FC932257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932257 vs. ExPASy Swiss-Prot
Match: VATL_ENTHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba histolytica GN=VMA3 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.489e-20 Identity = 52/127 (40.94%), Postives = 71/127 (55.91%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQS 381 KS VG++S+GVM+PE +++S+ PVV AG++G+YGLI+ +++ IN Y L + MAIGI GD GVR AQQPKLFVGM YG IV +I++S S Sbjct: 43 KSSVGISSVGVMKPEFIVRSVAPVVFAGIIGLYGLIVCILLF--INVTKSEYSLNRAFLDLGAGLTCGLCGLASGMAIGISGDCGVRGAAQQPKLFVGMLICLIFSEALALYGFIVALIMASTGENS 167
BLAST of FC932257 vs. ExPASy Swiss-Prot
Match: VATL2_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Neurospora crassa GN=vma-11 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 9.999e-20 Identity = 47/126 (37.30%), Postives = 74/126 (58.73%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINP--KAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRA 372 KSG+G+A +G RP+L+MK ++PVVM+G++ +Y L++AV+I+ + P + Y LF+G+ IGIVGD GVR+ Q ++FVGM YGLIV +IL++++ Sbjct: 40 KSGIGIAGVGTFRPDLIMKCLIPVVMSGIIAVYALVVAVLIAQDLGPPGSGQHYSLFNGFMHLACGLSVGLTGLAAGYCIGIVGDKGVRSFMLQSRIFVGMVLILIFGEVLGLYGLIVALILNTKS 165
BLAST of FC932257 vs. ExPASy Swiss-Prot
Match: VATL2_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Schizosaccharomyces pombe GN=vma11 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.306e-19 Identity = 47/122 (38.52%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 4 SGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 369 +G G+A++G RPE+VMKS++PVVM+G++G+YGL+++V+I+ ++P Y LF G+ AIG+VGD GV++ +Q ++FV M YGLIVG+IL ++ Sbjct: 36 AGRGIAAVGAFRPEIVMKSLIPVVMSGIIGVYGLVMSVLIAGDMSPD-NDYSLFSGFIHLSAGLAVGLTGVAAGYAIGVVGDRGVQSFMRQDRIFVSMVLILIFAEVLGLYGLIVGLILQTK 156
BLAST of FC932257 vs. ExPASy Swiss-Prot
Match: VATL_ENTDI (V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba dispar GN=VMA3 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.228e-19 Identity = 51/127 (40.16%), Postives = 70/127 (55.12%), Query Frame = 1 Query: 1 KSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQS 381 KS VG++S+GVM+PE +M+S+ PVV AGV+G+YGLI+ +++ IN Y L + M+IGI GD GVR AQQPKLFV M YG IV +I+++ S Sbjct: 41 KSSVGISSVGVMKPEFIMRSLFPVVFAGVIGLYGLIVCIVLF--INVNKSEYSLNRAFLDLGAGLTCGLCGLASGMSIGISGDCGVRGAAQQPKLFVSMLICLIFSEALALYGFIVALIMAATGDNS 165 The following BLAST results are available for this feature:
BLAST of FC932257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932257 ID=FC932257; Name=FC932257; organism=Citrus clementina; type=EST; length=484bpback to top |