FC932050

Overview
NameFC932050
Unique NameFC932050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.082e-28
Identity = 72/196 (36.73%), Postives = 110/196 (56.12%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG---LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            + +NE  ++S+ +HPNL++L  CC+E  + ILVYE++ +  L + L  +  S    L W               +LH      I HRDIK+SN+LLD +  +K++DFGL++L    ++HIST   GT GY+ P+Y    +L +K+DVYSFGVV +EI++     +F      V L   A     RG + E++DP L
Sbjct:  718 EFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTL 913          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.082e-28
Identity = 76/176 (43.18%), Postives = 102/176 (57.95%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERG---SGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG-MTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 534
            E   L    H +L++L+  C+E+   +LVYEFMP G+L  HL R RG     L W               +LHS+    IY RD K+SNILLD  Y +K++DFGL++ G + + SH+ST   GT GY  P+Y    HL  KSDVYSFGVVL+E+++  + VD +RP  E NL   A
Sbjct:  122 EVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFR-RGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIY-RDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWA 295          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.409e-28
Identity = 72/191 (37.70%), Postives = 103/191 (53.93%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQ--HLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E ++LS  +H NL+ L   C+ +   IL+Y FM +G+L    H   E  + L W               Y+H    P I HRDIKSSNILLD N+++ VADFGLSRL +   +H++T   GT GY+ P+Y Q +    + DVYSFGVV++E++T  + ++  RP     L A        G  +E+ D  L
Sbjct:  847 EVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFRPKMSRELVAWVHTMKRDGKPEEVFDTLL 1037          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.147e-28
Identity = 70/172 (40.70%), Postives = 99/172 (57.56%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNL 522
            Q + E   +S+ +H NL++L  CC E    +LVYE++P+G+L Q L  E+   L W               YLH      I HRD+K+SNILLD     KV+DFGL++L   + +HIST   GT GYL P+Y    HL +K+DVY+FGVV +E+++        RP+S+ NL
Sbjct:  733 QFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVS-------GRPNSDENL 897          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.147e-28
Identity = 72/163 (44.17%), Postives = 94/163 (57.67%), Query Frame = 1
Query:   16 NEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSR 501
            +E ++L    H NL  L+    E  +  L+YEFM +G +  HL  +    L W               YLH    PPI HRD+K+SNILL+   R+K+ADFGLSR   TES SH+ST   GTPGYLDP   +   L +KSD+YSFGVVL+E+IT   V+  S+
Sbjct:  612 SEVEVLVRVHHVNLTALIGYFHEGDQMGLIYEFMANGNMADHLAGKYQHTLSWRQRLQIALDAAQGLEYLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGKTVIKESQ 774          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.147e-28
Identity = 70/168 (41.67%), Postives = 98/168 (58.33%), Query Frame = 1
Query:   16 NEGKLLSSGRHPNLLRLLRCCI----EEGEPILVYEFMPHGTLCQHL-QRERGSGLP--WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFS 498
            NE +++S+ +H NL+ L  C +     E +  LVY++M +G L  HL  R   + +P  W               YLH  + P IYHRDIK +NILLD + R++VADFGL++      SH++T   GT GYL P+Y  Y  L +KSDVYSFGVV++EI+   K +D S
Sbjct:  338 NEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 505          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.147e-28
Identity = 76/196 (38.78%), Postives = 109/196 (55.61%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            VD   NE  L+S   H NL++LL C I   E +LVYE++ + +L  +L  R+    L W               YLH   N  I HRDIK SNILL+ ++  ++ADFGL+RL   + +HISTA  GT GY+ P+Y     L +K+DVYSFGV++IE+IT  +   F +    +  +  ++ R     V+E +DP L
Sbjct:  361 VDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWSLYRTSN--VEEAVDPIL 554          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28
Identity = 73/195 (37.44%), Postives = 107/195 (54.87%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG--LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQ---GTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEV-NLAALAIDRIGRGCVDEIIDPYL 585
            E + L + RH +++RL  CC      +LVYE+MP+G+L   L  +R  G  L W               YLH    PPI HRD+KSSNILLD +Y +KVADFG++++G    S    A     G+ GY+ P+Y     + +KSD+YSFGVVL+E++T  +  D      ++      A+D+ G   ++ +IDP L
Sbjct:  737 EVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDKDMAKWVCTALDKCG---LEPVIDPKL 928          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.155e-28
Identity = 72/180 (40.00%), Postives = 101/180 (56.11%), Query Frame = 1
Query:   13 MNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG 549
            + E   L    HPNL+ L+  C E    +LVYEFMP G+L  HL R     L W               +LH A +  IY RD K++NILLD ++ +K++DFGL++ G T +++H+ST   GT GY  P+Y     L  KSDVYSFGVVL+E+I+  + +D S   +E +L   A   +G
Sbjct:  138 LTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIY-RDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLG 316          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.196e-27
Identity = 71/174 (40.80%), Postives = 95/174 (54.60%), Query Frame = 1
Query:   16 NEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLP---WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAA 528
            +E  +L+  RH +L+ LL  C++  E +LVYE+MP GTL +HL      GL    W               YLH   +    HRD+K SNILL  + R+KVADFGL RL       I T   GT GYL P+Y     +  K DVYSFGV+L+E+IT  K +D S+P   ++L +
Sbjct:  633 SEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVS 806          
The following BLAST results are available for this feature:
BLAST of FC932050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
Y1765_ARATH1.082e-2836.73Probable LRR receptor-like serine/threonine-protei... [more]
APK1A_ARATH1.082e-2843.18Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
PSYR1_ARATH2.409e-2837.70Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y5614_ARATH3.147e-2840.70Probable LRR receptor-like serine/threonine-protei... [more]
Y1570_ARATH3.147e-2844.17Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH3.147e-2841.67Probable receptor-like protein kinase At1g11050 OS... [more]
CRK3_ARATH3.147e-2838.78Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
RLK5_ARATH7.010e-2837.44Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
APK2A_ARATH9.155e-2840.00Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
TMK1_ARATH1.196e-2740.80Probable receptor protein kinase TMK1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionC34204B03EF PostHarveN Citrus clementina cDNA clone C34204B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932050 ID=FC932050; Name=FC932050; organism=Citrus clementina; type=EST; length=587bp
GTTGACCAAGTTATGAATGAGGGGAAGCTTCTCTCCTCTGGGAGACACCC
AAATCTACTTCGACTCCTAAGGTGCTGCATCGAGGAAGGTGAGCCTATAC
TTGTTTATGAATTTATGCCCCATGGTACTCTGTGTCAGCATCTGCAAAGA
GAGAGAGGAAGTGGACTTCCTTGGACAATACGGATTACCATAGCCACTGA
GACTGCTCAAGCAATTGCCTATCTTCACTCAGCTATGAATCCACCAATTT
ACCACCGAGACATCAAATCCAGCAATATACTATTGGATTACAACTATAGG
TCAAAGGTAGCGGATTTTGGGCTTTCCAGACTTGGCATGACTGAGTCATC
TCACATCTCAACTGCTCCACAAGGAACTCCAGGCTACCTTGATCCTCAAT
ACCATCAGTATTTCCATCTTCCTGACAAAAGTGATGTTTACAGTTTTGGG
GTAGTTCTTATTGAGATCATAACTGCACTGAAAGTGGTTGATTTTTCTCG
CCCTCACAGTGAGGTGAATTTGGCTGCACTTGCTATTGATAGGATTGGAA
GAGGTTGTGTGGATGAGATAATAGATCCATACCTTGA
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