FC932081
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25 Identity = 61/119 (51.26%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 325 GERARMASFVGAMAIADLVKTTLGPKGVDKIL-QSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 G A+ + + A IA+ V+TTLGPKG+DK+L S G ++ VTNDGATIL + +PAAK++V+++K QD E GDGTT+ VV+AGELLR+AE+L+ IHP I G+ +AAE A+ Sbjct: 21 GRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLG---DIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQ 136
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25 Identity = 61/119 (51.26%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 325 GERARMASFVGAMAIADLVKTTLGPKGVDKIL-QSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 G A+ + + A IA+ V+TTLGPKG+DK+L S G ++ VTNDGATIL + +PAAK++V+++K QD E GDGTT+ VV+AGELLR+AE+L+ IHP I G+ +AAE A+ Sbjct: 21 GRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLG---DIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQ 136
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25 Identity = 61/119 (51.26%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 325 GERARMASFVGAMAIADLVKTTLGPKGVDKIL-QSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 G A+ + + A IA+ V+TTLGPKG+DK+L S G ++ VTNDGATIL + +PAAK++V+++K QD E GDGTT+ VV+AGELLR+AE+L+ IHP I G+ +AAE A+ Sbjct: 21 GRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLG---DIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQ 136
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25 Identity = 58/125 (46.40%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 295 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKIL-QSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAA 666 I + + G A+ + + +A+ V+TTLGPKG+DK+L S G ++ +TNDG TIL+ I +PAAK+LV+++K Q+DEVGDGTT+ V++AGELL+EAEKL+ +HP G+R AA Sbjct: 10 ILPQDTSRYVGREAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLG---DIVITNDGVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHPTIIALGYRNAA 131
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25 Identity = 60/125 (48.00%), Postives = 88/125 (70.40%), Query Frame = 1 Query: 301 RDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKILQSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECA 675 +++ + +G A A+ A AIA +++T+LGPKG+DK+LQS +VT+TNDGATIL+ +DN AK+LV++S+ QD ++GDGTT VVV+AG LL +AEKL+ IHP+ G+ MA+ A Sbjct: 18 QEKKSRLQGLDAHKANIAAAKAIARILRTSLGPKGMDKMLQSPDG--DVTITNDGATILELMDVDNQIAKLLVELSRSQDYDIGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASRIA 140
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25 Identity = 60/116 (51.72%), Postives = 87/116 (75.00%), Query Frame = 1 Query: 325 GERARMASFVGAMAIADLVKTTLGPKGVDKIL-QSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAE 669 GE R + + A +IA++VK++LGP G+DK+L G +VT+TNDGATILK +++PAAKVL +++ +QD EVGDGTTSVV++A ELL+ A++L KIHP + ISG+R+A + Sbjct: 14 GEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIG---DVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACK 126
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25 Identity = 60/119 (50.42%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 325 GERARMASFVGAMAIADLVKTTLGPKGVDKIL-QSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 G A+ + + A IA+ V+TTLGPKG+DK+L S G ++ +TNDGATIL I +PAAK++V+++K QD E GDGTT+ VV+AGELL++AE+L+ IHP I G+ +AAE A+ Sbjct: 21 GRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLG---DIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIVIKGYMLAAEKAQ 136
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25 Identity = 62/114 (54.39%), Postives = 84/114 (73.68%), Query Frame = 1 Query: 325 GERARMASFVGAMAIADLVKTTLGPKGVDKIL-QSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMA 663 GE R + + AIA++VK++LGP G+DK+L G +VTVTNDGATIL +++PA KVLV++++ QD EVGDGTTSVV++A ELLR A +LV KIHP T I+G+R+A Sbjct: 19 GEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIG---DVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLA 129
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.674e-25 Identity = 60/129 (46.51%), Postives = 88/129 (68.22%), Query Frame = 1 Query: 295 IFRDEANEEK--GERARMASFVGAMAIADLVKTTLGPKGVDKILQSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECA 675 + RD+ +E+ G A + + A I++++K++LGPKG+DK++ S + EV VTNDGATIL++ +DN AK++V +SK QDDE+GDGTT VVVLAG LL +AE+L+ IHP G+ A + A Sbjct: 14 VIRDQQAKERLRGIEAHRSHILAAKTISNIMKSSLGPKGMDKMMVS--QDGEVLVTNDGATILENMQVDNQIAKLMVQLSKSQDDEIGDGTTGVVVLAGSLLEQAEQLIEKGIHPCRIYEGYETACKIA 140
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.410e-25 Identity = 58/119 (48.74%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 325 GERARMASFVGAMAIADLVKTTLGPKGVDKIL-QSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 G A+ + + A +A+ ++TTLGPKG+DK+L S G ++ +TNDGATIL I +PAAK++V+++K QD E GDGTT+ VV+AGELL++AE+L+ IHP I G+ +AAE A+ Sbjct: 21 GRDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLG---DIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYALAAEKAQ 136 The following BLAST results are available for this feature:
BLAST of FC932081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 440
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932081 ID=FC932081; Name=FC932081; organism=Citrus clementina; type=EST; length=679bpback to top |