FC932179

Overview
NameFC932179
Unique NameFC932179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932179 vs. ExPASy Swiss-Prot
Match: Y522_RICBR (Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain RML369-C) GN=RBE_0522 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 54/222 (24.32%), Postives = 103/222 (46.40%), Query Frame = 1
Query:    4 KDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGGYA 669
            ++ N AL I+ADI+QNS F +  I +E  VIL+           ++++  + + F+  PLG+ ILG ++ I+T  ++H   +   HY A    ++ +G             LF+ L     T  +     PA + G     I+ D+      + F G S+ + + +    + A++     +S   +H+  +L        +A ++ ++N+ Y D+G+F  YA
Sbjct:   96 ENCNKALAIIADIVQNSAFAEEEIAKEYQVILQEIAHAQDNPDDLVYEKFYNSVFKDQPLGKPILGTSKTIETFNRDHFLKFTGKHYNAENFYLSIAGNVDHEEIVKEAERLFSSL-----TQGEKSNFSPAKYIGGH-SFINKDLEQTTLILGFEGTSYINLERLYQTQLLAIIFGGGMSSRLFQHIREKLG-------LAYAVGSYNSPYFDSGVFTIYA 304          
BLAST of FC932179 vs. ExPASy Swiss-Prot
Match: Y293_RICCN (Uncharacterized zinc protease RC0293 OS=Rickettsia conorii GN=RC0293 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 53/222 (23.87%), Postives = 107/222 (48.20%), Query Frame = 1
Query:    4 KDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGGYA 669
            ++ + AL+ILADI+QNS F    I +E  VI++           ++++  +   ++  PLG++ILG A+ + T TKEH  N+I  +Y A  + ++ +G             LF+ L       S  +   PA + G     I+ ++      + F G S+ + + +    + +++     +S     +   + +++G   +A ++ ++N+ Y D+G+F  YA
Sbjct:   96 ENCDKALNILADIIQNSIFSDEEIAKEYQVIMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILGTAKTLATFTKEHFFNFIDKYYNAANLYLSIAGNIDHDKIVIIAEQLFSSLKQG--VKSSFI---PAKYIGGN-GFINKELEQTSLVLGFEGTSYINLEKLYQTHLLSIIFGGGMSS----RLFQSIREKLG---LAYAVGSYNSAYFDSGVFTIYA 304          
BLAST of FC932179 vs. ExPASy Swiss-Prot
Match: Y210_RICTY (Uncharacterized zinc protease RT0210 OS=Rickettsia typhi GN=RT0210 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13
Identity = 52/222 (23.42%), Postives = 105/222 (47.30%), Query Frame = 1
Query:    4 KDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGGYA 669
            ++ + AL+ILADI+QNS F    I++E  +I++           +I++  + T ++  PLG++ILG A+ +   T+EH  N+I  HY A  + ++ +G             LF  L    T++       PA + G +   I  ++      + F   S+ + + +    + +++     +S     +   + +++G+  +  S   +N+ Y D+G+F  YA
Sbjct:   96 ENCHKALNILADIIQNSIFADEEISKEYQIIMQEIAHHHDNPDDLIYETFYNTVYKDQPLGKSILGTAKTLVKFTQEHFLNFIGKHYNAENLYLSIAGNIEHNKIVIIAEELFASLKQGVTSSF-----IPAKYIGGK-GFIHKELEQTSLVLGFECTSYINLEKLYQTYLLSIIFGGGVSS----RLFQSIREKLGLAYVVGS---YNSAYFDSGVFTIYA 304          
BLAST of FC932179 vs. ExPASy Swiss-Prot
Match: Y5738_STRCO (Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor GN=SCO5738 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.024e-13
Identity = 60/237 (25.32%), Postives = 95/237 (40.08%), Query Frame = 1
Query:    1 DKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLV---ANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINE-IAESMMAFNTNYKDTGLFGGYAVAKPGCLDDL 699
            D D+  A+D++ D+L  S   +  +  ER  IL             + D    T F    LGR +LG    +  +T + ++ +   HY    +V+AA+G              F K  A    A+Q +   A    +     V +I      A   +   G + TD    A+ V+   LG       GG  M S L Q V     +A S+ ++ + + D GLFG YA  +P  + D+
Sbjct:  125 DTDLPLAIDVVCDMLTGSLIQEEDVDVERGAILEEIAMTEDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIRRFYRKHYDPTHLVVAAAGNVDHNKVVRQVRAAFEKSGALKDPAAQPLAPRAGRRTVRAAGRVELIGRKTEQAHVILGMPGLARTDERRWAMGVLNTALG-------GG--MSSRLFQEVREKRGLAYSVYSYTSGFADCGLFGVYAGCRPSQVHDV 352          
