FC932241

Overview
NameFC932241
Unique NameFC932241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_DICDI (NADH-cytochrome b5 reductase 1 OS=Dictyostelium discoideum GN=cyb5r1 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.215e-38
Identity = 75/163 (46.01%), Postives = 112/163 (68.71%), Query Frame = 3
Query:  168 KKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            K+ + +LDP+ +++F+L ++  ++HN   F F LP    +LGLPIGQHIS R     G+EV +PYTP + D + G+F+L+IK+Y +G MS +   M +GD + VKGPKG+F YQP   ++ GM AGG+GITPM QV +AIL+    +T++ L++ N+T  DIL
Sbjct:   43 KQVEKALDPQEYRKFQLKEKFIVNHNTRIFRFALPNEDDILGLPIGQHISLRAVVG-GKEVYRPYTPISSDEERGYFDLLIKVYEKGAMSGYVDNMFIGDSIEVKGPKGKFNYQPNMRKSIGMLAGGTGITPMLQVIKAILKNPSDKTEISLVFGNITEEDIL 204          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPTN (NADH-cytochrome b5 reductase 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.505e-38
Identity = 78/170 (45.88%), Postives = 109/170 (64.12%), Query Frame = 3
Query:  165 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKT-----Q*QTKVHLIYANVTYXDIL 656
            S KP+  L+P  F+ F L ++  +SHNVA + F LP PT +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   +++GD L V+GPKG   Y P   R  GM AGG+GITPM Q+ +AI+           TK+ LI+ANV   DIL
Sbjct:   37 SSKPRKVLNPSEFQNFVLKEKTDISHNVAIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTLKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGGNDTTKIDLIFANVNEEDIL 206          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_USTMA (NADH-cytochrome b5 reductase 1 OS=Ustilago maydis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.390e-38
Identity = 76/166 (45.78%), Postives = 113/166 (68.07%), Query Frame = 3
Query:  159 YSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            + S+K K  L+P  +++++L+++ +LS N A + F+LP   ++LGLPIGQHIS +  +  G+ V++ YTPT+ D D G F+LV+K Y QG +S +   M++GD L+VKGPKG+ RY PG  R  GM AGG+G+TP  Q+ RA L+    +T++  IYANV   DIL
Sbjct:   69 FDSQKIKPVLNPTQWQQYRLMEKQKLSDNTALYRFKLPRSNNILGLPIGQHISVQA-NMGGKTVVRSYTPTSSDDDHGFFDLVVKSYEQGNVSKYIGSMKIGDLLSVKGPKGQMRYAPGLSRHIGMIAGGTGLTPCLQIIRAALKNPADKTQIDFIYANVKETDIL 233          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_MORAP (NADH-cytochrome b5 reductase 1 OS=Mortierella alpina GN=CBR1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37
Identity = 74/157 (47.13%), Postives = 106/157 (67.52%), Query Frame = 3
Query:  186 LDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +DP+ +++FKLV ++  S N A + F LP    +L LPIGQHIS    +  G+++ + YTPT+   DVGHF L IK YPQG +S  F E+ +GD +  +GPKG+F Y P   RA GM AGG+G+TPM Q+ RAI++  + +T+V+ I+ANVT  DI+
Sbjct:   53 MDPKEYRKFKLVDKVHCSPNTAMYKFALPHEDDLLNLPIGQHISIMA-NINGKDISRSYTPTSSSDDVGHFVLCIKSYPQGNISKMFSELSIGDSINARGPKGQFSYTPNMCRAIGMIAGGTGLTPMLQIIRAIVKNPEDKTQVNFIFANVTEEDII 208          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_COCIM (NADH-cytochrome b5 reductase 1 OS=Coccidioides immitis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37
Identity = 79/170 (46.47%), Postives = 107/170 (62.94%), Query Frame = 3
Query:  165 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKT-----Q*QTKVHLIYANVTYXDIL 656
            S KP+  L+P  F+ F L  +  +SHNV  + F LP PT +LGLPIGQHIS       Q +E+++ YTP + D D G+F+L++K YPQG +S H   +R+GD + V+GPKG   Y P  VR  GM AGG+GITPM QV +AI++          T++ LI+ANV   DIL
Sbjct:   49 SNKPRKVLNPTEFQNFVLKDKTIVSHNVCIYRFALPRPTDILGLPIGQHISLAATIPGQSKEIVRSYTPISSDDDAGYFDLLVKSYPQGNISKHLTTLRIGDKMKVRGPKGAMVYTPNMVRHIGMIAGGTGITPMLQVIKAIIKGRPRNGGNDTTQIDLIFANVNPDDIL 218          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPCL (NADH-cytochrome b5 reductase 1 OS=Aspergillus clavatus GN=cbr1 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37
Identity = 82/170 (48.24%), Postives = 110/170 (64.71%), Query Frame = 3
Query:  165 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*Q-----TKVHLIYANVTYXDIL 656
            SK  KV L+P  F+EF L ++  +SHNV+ + F LP PT +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S H   ++VGD + V+GPKG   Y P   R  GM AGG+GITPM QV +AI+           TKV LI+ANV   DIL
Sbjct:   51 SKARKV-LNPTEFQEFVLKEKTDISHNVSIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKHLTTLKVGDVMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQVIKAIIRNRPRNGGTDITKVDLIFANVNPEDIL 219          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_PHANO (NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria nodorum GN=CBR1 PE=3 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.602e-37
Identity = 84/170 (49.41%), Postives = 111/170 (65.29%), Query Frame = 3
Query:  156 LYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAIL--EKTQ*QTKVHLIYANVTYXDIL 656
