATCCTCAAT
ACCATCAGTATTTCCATCTTCCTGACAAAAGTGATGTTTACAGTTTTGGG
GTAGTTCTTATTGAGATCATAACTGCACTGAAAGTGGTTGATTTTTCTCG
CCCTCACAGTGAGGTGAATTTGGCTGCACTTGCTATTGATAGGATTGGAA
GAGGTTGTGTGGATGAGATAATAGATCCATACCTTGA
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