FC932241

Overview
NameFC932241
Unique NameFC932241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: YMI7_YEAST (Uncharacterized oxidoreductase YML087C OS=Saccharomyces cerevisiae GN=YML087C PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.830e-23
Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 3
Query:  216 LVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            L K+ ++S N + + F+L  P   L +P+G H++ R     GE +++ YTP  + +  GH ELV+K Y  G +S +F ++++  Y+  KGP G   Y        G+ AGGSGITP+ QV + I+   +  T + LIYAN T  DIL
Sbjct:   77 LSKKTRISRNTSLYCFKLKYPFERLHIPMGYHLAVR-VTINGERLVRYYTPVNVPNTEGHLELVVKTYKHGVVSKYFDKLKIRQYVEFKGPLGELEYDQDTATELGIIAGGSGITPVLQVLQEIIPSPEDLTHISLIYANETEDDIL 222          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA_CUCMA (Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.830e-23
Identity = 69/181 (38.12%), Postives = 100/181 (55.25%), Query Frame = 3
Query:  177 KVSLDPENFKEFKLVKRLQLSHNVAKFTFELPT-PTSVLGLPIGQHIS-CRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGR---------MSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +V+L P      KL+ +  +SH+V  F F LP      LGLP+G+HI  C   D  G+  ++ YTPT+   ++G FELV+K+Y +G          MS +   M VG  L VKGP G   Y          +P   R   M AGG+GITP++QV +AIL+  + +T+++++YAN T  DIL
Sbjct:  655 RVALAPNEKIPCKLISKTSISHDVRVFRFALPGGQDQALGLPVGKHIFICATVD--GKLCMRAYTPTSSIDEMGFFELVVKVYFKGVHPKFPNGGIMSQYLDSMEVGSTLDVKGPLGHIEYTGRGNFMVHGKPRFARRLAMLAGGTGITPIYQVVQAILKDPEDETEMYVVYANRTEDDIL 833          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.830e-23
Identity = 65/170 (38.24%), Postives = 101/170 (59.41%), Query Frame = 3
Query:  213 KLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHI-SCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVG-DYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAIL-EKTQ*QTKVHLIYANVTYXDIL 656
            +LV + +LSH+V  F F LP+   VLGLP+G+HI  C   D  G+  ++ YTPT++  ++G FEL++K+Y +         G M+ +   ++VG  Y+ VKGP G   Y          +  + R   M  GGSGITPM+QV +A+L ++ + +T++HL+YAN +  DIL
Sbjct:  660 RLVDKKELSHDVRLFRFALPSSDQVLGLPVGKHIFVCATID--GKLCMRAYTPTSMVDEIGQFELLVKVYFRDEHPKFPNGGLMTQYLESLQVGSSYIDVKGPLGHVEYTGRGNFVINGKQRRARRLAMICGGSGITPMYQVIQAVLRDQPEDETEMHLVYANRSEDDIL 827          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_AJECN (NADH-cytochrome b5 reductase 2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=MCR1 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.002e-23
Identity = 60/152 (39.47%), Postives = 88/152 (57.89%), Query Frame = 3
Query:  213 KLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLD---SDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            KL     ++HNV K  FE   P SV GL I   +  + K    E+  I+PYTP + +   + +G+ +L++K YP G MS+H   M VG  L  KGP  ++ ++P +     + AGG+GITPM+Q+ R I    + +TKV L++ANVT  DIL
Sbjct:   76 KLAHIDNVNHNVKKLRFEFEDPESVSGLHIASALLTKYKGLTDEKPTIRPYTPVSDEGMWASLGYLDLLVKRYPNGPMSNHLHNMAVGQRLDFKGPLPKYPWEPSKHDHICLIAGGTGITPMYQLVRKIFSNPEDKTKVTLVFANVTEEDIL 227          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_PHANO (NADH-cytochrome b5 reductase 2 OS=Phaeosphaeria nodorum GN=MCR1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23
Identity = 60/166 (36.14%), Postives = 91/166 (54.82%), Query Frame = 3
Query:  162 SSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +SKK     D + F    L K   ++HN  K TF+LP P    GLP+   +  + K  + E+ VI+PYTP +     G  + ++K Y +G MS H   M  G  L +KGP  ++ + P +     + AGG+GITPM+Q  RAI +  + +TKV L++ N++  DIL
Sbjct:   74 ASKKAFTGGD-QGFISLLLDKSEVVNHNTKKLTFKLPEPDMESGLPVTSAVITKYKGPEMEKPVIRPYTPVSDVDQQGTVDFIVKKYEKGPMSSHMHNMEPGQRLDIKGPIPKYPWSPNKHEHIALIAGGTGITPMWQTARAIFKNPEDKTKVTLVFGNISEEDIL 238          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_ASPFU (NADH-cytochrome b5 reductase 2 OS=Aspergillus fumigatus GN=mcr1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.533e-23
Identity = 59/166 (35.54%), Postives = 93/166 (56.02%), Query Frame = 3
Query:  165 SKKPKVSLD-PENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +++PKV     + + + KL +   LS N  +  FE P   +V GL +   +  + K    E+ VI+PYTP + +   G+ +LV+K+YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+Q+ R I +  + QTKV L++ NV   DIL
Sbjct:   61 AERPKVFTGGDQGWVDLKLAQIENLSPNTKRLRFEFPDKEAVSGLHVASALLTKFKPQGAEKPVIRPYTPVSDEEQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPIPKYPWEANKHKHICLIAGGTGITPMYQLARKIFKDPEDQTKVTLVFGNVREEDIL 226          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_NEOFI (NADH-cytochrome b5 reductase 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.114e-22
Identity = 59/166 (35.54%), Postives = 93/166 (56.02%), Query Frame = 3