            +YSS   KV L P  F+EF+L ++  LSHN A + F+LP  T +LGLPIGQHIS     + Q +EV++ YTP + D D GHF+L+IK YP G +S +   ++VG+ + VKGPKG   Y P  VR FGM +GG+GITPM QV +AI+        T+V LI+ANV   DIL
Sbjct:   24 VYSSGSKKV-LKPNEFQEFELEEKTVLSHNTAIYRFKLPRKTDILGLPIGQHISLGATIEGQPKEVVRSYTPISSDEDKGHFDLLIKSYPTGNISKYVANLKVGEKMRVKGPKGAMVYTPNMVRHFGMISGGTGITPMLQVVKAIIRGRGQGDTTEVDLIFANVNPEDIL 192          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPOR (NADH-cytochrome b5 reductase 1 OS=Aspergillus oryzae GN=cbr1 PE=3 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.092e-37
Identity = 78/174 (44.83%), Postives = 112/174 (64.37%), Query Frame = 3
Query:  153 YLYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKT-----Q*QTKVHLIYANVTYXDIL 656
            +L  S KP+  L+P  F+ F L ++ ++SHNVA + F LP PT +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   +++GD + V+GPKG   Y P   R  GM AGG+GITPM Q+ +AI+           T+V LI+ANV   DIL
Sbjct:   29 FLGGSGKPRKVLNPTEFQNFVLKEKNEISHNVAIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDNMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGGNDTTQVDLIFANVNPEDIL 202          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPFU (NADH-cytochrome b5 reductase 1 OS=Aspergillus fumigatus GN=cbr1 PE=3 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 4.660e-37
Identity = 75/168 (44.64%), Postives = 109/168 (64.88%), Query Frame = 3
Query:  171 KPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKT-----Q*QTKVHLIYANVTYXDIL 656
            KP+  L+P  F+EF L +++ +SHNV  + F LP PT +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   +++GD + V+GPKG   Y P   R  GM AGG+GITPM Q+ +A++           TK+ LI+ANV   DIL
Sbjct:   52 KPRKVLNPTEFQEFVLKEKIDVSHNVCIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAVIRNRPRNGGNDTTKLDLIFANVNPDDIL 219          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_EMENI (NADH-cytochrome b5 reductase 1 OS=Emericella nidulans GN=cbr1 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.038e-36
Identity = 77/170 (45.29%), Postives = 108/170 (63.53%), Query Frame = 3
Query:  165 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKT-----Q*QTKVHLIYANVTYXDIL 656
            S KP+  L+P  F+ F L ++  +SHNV  + F LP PT +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   ++VGD + V+GPKG   Y P   R  GM AGG+GITPM Q+ +AI+           T+V LI+ANV   DIL
Sbjct:   54 SSKPRKVLNPNEFQNFVLKEKNDISHNVTIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKVGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGGNDTTQVDLIFANVNPDDIL 223          
The following BLAST results are available for this feature:
BLAST of FC932241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
NCB5R_DICDI4.215e-3846.01NADH-cytochrome b5 reductase 1 OS=Dictyostelium di... [more]
NCB5R_ASPTN5.505e-3845.88NADH-cytochrome b5 reductase 1 OS=Aspergillus terr... [more]
NCB5R_USTMA9.390e-3845.78NADH-cytochrome b5 reductase 1 OS=Ustilago maydis ... [more]
NCB5R_MORAP1.226e-3747.13NADH-cytochrome b5 reductase 1 OS=Mortierella alpi... [more]
NCB5R_COCIM1.226e-3746.47NADH-cytochrome b5 reductase 1 OS=Coccidioides imm... [more]
NCB5R_ASPCL1.226e-3748.24NADH-cytochrome b5 reductase 1 OS=Aspergillus clav... [more]
NCB5R_PHANO1.602e-3749.41NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria no... [more]
NCB5R_ASPOR2.092e-3744.83NADH-cytochrome b5 reductase 1 OS=Aspergillus oryz... [more]
NCB5R_ASPFU4.660e-3744.64NADH-cytochrome b5 reductase 1 OS=Aspergillus fumi... [more]
NCB5R_EMENI1.038e-3645.29NADH-cytochrome b5 reductase 1 OS=Emericella nidul... [more]

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Properties
Property NameValue
Genbank descriptionC34206C01EF PostHarveN Citrus clementina cDNA clone C34206C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932241 ID=FC932241; Name=FC932241; organism=Citrus clementina; type=EST; length=658bp
TATATACATATATTGACAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAG
CTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCA
GCTTCTCGTTGGTGGAGCTGTGGCTGTTCTGGCCATTGCTGTTGGTGCTG
CTTACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAAT
TTCAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGC
AAAGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAA
TTGGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTT
ATTAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGA
ATTGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTG
AGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTC
AGGTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTC
TGGCATCACTCCAATGTTCCAAGTTACTAGAGCCATATTAGAGAAAACCC
AATGACAGACAAAGGTGCACCTCATTTATGCCAATGTTACATATGANGAC
ATTCTTTT
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