FC932241

Overview
NameFC932241
Unique NameFC932241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_CRYNE (NADH-cytochrome b5 reductase 1 OS=Cryptococcus neoformans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.038e-36
Identity = 74/168 (44.05%), Postives = 109/168 (64.88%), Query Frame = 3
Query:  153 YLYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +++  +K +  LDP  ++ FKLV +  LSHN A + F LP  +  LGLPIGQHIS    +  G++V++ YTPTTLD D GHF+LV+K Y +G +S +   + +G  + VKGPKG+F Y P       M AGG+GITPM+Q+ ++ ++    +T++ LIYAN+   DIL
Sbjct:   30 FIFFQEKDRKVLDPVEWRSFKLVDKDHLSHNTALYRFALPRASDSLGLPIGQHISVAA-EINGKQVVRSYTPTTLDDDKGHFDLVVKTYEKGNISRYLSLLTIGQEIKVKGPKGKFVYTPNMAPHLVMIAGGTGITPMYQIIKSSIKTPGDKTRLSLIYANIQEDDIL 196          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_NEOFI (NADH-cytochrome b5 reductase 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=cbr1 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36
Identity = 74/168 (44.05%), Postives = 107/168 (63.69%), Query Frame = 3
Query:  171 KPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKT-----Q*QTKVHLIYANVTYXDIL 656
            KP+  L+P  F+EF L ++  +SHNV  + F LP P  +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   +++GD + V+GPKG   Y P   R  GM AGG+GITPM Q+ +A++           TK+ LI+ANV   DIL
Sbjct:   52 KPRKVLNPTEFQEFVLKEKTDISHNVCIYRFALPRPADILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAVIRNRPRNGGNDTTKLDLIFANVNPDDIL 219          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_AJECN (NADH-cytochrome b5 reductase 1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.945e-36
Identity = 77/173 (44.51%), Postives = 113/173 (65.32%), Query Frame = 3
Query:  156 LYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKT-----Q*QTKVHLIYANVTYXDIL 656
            ++S+++ KV L+P  F+ F+L ++  +SHNVA + F LP PT +LGLPIGQHIS     + Q +E+++ YTP + D + G+F+L++K YPQG +S H   +R+G  + V+GPKG   Y P  V+  GM AGG+GITPM Q+ +AI+           T+V LI+ANV   DIL
Sbjct:   49 VFSNRQRKV-LNPTEFQNFELKEKTIVSHNVAIYRFALPRPTDILGLPIGQHISLAATIEGQTKEIMRSYTPISSDQEAGYFDLLVKAYPQGNISKHLAGLRIGQTMKVRGPKGAMVYTPNMVKKIGMIAGGTGITPMLQIIKAIIRGRPRNGGNDTTQVDLIFANVNPDDIL 220          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPNC (NADH-cytochrome b5 reductase 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36
Identity = 76/169 (44.97%), Postives = 107/169 (63.31%), Query Frame = 3
Query:  165 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKT-----Q*QTKVHLIYANVTYXDIL 656
            S KP+  L+P +F+ F L ++  +SHNV  + F LP PT +LGLPIGQHIS       G+EV++ YTP + D++ G+F+L++K YPQG +S +   + VG  + V+GPKG   Y P   R  GM AGG+GITPM+Q+ +AI+           T+V LI+ANV   DIL
Sbjct:   48 SNKPRKVLNPGDFQHFTLKEKNDISHNVTVYRFALPRPTDILGLPIGQHISLAATIG-GKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLEVGQTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMYQIIKAIIRNRPRNGGNDTTQVDLIFANVNPDDIL 215          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_ASHGO (NADH-cytochrome b5 reductase 1 OS=Ashbya gossypii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 72/155 (46.45%), Postives = 106/155 (68.39%), Query Frame = 3
Query:  195 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            ++++EF L+ +  L+HN A + F LP   +VLGLPIGQHIS  G    G+E+++ YTPT+LDSD  G+FEL++K Y +G +S    E+ +GD + V+GPKG + Y+P   +  GM AGG+GI+PM+Q+ RAI    + +T+V L+Y N T  DIL
Sbjct:   41 KDWQEFSLLTKTVLTHNTAIYRFGLPEADAVLGLPIGQHISISGV-IDGKEMLRSYTPTSLDSDATGYFELLVKSYEKGNISKMLAELAIGDRIKVRGPKGFYHYEPNMYKEIGMIAGGTGISPMYQIIRAIFSNPRDKTRVCLVYGNQTKDDIL 194          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_SCHPO (NADH-cytochrome b5 reductase 1 OS=Schizosaccharomyces pombe GN=cbr1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34
Identity = 68/154 (44.16%), Postives = 104/154 (67.53%), Query Frame = 3
Query:  195 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +  ++F+L  +  L+HN A + F LP    VLGLPIGQH+     D  G+E  + YTP + D+D G+F+L++K YP G++S  F E+++GD + V+GPKG ++++ G  R FGM AGG+GITPM Q+ RA+L   +  T++ L+YANV+  DI+
Sbjct:   59 DKIQQFELSDKAVLNHNTAIYRFRLPRANDVLGLPIGQHLKVF-VDVDGKEYSRSYTPLSSDADKGYFDLLVKSYPNGKVSKKFSELKIGDTIGVRGPKGNWKHRTGLARHFGMIAGGTGITPMLQIIRAVLSNFEDPTEITLLYANVSEGDIV 211          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_CANGA (NADH-cytochrome b5 reductase 1 OS=Candida glabrata GN=CBR1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.693e-34
Identity = 74/166 (44.58%), Postives = 109/166 (65.66%), Query Frame = 3
