FC932241

Overview
NameFC932241
Unique NameFC932241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.008e-23
Identity = 69/179 (38.55%), Postives = 103/179 (57.54%), Query Frame = 3
Query:  180 VSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHIS-CRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQG---------RMSHHFREMRVGDYLAVKGPKGRFRYQ-PGQVRAFG---------MTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            V+L P      KL+ +  +S +V KF F LP+   VLGLP+G+HI  C   D +    ++ YTPT+   +VG+FELV+K+Y +G         +MS +   +++G +L VKGP G   YQ  G     G         M AGG+GITP++QV +AIL+  +  T+++++YAN T  DIL
Sbjct:  642 VALIPREKIPCKLIDKQSISPDVRKFRFALPSEDQVLGLPVGKHIFLCAVIDDK--LCMRAYTPTSTIDEVGYFELVVKIYFKGIHPKFPNGGQMSQYLDSLQLGSFLDVKGPLGHIEYQGKGNFLVHGKQKFAKKLAMIAGGTGITPVYQVMQAILKDPEDDTEMYVVYANRTEDDIL 818          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_PICGU (NADH-cytochrome b5 reductase 2 OS=Pichia guilliermondii GN=MCR1 PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.008e-23
Identity = 55/150 (36.67%), Postives = 86/150 (57.33%), Query Frame = 3
Query:  207 EFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            + KL K   +S N   F FEL +P  V GL     +  +   ++G  VI+PYTP +     G  + VIK Y  G+MS HF  ++ GD ++ KGP  +++++P Q ++  +  GG+GITP++Q+   I +  + +TKV L Y N+T  DIL
Sbjct:   49 DLKLKKSWDVSSNTRHFVFELKSPEDVSGLVTASCLMTKFVTAKGNNVIRPYTPVSDVDQKGTIDFVIKKYDGGKMSTHFHGLKEGDTVSFKGPIVKWKWEPNQFQSIALIGGGTGITPLYQLLHEITKNPEDKTKVKLFYGNLTEEDIL 198          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NB5R2_CHICK (NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN=CYB5R2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.316e-23
Identity = 66/187 (35.29%), Postives = 96/187 (51.34%), Query Frame = 3
Query:  171 KPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRY----------------QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +P    DP+      LV + ++SH+  KF F LP+P  VLGLP+GQH+    K   G  VI+ YTP + D   G+ +L+IK+Y +         G+MS +   M++GD +  +GP G   Y                Q    +  G+ AGG+GITPM Q+ R I    +  TK +L++AN T  DIL
Sbjct:   35 RPVTLRDPQAKYPLPLVGKEEISHDTKKFRFGLPSPDHVLGLPVGQHVYLSAK-INGNLVIRAYTPVSSDETKGYVDLIIKVYYKNVNPKFPEGGKMSQYLDSMKIGDVIDFRGPNGLLVYKGSGTFMIKPDKKSEAQRKFAKHLGVIAGGTGITPMLQLIRHITSDPKDSTKCYLLFANQTEKDIL 220          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_SCLS1 (NADH-cytochrome b5 reductase 2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23
Identity = 60/155 (38.71%), Postives = 87/155 (56.13%), Query Frame = 3
Query:  195 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            + F   KL     ++HN  KF FELP    V GL +   +  + K  + ++  I+PYTPT+ + + G  +L++K YP G MS H  EM  G  L  KGP  ++ +   +     + AGG+GITPM+Q+ RAI      +TKV L++ANVT  DIL
Sbjct:   94 QGFISLKLDSVELVNHNTKKFRFELPESDQVSGLHVTSALITKYKGPEMQKPAIRPYTPTSDEGEKGFIDLLVKKYPNGVMSEHMHEMVPGQRLDFKGPIPKYAWSANKHDHIALIAGGTGITPMYQLARAIFNNPADKTKVTLVFANVTEEDIL 248          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_ASPOR (NADH-cytochrome b5 reductase 2 OS=Aspergillus oryzae GN=mcr1 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 3
Query:  195 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            + + + KL +   LSHN  +  FE     +V G+ I   +  + K    E+ V++PYTPT+ +   G+ +LV+K+YP G MS H   M V   L+ KGP  +++++  +     + AGG+GITPM+Q+ R I +    +TKV L+Y NVT  DIL
Sbjct:   72 QGWVDLKLSEIEVLSHNTKRLRFEFEDKEAVSGVTIASALLTKFKPVGAEKAVLRPYTPTSDEDQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLSFKGPLPKYQWETNKHEHIALIAGGTGITPMYQLIRQIFKNPDDKTKVTLVYGNVTEDDIL 226          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_ASPNC (NADH-cytochrome b5 reductase 2 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23
Identity = 55/150 (36.67%), Postives = 86/150 (57.33%), Query Frame = 3
Query:  207 EFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            + KL +   L+HN  +  FE     ++ GL +   +  + K +  + VI+PYTPT+ +   G+ +LV+K+YP G MS H   M VG  L  KGP  ++ ++  +     + AGG+GITPM+Q+ R I +  + QTKV L++ NV   DIL
Sbjct:   76 DLKLSEIEVLNHNTKRLRFEFEDKEALSGLQVASALLTKFKPADAKAVIRPYTPTSDEETPGYIDLVVKVYPNGPMSEHLHSMNVGQRLDFKGPIVKYPWETNKHNHICLIAGGTGITPMYQLAREIFKNPEDQTKVTLVFGNVKEEDIL 225          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.245e-23
Identity = 62/181 (34.25%), Postives = 98/181 (54.14%), Query Frame = 3
Query:  174 PKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMY---------PQGRMSHHFREMRVGDYLAVKGPKGRFRYQ-------PGQVRA----FGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            P V L+P    +  L++R++L+ N   F F LP+P   +GLP+G+H+        GE V++ YTP + D ++G  +++IK+Y           G+MS HF  +R+GD +  KGP G F Y         G++          AGG+GITP + V +A L   + +T++ L++AN T  DIL
