FC932230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_CHRVO (Fumarate hydratase class II OS=Chromobacterium violaceum GN=fumC PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 4.363e-34 Identity = 79/150 (52.67%), Postives = 101/150 (67.33%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 RSL +F I E+ MP ++ A +K+ A+ N G LD A AI AA EV G+ + FPL VWQTGSGTQSNMN NEV+ANRA+E+LG +RG ++VHPND VN QSSND FPT MH+AAA RL+P+L +L ++L SK+ Sbjct: 29 RSLAHFRISSEK--MPPELILALARVKRACAEANRGLGKLDDAKAAAIAGAADEVLAGRHDGEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGRRGPGRLVHPNDDVNLGQSSNDIFPTAMHVAAATQVKERLLPSLDLLRHALESKA 176
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_METAC (Fumarate hydratase class II OS=Methanosarcina acetivorans GN=fumC PE=3 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 1.270e-33 Identity = 80/150 (53.33%), Postives = 100/150 (66.67%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAI-GKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 RSL +F IG + MP+ + A+G +KK AA VN G+ P + I + A EV GKL+ FPL VWQTGSGTQSNMN NEVI+NRA +++G G K VHPND VN SQSSNDTFPT MHIA ++RLIP + VL S+ +K+ Sbjct: 40 RSLIHFSIGDDY--MPKEVYHAYGYVKKAAALVNEAAGIIPPWKAELIARVADEVIAGKLDSEFPLYVWQTGSGTQSNMNVNEVISNRAIQLVGGSLGSKHPVHPNDDVNMSQSSNDTFPTAMHIATVLEFSNRLIPAVTVLEESIWAKA 187
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_HAEIN (Fumarate hydratase class II OS=Haemophilus influenzae GN=fumC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.658e-33 Identity = 80/150 (53.33%), Postives = 97/150 (64.67%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQ-AAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 RS NF IG MP I+ AFG LKK AA N + G+ P + ++ A E+ KL+D FPLV+WQTGSGTQSNMN NEV+ANRA + G K GEK I+HPND VN+SQSSNDTFPT MHIAA IP ++ L + +KS Sbjct: 27 RSRNNFKIGPAAS-MPHEIIEAFGYLKKAAAFANHDLGVLPLEKRDLIALACDEILANKLDDQFPLVIWQTGSGTQSNMNVNEVVANRAHVLNGGKLGEKSIIHPNDDVNKSQSSNDTFPTAMHIAAYKKVVEHTIPCVERLQKTFAAKS 175
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_CHLCV (Fumarate hydratase class II OS=Chlamydophila caviae GN=fumC PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.824e-33 Identity = 74/137 (54.01%), Postives = 91/137 (66.42%), Query Frame = 1 Query: 37 ERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSK 441 E MP+ ++RA ++K+CAAK N + G LD I+ AA E+ EG +HFPL VWQTGSGTQSNMN NEVIAN A + G G K +HPNDHVN+SQSSND FPT MHIAA +LIP + L +L +K Sbjct: 35 EVMPKEVIRALVLIKQCAAKANHDLGFLDSKYCDMIVSAASEILEGGFEEHFPLKVWQTGSGTQSNMNVNEVIANLAIQRHGGVVGSKTPIHPNDHVNKSQSSNDVFPTAMHIAAVINLKKKLIPAMDHLQRALDAK 171
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_STAAR (Fumarate hydratase class II OS=Staphylococcus aureus (strain MRSA252) GN=fumC PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 6.301e-33 Identity = 74/148 (50.00%), Postives = 97/148 (65.54%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSK 441 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L ++ +HPND VN+SQSSNDTFPT MH+A ++L P LK+L N+L K Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHHSDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEK 172
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_STAAC (Fumarate hydratase class II OS=Staphylococcus aureus (strain COL) GN=fumC PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 6.301e-33 Identity = 74/148 (50.00%), Postives = 98/148 (66.22%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSK 441 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN+SQSSNDTFPT MH+A ++L P LK+L N+L K Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAAIANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHQSDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEK 172
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_HALSA (Fumarate hydratase class II OS=Halobacterium salinarium GN=fumC PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 8.229e-33 Identity = 75/149 (50.34%), Postives = 99/149 (66.44%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 R+++NF I G VRA G++KK AA+ N + GL D AI+ AA EV G+ +D FP+ V+QTGSGT SNMNANEVIANRAAE+LG + G+++VHPNDHVN QSSND PT MH+A+ + + + P L+ L L K+ Sbjct: 29 RAIENFPISGIA--FGRRFVRALGVVKKAAAQANRDLGLVDDERADAIVAAADEVIAGEHDDQFPVDVFQTGSGTSSNMNANEVIANRAAELLGEEIGDRVVHPNDHVNYGQSSNDVIPTAMHVASLDALVNDVKPGLETLAAELDDKA 175
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_STAAW (Fumarate hydratase class II OS=Staphylococcus aureus (strain MW2) GN=fumC PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.404e-32 Identity = 74/148 (50.00%), Postives = 98/148 (66.22%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSK 441 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN+SQSSNDTFPT MH+A ++L P LK+L N+L K Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHQIDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEK 172
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_STAAS (Fumarate hydratase class II OS=Staphylococcus aureus (strain MSSA476) GN=fumC PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.404e-32 Identity = 74/148 (50.00%), Postives = 98/148 (66.22%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSK 441 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN+SQSSNDTFPT MH+A ++L P LK+L N+L K Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHQIDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEK 172
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_HELPY (Fumarate hydratase class II OS=Helicobacter pylori GN=fumC PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.404e-32 Identity = 77/150 (51.33%), Postives = 102/150 (68.00%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEIL-GHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 RSL+NF IG E+MP+ ++ AF LK+ A VN + G L +AI++A + +G+L FPL +WQTGSGTQ+NMN NEVIAN+A EIL G+ R +K++HPND VN SQSSNDTFPT MHI + RL+P+L+ L + KS Sbjct: 27 RSLENFKIG--TEKMPKELIGAFAKLKRSLAVVNHKLGKLSLEKSQAIIKACDCILKGELCGEFPLAIWQTGSGTQTNMNLNEVIANKATEILGGNFREKKLIHPNDDVNMSQSSNDTFPTAMHIVSVLEITHRLLPSLENLLKTFKEKS 174 The following BLAST results are available for this feature:
BLAST of FC932230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932230 ID=FC932230; Name=FC932230; organism=Citrus clementina; type=EST; length=446bpback to top |