Query:  162 SSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSD-VGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            S K+   +L    F+EF+LV++ QL+HN AK+ F+L   + VLGLPIGQHI+ +     G+ V + YTPT+LD + VG FEL++K YP+G +S H  +M++G+ + + GP+G + Y P   +   M AGG+GITPMFQ+ +AI      +T+V L+Y NV   DIL
Sbjct:   29 SQKEAVKALLKTEFREFELVEKEQLTHNTAKYKFKLADESHVLGLPIGQHITVKTIIG-GKPVSRSYTPTSLDEECVGFFELLVKSYPEGNISKHIGDMKIGEKINISGPRGFYEYVPNVHKHLAMVAGGTGITPMFQIMKAIARDPSDKTRVTLLYGNVLEEDIL 193          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_VANPO (NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.646e-32
Identity = 74/172 (43.02%), Postives = 109/172 (63.37%), Query Frame = 3
Query:  156 LYSSKKPKVSLDPE----NFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +++S++PK    P      + +F LV   +L+ N A + F+LPT   VLGLPIGQHI+ +     G EV++ YTP +LDS+  G+FEL+IK Y QG++S  F  +++GD + V+GPKG + Y     +   M AGGSG+TPM+Q+ ++I E  + +TKV  IY NV   DIL
Sbjct:   24 MFTSEEPKSKALPVLVKGEYMQFPLVSIKKLNRNSAIYRFKLPTDEHVLGLPIGQHITIKAH-IDGSEVVRSYTPISLDSEAKGYFELLIKSYEQGKISKMFTSLKIGDTIDVQGPKGFYEYTDRSSKHLAMIAGGSGLTPMYQIIKSIAENPKDKTKVTFIYGNVEEIDIL 194          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_YEAS7 (NADH-cytochrome b5 reductase 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=CBR1 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.514e-32
Identity = 71/165 (43.03%), Postives = 105/165 (63.64%), Query Frame = 3
Query:  171 KPKVSLDPE--NFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            K K  LDP+  +F+ F LV++  L+HN + + F LP    VLGLPIGQHI  +  +  G+++ + YTPT+LD D  G+FEL++K YP G +S    E+++GD + +KGP+G + Y+       GM AGG+GI PM+Q+ +AI   +   TKV L++ NV   DIL
Sbjct:   28 KTKPVLDPKRNDFQSFPLVEKTILTHNTSMYKFGLPHADDVLGLPIGQHIVIKA-NINGKDITRSYTPTSLDGDTKGNFELLVKSYPTGNVSKMIGELKIGDSIQIKGPRGNYHYERNCRSHLGMIAGGTGIAPMYQIMKAIAMDSHDTTKVSLVFGNVHEEDIL 191          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_YEAST (NADH-cytochrome b5 reductase 1 OS=Saccharomyces cerevisiae GN=CBR1 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 7.699e-32
Identity = 71/165 (43.03%), Postives = 104/165 (63.03%), Query Frame = 3
Query:  171 KPKVSLDPE--NFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            K K  LDP+  +F+ F LV++  L+HN + + F LP    VLGLPIGQHI  +  +  G+++ + YTPT+LD D  G+FEL++K YP G +S    E+++GD + +KGP+G + Y+       GM AGG+GI PM+Q+ +AI       TKV L++ NV   DIL
Sbjct:   28 KTKPVLDPKRNDFQSFPLVEKTILTHNTSMYKFGLPHADDVLGLPIGQHIVIKA-NINGKDITRSYTPTSLDGDTKGNFELLVKSYPTGNVSKMIGELKIGDSIQIKGPRGNYHYERNCRSHLGMIAGGTGIAPMYQIMKAIAMDPHDTTKVSLVFGNVHEEDIL 191          
The following BLAST results are available for this feature:
BLAST of FC932241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
NCB5R_CRYNE1.038e-3644.05NADH-cytochrome b5 reductase 1 OS=Cryptococcus neo... [more]
NCB5R_NEOFI3.021e-3644.05NADH-cytochrome b5 reductase 1 OS=Neosartorya fisc... [more]
NCB5R_AJECN3.945e-3644.51NADH-cytochrome b5 reductase 1 OS=Ajellomyces caps... [more]
NCB5R_ASPNC5.153e-3644.97NADH-cytochrome b5 reductase 1 OS=Aspergillus nige... [more]
NCB5R_ASHGO9.717e-3546.45NADH-cytochrome b5 reductase 1 OS=Ashbya gossypii ... [more]
NCB5R_SCHPO1.269e-3444.16NADH-cytochrome b5 reductase 1 OS=Schizosaccharomy... [more]
NCB5R_CANGA3.693e-3444.58NADH-cytochrome b5 reductase 1 OS=Candida glabrata... [more]
NCB5R_VANPO2.646e-3243.02NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma ... [more]
NCB5R_YEAS74.514e-3243.03NADH-cytochrome b5 reductase 1 OS=Saccharomyces ce... [more]
NCB5R_YEAST7.699e-3243.03NADH-cytochrome b5 reductase 1 OS=Saccharomyces ce... [more]

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Properties
Property NameValue
Genbank descriptionC34206C01EF PostHarveN Citrus clementina cDNA clone C34206C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932241 ID=FC932241; Name=FC932241; organism=Citrus clementina; type=EST; length=658bp
TATATACATATATTGACAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAG
CTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCA
GCTTCTCGTTGGTGGAGCTGTGGCTGTTCTGGCCATTGCTGTTGGTGCTG
CTTACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAAT
TTCAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGC
AAAGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAA
TTGGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTT
ATTAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGA
ATTGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTG
AGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTC
AGGTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTC
TGGCATCACTCCAATGTTCCAAGTTACTAGAGCCATATTAGAGAAAACCC
AATGACAGACAAAGGTGCACCTCATTTATGCCAATGTTACATATGANGAC
ATTCTTTT
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