Sbjct:  599 PLVVLNPRQKVKLPLIERIELNRNTRIFRFGLPSPQHRIGLPVGKHVFTYA-TINGENVMRAYTPISGDEELGRLDMLIKVYFANEHPAFPDGGKMSQHFESLRIGDTVEFKGPLGHFVYDGRGSYTLNGKLHKHATHMSFVAGGTGITPCYAVIKAALRDPEDKTQISLVFANNTEEDIL 778          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_EMENI (NADH-cytochrome b5 reductase 2 OS=Emericella nidulans GN=mcr1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.245e-23
Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = 3
Query:  165 SKKPKVSLD-PENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +++PKV     + +   KL     LSHN  +  FE P   +V GL I   +  +     G + VI+PYTPT+ +   G+ ELV+K YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+Q+ R I +  + +TKV L++ NV+  DIL
Sbjct:   60 AERPKVFTGGDQGWVNLKLSDIEILSHNTKRLRFEFPDKEAVSGLHIASALLTKYSPPDGSKPVIRPYTPTSDEDQPGYLELVVKRYPNGPMSEHLHNMNVDQRLDFKGPLPKYPWEANKHKHICLVAGGTGITPMYQLAREIFKNPEDKTKVTLVFGNVSEEDIL 225          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_CANAL (NADH-cytochrome b5 reductase 2 OS=Candida albicans GN=MCR1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.245e-23
Identity = 55/160 (34.38%), Postives = 88/160 (55.00%), Query Frame = 3
Query:  177 KVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            K   D   + + KL K + L+HN     F+L     V GL     +  +    +G  VI+PYTP +  +  G  + VIK Y  G+MS H  +++ G+ L+ KGP  +++++P Q ++  +  GG+GITP++Q+   I    +  TKV+LIY N+T  DIL
Sbjct:   45 KTFTDSNEWVDLKLSKSIDLTHNTKHLVFKLKDENDVSGLITASCLLTKFVTPKGNNVIRPYTPVSDVNQSGEIDFVIKKYDGGKMSSHIFDLKEGETLSFKGPIVKWKWEPNQFKSIALIGGGTGITPLYQLLHQITSNPKDNTKVNLIYGNLTPEDIL 204          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_DEBHA (NADH-cytochrome b5 reductase 2 OS=Debaryomyces hansenii GN=MCR1 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.933e-23
Identity = 55/150 (36.67%), Postives = 83/150 (55.33%), Query Frame = 3
Query:  207 EFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            + KL K    +HN   F FEL     V GL     +  +    +G  VI+PYTP +     G  E VIK Y  G+MS H  +++  D LA KGP  +++++P Q ++  +  GG+GITP++Q+   I +  + +TKV+L Y N+T  DIL
Sbjct:   54 DLKLAKSWDTTHNTKHFVFELANQDDVSGLINASCLLTKFVTPKGNNVIRPYTPISDVDGKGSIEFVIKKYDGGKMSSHIHDLKPNDTLAFKGPVVKWKWEPNQYKSIALIGGGTGITPLYQLMHEITKNPEDKTKVNLFYGNLTEKDIL 203          
The following BLAST results are available for this feature:
BLAST of FC932241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
NIA1_TOBAC1.008e-2338.55Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
MCR1_PICGU1.008e-2336.67NADH-cytochrome b5 reductase 2 OS=Pichia guillierm... [more]
NB5R2_CHICK1.316e-2335.29NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN... [more]
MCR1_SCLS11.719e-2338.71NADH-cytochrome b5 reductase 2 OS=Sclerotinia scle... [more]
MCR1_ASPOR1.719e-2336.77NADH-cytochrome b5 reductase 2 OS=Aspergillus oryz... [more]
MCR1_ASPNC1.719e-2336.67NADH-cytochrome b5 reductase 2 OS=Aspergillus nige... [more]
NIA_VOLCA2.245e-2334.25Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
MCR1_EMENI2.245e-2336.75NADH-cytochrome b5 reductase 2 OS=Emericella nidul... [more]
MCR1_CANAL2.245e-2334.38NADH-cytochrome b5 reductase 2 OS=Candida albicans... [more]
MCR1_DEBHA2.933e-2336.67NADH-cytochrome b5 reductase 2 OS=Debaryomyces han... [more]

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Properties
Property NameValue
Genbank descriptionC34206C01EF PostHarveN Citrus clementina cDNA clone C34206C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932241 ID=FC932241; Name=FC932241; organism=Citrus clementina; type=EST; length=658bp
TATATACATATATTGACAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAG
CTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCA
GCTTCTCGTTGGTGGAGCTGTGGCTGTTCTGGCCATTGCTGTTGGTGCTG
CTTACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAAT
TTCAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGC
AAAGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAA
TTGGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTT
ATTAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGA
ATTGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTG
AGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTC
AGGTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTC
TGGCATCACTCCAATGTTCCAAGTTACTAGAGCCATATTAGAGAAAACCC
AATGACAGACAAAGGTGCACCTCATTTATGCCAATGTTACATATGANGAC
ATTCTTTT
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