Query:  165 SKKPKVSLD-PENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +++PKV     + + + KL +   LS N  +  FE P   +V GL +   +  + K    E+ VI+PYTP + +   G+ +LV+K+YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+Q+ R I +  + QTKV L++ NV   DIL
Sbjct:   61 AERPKVFTGGDQGWVDLKLAQIENLSPNTKRLRFEFPDKEAVSGLHVASALLTKFKPHGAEKPVIRPYTPVSDEEQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPIPKYPWEANKHKHICLIAGGTGITPMYQLARKIFKDPEDQTKVTLVFGNVREEDIL 226          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.901e-22
Identity = 63/180 (35.00%), Postives = 99/180 (55.00%), Query Frame = 3
Query:  177 KVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHIS-CRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGR---------MSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +V+L+P      KL+ +  +SH+V    F LP    V+GLP+G H+  C   D +    ++ YTPT+   +VG F+LV+K+Y +G          MS H   + +G  + VKGP G   Y          +P   +   M AGG+GITP++QV +AIL+  + +T+++++YAN T  DIL
Sbjct:  619 EVALNPREKIPCKLLSKTSISHDVRLLRFALPAEDQVMGLPVGNHVFLCATVDEK--LCMRAYTPTSSVDEVGFFDLVVKVYFKGVHPNFPNGGIMSQHLDSLPIGSVVDVKGPLGHIEYTGRGNFLVHGKPRFAKRLTMLAGGTGITPIYQVVQAILKDPEDRTEMYVVYANRTEDDIL 796          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 2.483e-22
Identity = 57/176 (32.39%), Postives = 97/176 (55.11%), Query Frame = 3
Query:  186 LDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRYQ----------PGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            ++P      +L+++  +SH+V KF F LP+    LGLP+G+H+      +  +  ++ YTPT+    VGH +LV+K+Y +         G MS H   + +G  + +KGP G   Y+          P   +   M AGG+GITP++Q+ ++IL   + +T+++++YAN T  DIL
Sbjct:  657 VNPREKIPVRLIEKTSISHDVRKFRFALPSEDQQLGLPVGKHVFVCANIND-KLCLRAYTPTSAIDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHLDSLPIGSMIDIKGPLGHIEYKGKGNFLVSGKPKFAKKLAMLAGGTGITPIYQIIQSILSDPEDETEMYVVYANRTEDDIL 831          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA_PICAN (Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.242e-22
Identity = 63/179 (35.20%), Postives = 97/179 (54.19%), Query Frame = 3
Query:  171 KPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGR-------MSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            K +V LDP  + +  L ++  +S +   F F+L     + GLP G+H+  R KDS G+ V++ YTP + +S  G  E++IK+Y   R       M++    ++VG+ + VKGP G F Y          +P Q++ F M +GGSGITP +QV +AI    + +T V L + N    DIL
Sbjct:  594 KREVLLDPRKWHKITLAEKEVISSDSRIFKFDLEHSEQLSGLPTGKHLFLRLKDSSGKYVMRAYTPKSSNSLRGRLEILIKVYFPNREYPNGGIMTNLIENLQVGNQIEVKGPVGEFEYVKCGHCSFNNKPYQMKHFVMISGGSGITPTYQVLQAIFSDPEDRTSVQLFFGNKKVDDIL 772          
The following BLAST results are available for this feature:
BLAST of FC932241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
YMI7_YEAST3.830e-2337.41Uncharacterized oxidoreductase YML087C OS=Saccharo... [more]
NIA_CUCMA3.830e-2338.12Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 ... [more]
NIA1_HORVU3.830e-2338.24Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
MCR1_AJECN5.002e-2339.47NADH-cytochrome b5 reductase 2 OS=Ajellomyces caps... [more]
MCR1_PHANO6.533e-2336.14NADH-cytochrome b5 reductase 2 OS=Phaeosphaeria no... [more]
MCR1_ASPFU8.533e-2335.54NADH-cytochrome b5 reductase 2 OS=Aspergillus fumi... [more]
MCR1_NEOFI1.114e-2235.54NADH-cytochrome b5 reductase 2 OS=Neosartorya fisc... [more]
NIA1_PHAVU1.901e-2235.00Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NIA1_ARATH2.483e-2232.39Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
NIA_PICAN3.242e-2235.20Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR... [more]

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Properties
Property NameValue
Genbank descriptionC34206C01EF PostHarveN Citrus clementina cDNA clone C34206C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932241 ID=FC932241; Name=FC932241; organism=Citrus clementina; type=EST; length=658bp
TATATACATATATTGACAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAG
CTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCA
GCTTCTCGTTGGTGGAGCTGTGGCTGTTCTGGCCATTGCTGTTGGTGCTG
CTTACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAAT
TTCAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGC
AAAGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAA
TTGGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTT
ATTAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGA
ATTGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTG
AGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTC
AGGTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTC
TGGCATCACTCCAATGTTCCAAGTTACTAGAGCCATATTAGAGAAAACCC
AATGACAGACAAAGGTGCACCTCATTTATGCCAATGTTACATATGANGAC
ATTCTTTT
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