FC932253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.262e-43 Identity = 96/178 (53.93%), Postives = 117/178 (65.73%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 MFL DWF+ VL+ LGL+ K AKILFLGLDNAGK TLL +LKD RL + PT +PTSEEL++G I+FKAFDLGGH+ ARR+W +RF ESKK NVPFL+LGNK+DI SEE+ LGL+ TTGKGK L + VRP+EVFMCS+V++ Sbjct: 1 MFLFDWFWNVLSFLGLYNKNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDIG-NTSEEKFRASLGLTQ-TTGKGKTTL--NGVRPIEVFMCSVVKR 174
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_LODEL (Small COPII coat GTPase SAR1 OS=Lodderomyces elongisporus GN=SAR1 PE=3 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 2.955e-43 Identity = 94/178 (52.81%), Postives = 112/178 (62.92%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 M++ DWF +LASLGLW K AK+LFLGLDNAGK TLLHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ERFAESK VPF++LGNKID+P A E EL LGL N TTGK L + RP+EVFM S+V + Sbjct: 1 MWIFDWFQDILASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADSERFAESKAELESLFKIEELSQVPFVILGNKIDVPTAVGEMELKNALGLYN-TTGKDTGKLPEGQ-RPIEVFMVSVVMR 176
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 6.583e-43 Identity = 97/175 (55.43%), Postives = 110/175 (62.86%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSI 609 M++L+WF VLASLGLW K AK+LFLGLDNAGK TLLHMLK++RL QPT +PTSEELSIG ++F FDLGGH+ ARRVW ERF ES+ VP LVLGNKID A SE EL + LGL TTGK KV L + RPLEVF CSI Sbjct: 1 MWVLNWFQDVLASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMT-TTGKDKVQLVEGQ-RPLEVFTCSI 173
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_CANAL (Small COPII coat GTPase SAR1 OS=Candida albicans GN=SAR1 PE=3 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 6.583e-43 Identity = 93/178 (52.25%), Postives = 112/178 (62.92%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 M++ DWF +L+SLGLW K AK+LFLGLDNAGK TLLHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ERFAESK VPF++LGNKID+P A E EL LGL N TTGK L + RP+EVFM S+V + Sbjct: 1 MWIFDWFQDILSSLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERFAESKAELESLFRIEELSQVPFVILGNKIDVPTAVGEMELKNALGLYN-TTGKDTGKLPE-GTRPIEVFMVSVVMR 176
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNG (Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 8.597e-43 Identity = 94/178 (52.81%), Postives = 115/178 (64.61%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 M+L++WFY +LASLGL K AK+LFLGLDNAGK TLLHMLK++R+ QPT +PTSEEL+IG +F FDLGGHQ ARR+W E F ESK VPFL+LGNKID P A SE+++ + LGL TTGKGKV L +RP+EVFMCS+V + Sbjct: 1 MWLINWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMR 175
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.123e-42 Identity = 96/178 (53.93%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 M+L DWF VLASLGLW K AK+LFLGLDNAGK TLLHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ERFAESK +VPFL+LGNKID A E EL LGL N TTGK L + RP+EVFM S+V + Sbjct: 1 MWLFDWFQDVLASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILGNKIDASSAVGEMELKSALGLYN-TTGKDTGKLPEGQ-RPIEVFMVSVVMR 176
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.466e-42 Identity = 93/181 (51.38%), Postives = 110/181 (60.77%), Query Frame = 1 Query: 88 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 F+ DW Y VL LGL++K K++FLGLDNAGK TLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE L GL TTGKG V+L + N RPLEVFMCS++++ Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKR 183
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.915e-42 Identity = 94/176 (53.41%), Postives = 112/176 (63.64%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIV 612 MF+++WFY LA LGL K AK+LFLGLDNAGK TLLHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ER +ESK VPFL+LGNKID P A SE+EL LGL TTGKG V+ +RP+EVFMCS+V Sbjct: 1 MFIINWFYDALAMLGLVNKHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQ-TTGKG-VSKPVPGIRPIEVFMCSVV 174
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.915e-42 Identity = 93/181 (51.38%), Postives = 110/181 (60.77%), Query Frame = 1 Query: 88 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 F+ DW Y VL LGL++K K++FLGLDNAGK TLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE L GL TTGKG V+L + N RPLEVFMCS++++ Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKR 183
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.915e-42 Identity = 93/181 (51.38%), Postives = 110/181 (60.77%), Query Frame = 1 Query: 88 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 F+ DW Y VL LGL++K K++FLGLDNAGK TLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE L GL TTGKG V+L + N RPLEVFMCS++++ Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKR 183 The following BLAST results are available for this feature:
BLAST of FC932253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932253 ID=FC932253; Name=FC932253; organism=Citrus clementina; type=EST; length=620bpback to top |