FC932255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_AGRT5 (Fumarate hydratase class II OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=fumC PE=3 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 9.174e-41 Identity = 86/126 (68.25%), Postives = 101/126 (80.16%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEY-GLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RSL NF IG E++ P +VRA GI+K+ AA+ NM GLDP +G AI+ AAQEV +GKL +HFPLVVWQTGSGTQSNMNANEVI+NRA E+LG + G +K VHPNDHVN SQSSNDT+PT MHIA Sbjct: 28 RSLGNFKIGWEKQ--PASVVRALGIVKQAAARANMALAGLDPKVGDAIIAAAQEVIDGKLTEHFPLVVWQTGSGTQSNMNANEVISNRAIEMLGGEMGTKKPVHPNDHVNMSQSSNDTYPTAMHIA 151
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_BORPA (Fumarate hydratase class II OS=Bordetella parapertussis GN=fumC PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.465e-38 Identity = 85/128 (66.41%), Postives = 96/128 (75.00%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAA 378 RSL F I E+MP P+V A LK+ AAKVN E G LDP + AIM+AA EV GK D FPL VWQTGSGTQSNMN NEV+ANRA+E+LG +RGE + VHPNDHVNR QSSNDTFPT MH+AAA Sbjct: 27 RSLHFFAIS--TEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVVAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAA 152
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_BORBR (Fumarate hydratase class II OS=Bordetella bronchiseptica GN=fumC PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.465e-38 Identity = 85/128 (66.41%), Postives = 96/128 (75.00%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAA 378 RSL F I E+MP P+V A LK+ AAKVN E G LDP + AIM+AA EV GK D FPL VWQTGSGTQSNMN NEV+ANRA+E+LG +RGE + VHPNDHVNR QSSNDTFPT MH+AAA Sbjct: 27 RSLHFFAIS--TEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVVAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAA 152
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_METEA (Fumarate hydratase class II OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=fumC PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.913e-38 Identity = 86/128 (67.19%), Postives = 96/128 (75.00%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAA 378 RS+QNF IG ER+ P P+V A GI+K+ AA VN + G LDP I AI ++A EV GK +D FPLVVWQTGSGTQSNMNANEVIA+ A E LG KRG K VHPNDH NR QSSNDTFPT MHIA A Sbjct: 35 RSIQNFKIGTERQ--PAPLVHALGIVKQAAALVNKDLGGLDPKIADAIAESAAEVVAGKHDDEFPLVVWQTGSGTQSNMNANEVIASLANERLGGKRGGKSPVHPNDHCNRGQSSNDTFPTAMHIAVA 160
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_BORPE (Fumarate hydratase class II OS=Bordetella pertussis GN=fumC PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.913e-38 Identity = 85/128 (66.41%), Postives = 96/128 (75.00%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAA 378 RSL F I E+MP P+V A LK+ AAKVN E G LDP + AIM+AA EV GK D FPL VWQTGSGTQSNMN NEV+ANRA+E+LG +RGE + VHPNDHVNR QSSNDTFPT MH+AAA Sbjct: 27 RSLHFFAIS--TEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAA 152
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC2_PSEAE (Fumarate hydratase class II 2 OS=Pseudomonas aeruginosa GN=fumC2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.115e-37 Identity = 80/128 (62.50%), Postives = 97/128 (75.78%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAA 378 RSL+NF IGG+R MP ++ A ++KK AA+VN G L P + + I QAA EV G+ ++HFPLVVWQTGSGTQ+NMN NEVIA RA E+ G+ RG K VHPNDHVNR+QSSND+FPT MHIAAA Sbjct: 26 RSLENFAIGGQR--MPLAVIHALALIKKAAARVNDHLGELPPEVARLIEQAADEVLAGRHDEHFPLVVWQTGSGTQTNMNVNEVIAGRANELAGNPRGGKSPVHPNDHVNRAQSSNDSFPTAMHIAAA 151
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC1_BRAJA (Fumarate hydratase class II 1 OS=Bradyrhizobium japonicum GN=fumC1 PE=3 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 2.762e-37 Identity = 84/128 (65.62%), Postives = 98/128 (76.56%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAA 378 RS QNF IG +RMP +V A GI+K AA+ N E GL D AI++AA+EV +G L+DHFPLVVWQTGSGTQ+NMN NEVIANRA E+LG + G +K VHPNDHVN SQSSND+FPT MHIAAA Sbjct: 38 RSRQNFRIG--TDRMPISLVHALGIVKLAAAQSNRELGLLDQRRASAIIRAAREVIDGSLDDHFPLVVWQTGSGTQTNMNLNEVIANRANELLGGELGAKKPVHPNDHVNMSQSSNDSFPTAMHIAAA 163
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_COXBU (Fumarate hydratase class II OS=Coxiella burnetii GN=fumC PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 8.037e-37 Identity = 80/128 (62.50%), Postives = 93/128 (72.66%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSSNDTFPTVMHIAAA 378 RSL NF IG RE MP ++RAFG+LKK A N+E G + I++A +E+ GKLNDHFPL +WQTGSGTQ+NMN NEVI+NRA E+ G K G K VHPNDHVN SQSSNDTFPT MHI AA Sbjct: 25 RSLINFAIG--RETMPPELIRAFGVLKKAAVLTNVELGKVSQEKANFILKACEELIAGKLNDHFPLKIWQTGSGTQTNMNVNEVISNRAIELAGGKLGSKEPVHPNDHVNMSQSSNDTFPTAMHITAA 150
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_RICBR (Fumarate hydratase class II OS=Rickettsia bellii (strain RML369-C) GN=fumC PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.790e-36 Identity = 76/126 (60.32%), Postives = 98/126 (77.78%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRA-AEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RSL+NF IG ++RMPE ++R+ ILKKCAAKVN+E+G L+P I ++I +A + + +D+FPLVVWQTGSGTQ+NMN NEVIA+ A E+ G K G+ VHPNDHVN+ QSSND+FPT MHIA Sbjct: 28 RSLENFKIG--KQRMPEILIRSLAILKKCAAKVNLEFGDLEPKIAESIDKATSRILNAEFSDNFPLVVWQTGSGTQTNMNMNEVIASIANEELTGMKGGKSPVHPNDHVNKGQSSNDSFPTAMHIA 151
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_DEIRA (Fumarate hydratase class II OS=Deinococcus radiodurans GN=fumC PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.790e-36 Identity = 80/126 (63.49%), Postives = 95/126 (75.40%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPA-IGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS+ NF IG + P++RA GILKK AA+ N E G PA + I++AA EV GKL++HFPLVV+QTGSGTQSNMNANEVI+NRA E+ G + G +K VHPNDHVNR QSSNDTFPT MHIA Sbjct: 28 RSIHNFPIGRDTFVWGRPVIRALGILKKGAAQANAELGELPADVADLIVKAADEVIAGKLDEHFPLVVFQTGSGTQSNMNANEVISNRAIELAGGEMGSKKPVHPNDHVNRGQSSNDTFPTAMHIA 153 The following BLAST results are available for this feature:
BLAST of FC932255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932255 ID=FC932255; Name=FC932255; organism=Citrus clementina; type=EST; length=379bpback to top |