FC932050

Overview
NameFC932050
Unique NameFC932050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.196e-27
Identity = 71/192 (36.98%), Postives = 104/192 (54.17%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLP---WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E + LS  +HPNL+ LL  C  + + +L+Y +M +G+L   L  E+  G P   W               YLH +  P I HRDIKSSNILL   + + +ADFGL+RL +   +H++T   GT GY+ P+Y Q      K DVYSFGVVL+E++T  + +D  +P    +L +  +         EI DP++
Sbjct:  787 EVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLH-EKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFI 977          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.562e-27
Identity = 71/191 (37.17%), Postives = 107/191 (56.02%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E +LL    H +L+ L+  C +     L+YE+M  G L +++  +     L W               YLH+   PP+ HRD+K +NILL+   ++K+ADFGLSR   +   SH+ T   GTPGYLDP+Y++   L +KSDVYSFGVVL+EI+T   V++ +R    +N   + +  +  G +  I+DP L
Sbjct:  613 EVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRERPHINEWVMFM--LTNGDIKSIVDPKL 801          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.562e-27
Identity = 68/172 (39.53%), Postives = 99/172 (57.56%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNL 522
            Q + E   +SS  H NL++L  CC E    +LVYE++P+G+L Q L  ++   L W               YLH   +  I HRD+K+SNILLD     +++DFGL++L   + +HIST   GT GYL P+Y    HL +K+DVY+FGVV +E+++        RP+S+ NL
Sbjct:  734 QFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVS-------GRPNSDENL 898          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.562e-27
Identity = 72/191 (37.70%), Postives = 103/191 (53.93%), Query Frame = 1
Query:   16 NEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            NE  ++S+  H NL+RLL C     E +LVYE++ + +L + +    RG  L W               YLH   +  I HRDIK+SNILLD   ++K+ADFGL+R    + SHISTA  GT GY+ P+Y  +  L +  DVYSFGV+++EI+T  +           +L   A      G +++I DP L
Sbjct:  368 NEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNL 558          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.040e-27
Identity = 73/174 (41.95%), Postives = 100/174 (57.47%), Query Frame = 1
Query:   13 MNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG---LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG-MTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNL 522
            + E   L    HPNL++L+  C+E+ + +LVYEFM  G+L  HL          L W               +LHS     IY RDIK+SNILLD ++ +K++DFGL+R G M E S++ST   GT GY  P+Y    HL  +SDVYSFGVVL+E++   + +D +RP  E NL
Sbjct:  113 LTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIY-RDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNL 285          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.664e-27
Identity = 72/177 (40.68%), Postives = 102/177 (57.63%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEP----ILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNL 522
            Q + E + L    HPN+++L+  C E+GE     +LVYE+M + +L  HL   R   LPW               YLH      + +RD KSSN+LLD  +  K++DFGL+R G   +++H++TA  GT GY  P+Y Q  HL  KSDVYSFGVVL EIIT  + ++ ++P +E  L
Sbjct:  133 QWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHTLPWKKRLEIMLGAAEGLTYLHDLK---VIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRL 306          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.479e-27
Identity = 71/187 (37.97%), Postives = 103/187 (55.08%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 579
            E ++L S +H  L+ L   C      +L+Y+++P G+L + L  ERG  L W               YLH   +P I HRDIKSSNILLD N  ++V+DFGL++L   E SHI+T   GT GYL P+Y Q     +K+DVYSFGV+++E+++  +  D S     +N+       I      +I+DP
Sbjct:  350 ELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALH-ERGEQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDP 535          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.934e-27
Identity = 63/178 (35.39%), Postives = 98/178 (55.06%), Query Frame = 1
Query:   43 RHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVD--FSRPHSEVNLAALAIDRIGRGCVDEI 570
            RHPNL+ L+     E E  L+Y ++  G L   ++    + + W               YLH   +P + HRDIK SNILLD NY + ++DFGLS+L  T  SH++T   GT GY+ P+Y     + +K+DVYS+G+VL+E+I+  + +D  FS   +  N+ + A   + +G   E+
Sbjct:  313 RHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFIKERSKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEV 490          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 7.751e-27
Identity = 77/195 (39.49%), Postives = 104/195 (53.33%), Query Frame = 1
Query:    4 DQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHL-QRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            DQ  NE  L+S  +H NL+RLL C IE  + +LVYE++ + +L Q L  +     L W               YLH      I HRDIK+SNILLD N   K+ADFGL R   T+ +  +T   GT GYL P+Y     L +K+DVY+FGV++IEI+T  K   F++  S V  +    +      +D  IDP L
Sbjct:  357 DQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVW--EHFKANTLDRSIDPRL 549          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.012e-26
Identity = 63/191 (32.98%), Postives = 108/191 (56.54%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGC-VDEIID 576
            Q   E +++S   H NLLRL+  C    E +LVY +M +G++   L+ +    L W               YLH   +P I HRD+K++NILLD  + + V DFGL++L   E SH++TA +GT G++ P+Y       +K+DV+ FG++L+E+IT ++ ++F +  S+       + ++ +   V+E++D
Sbjct:  340 QFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAK--PALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRKLHKEMKVEELVD 528          
The following BLAST results are available for this feature:
BLAST of FC932050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
PSKR1_DAUCA1.196e-2736.98Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
Y5189_ARATH1.562e-2737.17Probable LRR receptor-like protein kinase At1g5189... [more]
Y1561_ARATH1.562e-2739.53Probable LRR receptor-like serine/threonine-protei... [more]
CRK2_ARATH1.562e-2737.70Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
Y3545_ARATH2.040e-2741.95Probable receptor-like protein kinase At3g55450 OS... [more]
Y5707_ARATH2.664e-2740.68Probable receptor-like protein kinase At5g47070 OS... [more]
FEI1_ARATH3.479e-2737.97LRR receptor-like serine/threonine-protein kinase ... [more]
RPK1_ARATH5.934e-2735.39Probable LRR receptor-like serine/threonine-protei... [more]
CRK1_ARATH7.751e-2739.49Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
Y2239_ARATH1.012e-2632.98Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC34204B03EF PostHarveN Citrus clementina cDNA clone C34204B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932050 ID=FC932050; Name=FC932050; organism=Citrus clementina; type=EST; length=587bp
GTTGACCAAGTTATGAATGAGGGGAAGCTTCTCTCCTCTGGGAGACACCC
AAATCTACTTCGACTCCTAAGGTGCTGCATCGAGGAAGGTGAGCCTATAC
TTGTTTATGAATTTATGCCCCATGGTACTCTGTGTCAGCATCTGCAAAGA
GAGAGAGGAAGTGGACTTCCTTGGACAATACGGATTACCATAGCCACTGA
GACTGCTCAAGCAATTGCCTATCTTCACTCAGCTATGAATCCACCAATTT
ACCACCGAGACATCAAATCCAGCAATATACTATTGGATTACAACTATAGG
TCAAAGGTAGCGGATTTTGGGCTTTCCAGACTTGGCATGACTGAGTCATC
TCACATCTCAACTGCTCCACAAGGAACTCCAGGCTACCTTGATCCTCAAT
ACCATCAGTATTTCCATCTTCCTGACAAAAGTGATGTTTACAGTTTTGGG
GTAGTTCTTATTGAGATCATAACTGCACTGAAAGTGGTTGATTTTTCTCG
CCCTCACAGTGAGGTGAATTTGGCTGCACTTGCTATTGATAGGATTGGAA
GAGGTTGTGTGGATGAGATAATAGATCCATACCTTGA
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