FC932253

Overview
NameFC932253
Unique NameFC932253
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_ASPCL (Small COPII coat GTPase sar1 OS=Aspergillus clavatus GN=sar1 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.185e-45
Identity = 97/178 (54.49%), Postives = 116/178 (65.17%), Query Frame = 1 
Query:   85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618
            M++++WFY VLASLGL  K AK+LFLGLDNAGK TLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+EL + LGL   TTGKGKV L    +RP+EVFMCS+V +
Sbjct:    1 MWIINWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMR 175
[Close]
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_ASPOR (Small COPII coat GTPase sar1 OS=Aspergillus oryzae GN=sar1 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.200e-44
Identity = 97/178 (54.49%), Postives = 116/178 (65.17%), Query Frame = 1 
Query:   85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618
            M++++WFY VLASLGL  K AK+LFLGLDNAGK TLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+EL + LGL   TTGKGKV L    +RP+EVFMCS+V +
Sbjct:    1 MWIINWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMR 175
[Close]
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_ASPFU (Small COPII coat GTPase sar1 OS=Aspergillus fumigatus GN=sar1 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.200e-44
Identity = 96/178 (53.93%), Postives = 116/178 (65.17%), Query Frame = 1 
Query:   85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618
            M++++WFY +LASLGL  K AK+LFLGLDNAGK TLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+EL + LGL   TTGKGKV L    +RP+EVFMCS+V +
Sbjct:    1 MWIINWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMR 175
[Close]
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_ASPTN (Small COPII coat GTPase sar1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sar1 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.046e-44
Identity = 96/178 (53.93%), Postives = 116/178 (65.17%), Query Frame = 1 
Query:   85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618
            M++++WFY +LASLGL  K AK+LFLGLDNAGK TLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+EL + LGL   TTGKGKV L    +RP+EVFMCS+V +
Sbjct:    1 MWIINWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDYERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMR 175
[Close]
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.046e-44
Identity = 97/178 (54.49%), Postives = 116/178 (65.17%), Query Frame = 1 
Query:   85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618
            M+L++WFY +LASLGL  K AK+LFLGLDNAGK TLLHMLK++R+   QPT +PTSEEL+IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFL+LGNKID P A SE+EL + LGL   TTGKGKV L    +RP+EVFMCS+V +
Sbjct:    1 MWLINWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMR 175
[Close]
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_CHAGB (Small COPII coat GTPase SAR1 OS=Chaetomium globosum GN=SAR1 PE=3 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 2.673e-44
Identity = 95/178 (53.37%), Postives = 117/178 (65.73%), Query Frame = 1 
Query:   85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618
            M++++WFY VL+SLGL  K AK+LFLGLDNAGK TLLHMLK++R+   QPT +PTSEELSIG ++F  FDLGGHQ ARR+W                   ERF E+K              VPF+VLGNKID P A SE+EL + LG+   TTGKGKV L    +RP+EVFMCS+V +
Sbjct:    1 MWIINWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSIGNVRFTTFDLGGHQQARRLWKDYFPEVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVVLGNKIDHPDAVSEDELRHQLGMYQ-TTGKGKVPL--EGIRPIEVFMCSVVMR 175
[Close]
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.559e-44
Identity = 94/178 (52.81%), Postives = 117/178 (65.73%), Query Frame = 1 
Query:   85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618
            M++++WFY VL+SLGL  K AK+LFLGLDNAGK TLLHMLK++R+   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   +RF E+K              VPF++LGNKID P A SEEEL + LGL   TTGKGKV L    +RP+EVFMCS+V +
Sbjct:    1 MWIINWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMR 175
[Close]
