FC932250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932250 vs. ExPASy Swiss-Prot
Match: QCR1_BOVIN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32 Identity = 65/138 (47.10%), Postives = 96/138 (69.57%), Query Frame = 2 Query: 257 PKFLKYGSPHPTLTSHTHILAAPETKIATLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVKYALDILADILQNSTFDQAR 670 P L+ T T + + PET+++ L NGLRVA+E + + T TVGVWIDAGSR+E+++ NG +F+EH+ FKGT+ R LE+E+E+MG HLNAY++RE T YY K L KD+ A+++LADI+QN + + ++ Sbjct: 24 PALLRSSDLRGTATYAQALQSVPETQVSQLDNGLRVASEQS-SQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQ 160
BLAST of FC932250 vs. ExPASy Swiss-Prot
Match: QCR1_HUMAN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens GN=UQCRC1 PE=1 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32 Identity = 66/138 (47.83%), Postives = 94/138 (68.12%), Query Frame = 2 Query: 257 PKFLKYGSPHPTLTSHTHILAAPETKIATLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVKYALDILADILQNSTFDQAR 670 P L+ + T T + PET+++ L NGLRVA+E + + T TVGVWID GSRFET++ NG +FLEH+ FKGT+ R LE+E+E+MG HLNAY++RE T YY K L KD+ A+++L DI+QN + + ++ Sbjct: 24 PALLRTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQS-SQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQ 160
BLAST of FC932250 vs. ExPASy Swiss-Prot
Match: QCR1_MOUSE (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.039e-31 Identity = 66/138 (47.83%), Postives = 96/138 (69.57%), Query Frame = 2 Query: 257 PKFLKYGSPHPTLTSHTHILAAPETKIATLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVKYALDILADILQNSTFDQAR 670 P L+ + T T + + PET+++ L NGLRVA+E + A T TVGVWIDAGSR+ET++ NG +FLEH+ FKGT+ R LE+E+E++G HLNAY++RE T Y K L KD+ +++LADI+QNS+ + ++ Sbjct: 24 PALLRLPALRGTATFAQALQSVPETQVSILDNGLRVASEQSSHA-TCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQ 160
BLAST of FC932250 vs. ExPASy Swiss-Prot
Match: QCR1_EUGGR (Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31 Identity = 71/112 (63.39%), Postives = 81/112 (72.32%), Query Frame = 2 Query: 317 AAPETKIATLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVKYALDILADILQNS 652 AA T LPNG R+A+ES T TVGVWIDAGSR+ET++ NG AHFLEHM FKGT KR+ +D+E +E MG HLNAYTSRE T YY K KDV A+DILADIL NS Sbjct: 23 AARPTLQNALPNGFRIASESK-DGDTCTVGVWIDAGSRWETEKNNGVAHFLEHMNFKGTGKRSRQDIEFGMEKMGAHLNAYTSREHTCYYVKCFKKDVPEAVDILADILLNS 133
BLAST of FC932250 vs. ExPASy Swiss-Prot
Match: MPPB_YEAST (Mitochondrial-processing peptidase subunit beta OS=Saccharomyces cerevisiae GN=MAS1 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.024e-31 Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = 2 Query: 323 PETKIATLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVKYALDILADILQNSTFDQA 667 P T+ + LPNGL +ATE +ATVG+++DAGSR E + NGTAHFLEH+ FKGT+ R+ + +E EIEN+G HLNAYTSRE T YYAK L +D+ A+DIL+DIL S D + Sbjct: 24 PGTRTSKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGTQNRSQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVLDNS 138
BLAST of FC932250 vs. ExPASy Swiss-Prot
Match: QCR1_RAT (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.560e-30 Identity = 63/138 (45.65%), Postives = 94/138 (68.12%), Query Frame = 2 Query: 257 PKFLKYGSPHPTLTSHTHILAAPETKIATLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVKYALDILADILQNSTFDQAR 670 P L+ + T T + + PET+++ L NGLRVA+E + + T TVGVWID GSR+ET++ NG +FLEH+ FKGT+ R LE+E+E++G HLNAY++RE T Y K L KD+ +++LADI+QN + + ++ Sbjct: 24 PALLRLPALRGTATFVQALQSVPETQVSVLDNGLRVASEQS-SHPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNISLEDSQ 160
BLAST of FC932250 vs. ExPASy Swiss-Prot
Match: MPPB_SCHPO (Probable mitochondrial-processing peptidase subunit beta OS=Schizosaccharomyces pombe GN=qcr1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.270e-29 Identity = 69/123 (56.10%), Postives = 82/123 (66.67%), Query Frame = 2 Query: 287 PTLTSHTHILAAPETKIATLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVKYALDILADILQNST 655 P L A P+T+ TL NGL VATE + A+TATV V +DAGSR ET + NG AHFLEH+ FKGT+ R+ + LE E EN G HLNAYTSREQT YYA V A+ +LADIL NS+ Sbjct: 8 PKLVRRFATTALPKTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKNRSQKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSS 130
BLAST of FC932250 vs. ExPASy Swiss-Prot
Match: YMXG_BACSU (Uncharacterized zinc protease ymxG OS=Bacillus subtilis GN=ymxG PE=3 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 341 TLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVKYALDILADILQNSTFDQ 664 T NG+R+ E+N ++ +GVWI GSR ET E NG +HFLEHM FKGT ++AR++ E + +GG +NA+TS+E T YYAKVLD+ YALD+LAD+ +STFD+ Sbjct: 6 TCQNGVRIVLENNPTVRSVAIGVWIGTGSRHETPEINGISHFLEHMFFKGTSTKSAREIAESFDRIGGQVNAFTSKEYTCYYAKVLDEHANYALDVLADMFFHSTFDE 113
BLAST of FC932250 vs. ExPASy Swiss-Prot
Match: UCR1_CAEEL (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis elegans GN=ucr-1 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.007e-26 Identity = 58/117 (49.57%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 311 ILAAPETKIATLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVKYALDILADILQNSTFD 661 + +AP+ ++ TL NG RV TE N +A TATVGVWI+ GSRFE ++ NG AHFLE +I KGT KR + LE E+ +G LN++T R+QT + + +DV+ +DILAD+L+NS + Sbjct: 32 LASAPQAEVTTLKNGFRVVTEDNGSA-TATVGVWIETGSRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGAKLNSFTERDQTAVFVQAGAQDVEKVVDILADVLRNSKLE 147
BLAST of FC932250 vs. ExPASy Swiss-Prot
Match: Y5738_STRCO (Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor GN=SCO5738 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.113e-25 Identity = 51/108 (47.22%), Postives = 75/108 (69.44%), Query Frame = 2 Query: 341 TLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVKYALDILADILQNSTFDQ 664 TLP GLR+ TE+ + ++AT G+W GSR ET NG H+LEH++FKGT KR+A D+ I+ +GG +NA+T++E T YYA+VLD D+ A+D++ D+L S + Sbjct: 39 TLPGGLRIVTETLPSVRSATFGIWAHVGSRDETPALNGATHYLEHLLFKGTRKRSALDISSAIDAVGGEMNAFTAKEYTCYYARVLDTDLPLAIDVVCDMLTGSLIQE 146 The following BLAST results are available for this feature:
BLAST of FC932250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932250 ID=FC932250; Name=FC932250; organism=Citrus clementina; type=EST; length=672bpback to top |