BLAST of FC932179 vs. ExPASy Swiss-Prot
Match: Y219_RICPR (Uncharacterized zinc protease RP219 OS=Rickettsia prowazekii GN=RP219 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.024e-13
Identity = 53/222 (23.87%), Postives = 102/222 (45.95%), Query Frame = 1
Query:    4 KDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGGYA 669
            ++ + AL+ILADI+QNS F    I +E  +I++           +I++  + T ++  PLG++ILG  + + T TKEH  N+I  HY A  + ++ +G             LF  L       S  +   PA + G +   I  ++      + F   S+ +   +    + +++     +S     +   + +++G+  +  S   +N+ Y D+G+F  YA
Sbjct:   96 ENCHKALNILADIIQNSIFADEEIAKEYQIIMQEIAHHHDNPDDLIYETFYNTVYKGQPLGKSILGTTKTLVTFTKEHFLNFIGKHYNAENLYLSIAGNIEHNKIVMIAEELFASLKQG--VKSSFI---PAKYIGGK-GFIHKELEQTSLVLGFECTSYINLGQLYQTYLLSIIFGGGMSS----RLFQSIREKLGLAYVVGS---YNSAYFDSGVFTIYA 304          
BLAST of FC932179 vs. ExPASy Swiss-Prot
Match: MPPA_SOLTU (Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 57/223 (25.56%), Postives = 102/223 (45.74%), Query Frame = 1
Query:   10 VNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAF--AGASWTDPDSIALMVMQAMLGSWNKNSVG--GKHMGSELAQRVGINEIAE--SMMAFNTNYKDTGLFG 660
            V   +++LAD ++N  F    +  + + +             ++ + +H+  +   P G +++     I  +    L+ ++  +YTAPRMV+AASG                 LS  P  A+  +     ++ G + R    D  +  FA+AF   G   ++ +S+ L V+Q ++G     S G  GK M S L  RV +N+  +  +  AF++ Y +TGLFG
Sbjct:  167 VPQMVEMLADCVRNPAFLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHSAGYA-GPYGNSLMATEATINRLNSTVLEEFVAENYTAPRMVLAASGVEHEEFLKVAEPL----LSDLPKVAT--IEEPKPVYVGGDYR-CQADAEMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRV-LNQYPQIHAFSAFSSIYNNTGLFG 380          
The following BLAST results are available for this feature:
BLAST of FC932179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
Y522_RICBR6.249e-1424.32Uncharacterized zinc protease RBE_0522 OS=Ricketts... [more]
Y293_RICCN6.249e-1423.87Uncharacterized zinc protease RC0293 OS=Rickettsia... [more]
Y210_RICTY5.290e-1323.42Uncharacterized zinc protease RT0210 OS=Rickettsia... [more]
Y5738_STRCO9.024e-1325.32Uncharacterized zinc protease SCO5738 OS=Streptomy... [more]
Y219_RICPR9.024e-1323.87Uncharacterized zinc protease RP219 OS=Rickettsia ... [more]
MPPA_SOLTU4.952e-1125.56Mitochondrial-processing peptidase subunit alpha O... [more]

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Properties
Property NameValue
Genbank descriptionC34205E02EF PostHarveN Citrus clementina cDNA clone C34205E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932179 ID=FC932179; Name=FC932179; organism=Citrus clementina; type=EST; length=700bp
GATAAGGATGTGAATAATGCTTTGGATATTTTGGCAGATATTTTGCAGAA
CTCGACGTTTGATCAAGCGAGGATCACCAGGGAACGGGATGTTATTTTGA
GAGAAATGGAGGAGGTTGAGGGGCAAACAGAGGAAGTCATTTTTGATCAT
TTGCATGCAACTGCATTCCAGTACACTCCTTTGGGGAGAACTATTCTCGG
TCCTGCTCAGAATATCAAGACAATCACAAAAGAACATCTGCAGAACTATA
TTCACACTCACTATACTGCTCCCAGAATGGTGATTGCTGCTTCTGGAGCT
GTGAAGCATGAAGAAGTTGTTGAGCAAGTGAAGAAATTGTTCACAAAATT
ATCAGCGGATCCAACCACTGCTTCTCAATTAGTTGCAAATGAACCAGCAA
TTTTCACTGGTTCTGAGGTTAGAATAATTGATGACGATATTCCTTTGGCA
CAATTTGCGGTTGCTTTCGCTGGAGCATCTTGGACAGATCCAGATTCAAT
TGCCCTGATGGTTATGCAGGCAATGTTGGGTTCATGGAATAAAAATTCAG
TGGGTGGAAAGCACATGGGTTCCGAGCTGGCACAGAGAGTTGGCATTAAT
GAAATTGCAGAAAGCATGATGGCCTTCAACACGAACTACAAAGACACTGG
TCTGTTTGGTGGTTATGCTGTTGCTAAGCCCGGATGCTTAGATGATTTGG
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