FC932190

Overview
NameFC932190
Unique NameFC932190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.490e-33
Identity = 67/136 (49.26%), Postives = 94/136 (69.12%), Query Frame = 3
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAP--FDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ MK    + ++R+AF+V DKD  GF+S ++LRH++T++GEKL   E DE IRE D+  DG++ YE+F+  M +K
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_PLEOS (Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.490e-33
Identity = 67/136 (49.26%), Postives = 96/136 (70.59%), Query Frame = 3
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ M+    + ++++AFKV DKD  G++S ++LRH++T++GEKL  +E DE IRE DV  DG+I YE+F+  M++K
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADVDGDGQINYEEFVKMMLSK 149          
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_PHYPO (Calmodulin OS=Physarum polycephalum PE=2 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.490e-33
Identity = 67/136 (49.26%), Postives = 94/136 (69.12%), Query Frame = 3
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ M     + ++R+AFKV DKD  GF+S ++LRH++T++GEKL   E DE IRE DV  DG++ Y++F+  M++K
Sbjct:   14 KEAFSLFDKDGDGNITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMADTDTEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQVNYDEFVKMMLSK 149          
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_EPIAK (Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.490e-33
Identity = 67/136 (49.26%), Postives = 94/136 (69.12%), Query Frame = 3
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ MK    + ++R+AF+V DKD  G++S ++LRH++T++GEKL   E DE IRE D+  DG++ YE+F+  M AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQIMTAK 149          
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSJ (Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CAM3 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.490e-33
Identity = 69/136 (50.74%), Postives = 96/136 (70.59%), Query Frame = 3
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL+LMA+ MK    + +L++AF+V DKD  GF+S ++LRH++T++GEKL   E +E IRE DV  DG+I Y++F+  M+AK
Sbjct:   14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYDEFVKVMMAK 149          
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_SACJA (Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.945e-33
Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = 3
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L  +I+E         DFP FL +MA+ MK    + ++ +AFKV DKD  GF+S ++LRHI+T++GEKL   E DE IRE D+  DG+I YE+F+  M++K
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149          
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.945e-33
Identity = 66/136 (48.53%), Postives = 96/136 (70.59%), Query Frame = 3
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ M+    + ++++AFKV DKD  G++S ++LRH++T++GEKL  +E DE IRE D+  DG+I YE+F+  M++K
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADIDGDGQINYEEFVKMMLSK 149          
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_CIOIN (Calmodulin OS=Ciona intestinalis PE=2 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 1.945e-33
Identity = 68/136 (50.00%), Postives = 93/136 (68.38%), Query Frame = 3
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ MK    + ++R+AF+V DKD  GF+S ++LRH++T++GEKL   E DE IRE DV  DG++ YE+F+  M  K
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVNMMTNK 149          
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_PARTE (Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 2.541e-33
Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 3
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL LMA+ MK +  + +L +AFKV D+D  G +S ++LRH++T++GEKL   E DE IRE D+  DG I YE+F+  MV+K
Sbjct:   14 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 149          
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM2_BRAFL (Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=2 SV=4)

HSP 1 Score: 142.124 bits (357), Expect = 2.541e-33
Identity = 67/136 (49.26%), Postives = 92/136 (67.65%), Query Frame = 3
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+ +L+ +I+E         DFP FL +MA+ MK    + ++R+AFKV DKD  GF+S ++LRH++T+ GEKL   E DE IRE D+  DG++ YE+F+  M +K
Sbjct:   14 KEAFSLFDKDGNGNITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDKDGNGFISAAELRHVMTNPGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          
The following BLAST results are available for this feature:
BLAST of FC932190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
CALM_RENRE1.490e-3349.26Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_PLEOS1.490e-3349.26Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=... [more]
CALM_PHYPO1.490e-3349.26Calmodulin OS=Physarum polycephalum PE=2 SV=3[more]
CALM_EPIAK1.490e-3349.26Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3[more]
CALM3_ORYSJ1.490e-3350.74Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM_SACJA1.945e-3350.74Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1[more]
CALM_PLECO1.945e-3348.53Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S... [more]
CALM_CIOIN1.945e-3350.00Calmodulin OS=Ciona intestinalis PE=2 SV=3[more]
CALM_PARTE2.541e-3350.74Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 S... [more]
CALM2_BRAFL2.541e-3349.26Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34205F01EF PostHarveN Citrus clementina cDNA clone C34205F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932190 ID=FC932190; Name=FC932190; organism=Citrus clementina; type=EST; length=682bp
GCATGAAGGAAGCCTTCACATTGTTCGACACAGACGGTGGCGGAAAGATC
GCGCCGTCTGAGCTAGGGATCCTAATGAGGTCACTTGGGGGAAACCCGAC
CCAGGCCCAGCTCAAATCCATAATCTCCGAGGAAAAACTAACGGCACCCT
TTGACTTCCCGCGGTTCCTTGACCTGATGGCCAAGCACATGAAACCTGAG
CCCTTCGATCGCCAGTTGCGTGACGCCTTCAAAGTGCTGGATAAAGATAA
CACCGGCTTCGTCTCCGTCTCCGATCTACGACACATTCTCACTTCTATTG
GGGAGAAGCTGGAGCCTTCCGAGTTTGATGAGTGGATCCGGGAAGTGGAT
GTCGGGTCCGACGGCAAGATCAAGTACGAGGATTTTATTGCCCGGATGGT
GGCCAAGTGACCTGTGATTGGATCTTCAACTTTAAGATATGATTAATGGG
TGTCTGTTTATTTTTAATGTTTTCTGCAATTAATGTTGAGTTTTGTGTAC
CTTTCTGTTTTAATGTGATGGATTTTGATGGTATTTCTTGAATTGTTGAA
AGTAATGCTGACCTTTTGTTAGGTATTTTTTTACATTCTGAACTTTGATG
TTATGTGTAATATATAATGTGTAGATGTTTCTTGAAATGAATTGGTTTAT
TAATGACAAANAAAAAAAAAAAAAAAAAAAAA
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