FC932255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_CHRVO (Fumarate hydratase class II OS=Chromobacterium violaceum GN=fumC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.516e-30 Identity = 71/128 (55.47%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAA 378 RSL +F I E+ MP ++ A +K+ A+ N G LD A AI AA EV G+ + FPL VWQTGSGTQSNMN NEV+ANRA+E+LG +RG ++VHPND VN QSSND FPT MH+AAA Sbjct: 29 RSLAHFRISSEK--MPPELILALARVKRACAEANRGLGKLDDAKAAAIAGAADEVLAGRHDGEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGRRGPGRLVHPNDDVNLGQSSNDIFPTAMHVAAA 154
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STAAR (Fumarate hydratase class II OS=Staphylococcus aureus (strain MRSA252) GN=fumC PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.623e-29 Identity = 66/125 (52.80%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L ++ +HPND VN+SQSSNDTFPT MH+A Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHHSDESIHPNDDVNKSQSSNDTFPTAMHVA 149
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STAAC (Fumarate hydratase class II OS=Staphylococcus aureus (strain COL) GN=fumC PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.623e-29 Identity = 66/125 (52.80%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN+SQSSNDTFPT MH+A Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAAIANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHQSDESIHPNDDVNKSQSSNDTFPTAMHVA 149
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_CHLPN (Fumarate hydratase class II OS=Chlamydia pneumoniae GN=fumC PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.120e-29 Identity = 68/115 (59.13%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 37 ERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSSNDTFPTVMHIAA 375 E MP ++RA +KKCAA+ N + G LD I+ AA E+ EG +HFPL VWQTGSGTQSNMN NEVIAN A G G K +HPNDHVN+SQSSND FPT MHIAA Sbjct: 35 ELMPYEVIRALVWIKKCAAQANQDLGFLDSKHCDMIVAAADEILEGGFEEHFPLKVWQTGSGTQSNMNVNEVIANLAIRHHGGVLGSKDPIHPNDHVNKSQSSNDVFPTAMHIAA 149
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STAAW (Fumarate hydratase class II OS=Staphylococcus aureus (strain MW2) GN=fumC PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.616e-29 Identity = 66/125 (52.80%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN+SQSSNDTFPT MH+A Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHQIDESIHPNDDVNKSQSSNDTFPTAMHVA 149
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STAAS (Fumarate hydratase class II OS=Staphylococcus aureus (strain MSSA476) GN=fumC PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.616e-29 Identity = 66/125 (52.80%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN+SQSSNDTFPT MH+A Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHQIDESIHPNDDVNKSQSSNDTFPTAMHVA 149
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STRAW (Fumarate hydratase class II OS=Streptomyces avermitilis GN=fumC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.168e-29 Identity = 70/126 (55.56%), Postives = 88/126 (69.84%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 R+++NF I G+R + + A +K AAKVN E G LD + +AI +AA EVAEG+ ++HFP+ V+QTGSGT SNMNANEVIA A E LG + VHPNDHVN SQSSND FP+ +HIAA Sbjct: 34 RAVENFPISGQR--LERAHIEALARIKGAAAKVNAELGVLDKDVAEAIQEAAAEVAEGRWDEHFPVDVFQTGSGTSSNMNANEVIATLATERLG-----RDVHPNDHVNASQSSNDVFPSSIHIAA 152
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STAAN (Fumarate hydratase class II OS=Staphylococcus aureus (strain N315) GN=fumC PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.168e-29 Identity = 66/125 (52.80%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN SQSSNDTFPT MH+A Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHQIDESIHPNDDVNESQSSNDTFPTAMHVA 149
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STAAM (Fumarate hydratase class II OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fumC PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.168e-29 Identity = 66/125 (52.80%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS +NF +G +ERMP +V F LK+ AA N + G L A AI+ A ++ G+L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN SQSSNDTFPT MH+A Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHQIDESIHPNDDVNESQSSNDTFPTAMHVA 149
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STAHJ (Fumarate hydratase class II OS=Staphylococcus haemolyticus (strain JCSC1435) GN=fumC PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.052e-28 Identity = 67/125 (53.60%), Postives = 87/125 (69.60%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS +NF +G +ERMP +V F LK+ AA N E G L A AI+ A + +G+L++HFPLVVWQTGSGTQSNMN NEV++ A + L + ++ +HPND VN+SQSSNDTFPT MH+A Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRGAALANHELGKLSDAKKDAIVYACDLILKGELDEHFPLVVWQTGSGTQSNMNVNEVVSFVANKYLKEQGIDESIHPNDDVNKSQSSNDTFPTAMHVA 149 The following BLAST results are available for this feature:
BLAST of FC932255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932255 ID=FC932255; Name=FC932255; organism=Citrus clementina; type=EST; length=379bpback to top |