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_TRIRE (Small COPII coat GTPase sar1 OS=Trichoderma reesei GN=sar1 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.776e-44
Identity = 92/178 (51.69%), Postives = 117/178 (65.73%), Query Frame = 1 
Query:   85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618
            M++++WFY VL+SLGL  K AK+LFLGLDNAGK TLLHMLK++R+   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERF E+K              VPF++LGNKID P A SE+EL + LGL   TTGKG+V L    +RP+E+FMCS+V +
Sbjct:    1 MWIVNWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFNTFDLGGHQQARRIWRDYFPDVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGRVQL--EGIRPIELFMCSVVMR 175
[Close]
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_EMENI (Small COPII coat GTPase sar1 OS=Emericella nidulans GN=sar1 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.326e-43
Identity = 96/178 (53.93%), Postives = 114/178 (64.04%), Query Frame = 1 
Query:   85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618
            M++++WFY +LASLGL  K AK+LFLGLDNAGK TLLHMLK++R+    PT +PTSEEL IG  +F  FDLGGHQ ARR+W                   ERF ESK              VPFLVLGNKID P A SE+EL + LGL   TTGKGKV L    +RP+EVFMCS+V +
Sbjct:    1 MWIINWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILSPTAHPTSEELVIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLVLGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMR 175
[Close]
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_PICST (Small COPII coat GTPase SAR1 OS=Pichia stipitis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.732e-43
Identity = 95/178 (53.37%), Postives = 114/178 (64.04%), Query Frame = 1 
Query:   85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618
            M+L DWF  VL+SLGLW K AK+LFLGLDNAGK TLLHMLK++RL   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+W                   ERFAESK             +VPFL+LGNKID+P A  E EL   LGL N TTGK    L + + RP+EV+M S+V +
Sbjct:    1 MWLFDWFQDVLSSLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELSHVPFLILGNKIDVPTAVGEMELKSALGLYN-TTGKDTGKLPEGS-RPIEVYMVSVVMR 176
The following BLAST results are available for this feature:
BLAST of FC932253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
SAR1_ASPCL9.185e-4554.49Small COPII coat GTPase sar1 OS=Aspergillus clavat... [more]
SAR1_ASPOR1.200e-4454.49Small COPII coat GTPase sar1 OS=Aspergillus oryzae... [more]
SAR1_ASPFU1.200e-4453.93Small COPII coat GTPase sar1 OS=Aspergillus fumiga... [more]
SAR1_ASPTN2.046e-4453.93Small COPII coat GTPase sar1 OS=Aspergillus terreu... [more]
SAR1_ASPNC2.046e-4454.49Small COPII coat GTPase SAR1 OS=Aspergillus niger ... [more]
SAR1_CHAGB2.673e-4453.37Small COPII coat GTPase SAR1 OS=Chaetomium globosu... [more]
SAR1_MAGGR4.559e-4452.81Small COPII coat GTPase SAR1 OS=Magnaporthe grisea... [more]
SAR1_TRIRE7.776e-4451.69Small COPII coat GTPase sar1 OS=Trichoderma reesei... [more]
SAR1_EMENI1.326e-4353.93Small COPII coat GTPase sar1 OS=Emericella nidulan... [more]
SAR1_PICST1.732e-4353.37Small COPII coat GTPase SAR1 OS=Pichia stipitis GN... [more]

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Properties
Property NameValue
Genbank descriptionC34206D05EF PostHarveN Citrus clementina cDNA clone C34206D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932253 ID=FC932253; Name=FC932253; organism=Citrus clementina; type=EST; length=620bp
ACGATCTGATTCGTTCTCAGCCTTAGATCGTCGTAAATTCAAGCTCGATC
CGTTTTCGTTTCTAATTTGTCTACCGATAAAGCCATGTTTCTCCTCGACT
GGTTCTACGGCGTGCTGGCCTCCCTCGGTCTTTGGCAGAAAGAGGCCAAG
ATCTTGTTTTTAGGGCTTGATAATGCTGGAAAAGCAACGTTGCTTCACAT
GTTGAAAGATGAGAGATTGGTTCAACATCAGCCAACACAGTATCCCACAT
CGGAAGAGCTTAGTATTGGGAAAATTAAGTTCAAGGCGTTTGATTTGGGA
GGCCATCAGATTGCTAGGAGAGTCTGGAAGGATTACTATGCGAAGGTTGA
TGCTGTGGTATACCTAGTGGATGCCTATGACAAAGAGAGGTTTGCAGAAT
CAAAGAAAGAACTGGATGCACTCCTTTCTGATGAGGCATTGGCCAATGTT
CCTTTTCTTGTGTTAGGAAACAAGATTGACATCCCTTATGCTGCTTCTGA
GGAAGAGTTGTGTTACCACCTTGGCCTATCAAATTTCACCACTGGGAAGG
GGAAGGTTAATCTAGCGGACTCAAATGTCCGTCCACTGGAGGTGTTTATG
TGTAGCATAGTTCGCAAAAT
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