FC932264

Overview
NameFC932264
Unique NameFC932264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_CANTR (Isocitrate lyase OS=Candida tropicalis GN=ICL1 PE=3 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.066e-85
Identity = 162/240 (67.50%), Postives = 186/240 (77.50%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQPLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAGSNANKKNLIDQYLAASKGKSNT---ESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVAIRA ADI GS+LLA+ARTDSEAATLITSTIDHRDH FI+G+TNP    L  LM  AE  G  G +L  IE +WT +AGLKLF+EAVID I AG+ +NK+ LI ++       S+T   E++ +AK LTG DI +NW+  R REG+YRYQGGTQCAV R  A+AP+ADLIWMES LPDYNQAKEFADGV A  P+Q LAYNLSPSFNW KAMP +EQETYI RLGQLGY WQFIT
Sbjct:  225 INRLVAIRASADIFGSNLLAVARTDSEAATLITSTIDHRDHYFIIGATNPESGDLAALMAEAEAKGIYGDELARIETEWTKKAGLKLFHEAVIDEIKAGNYSNKEALIKKFTDKVNPLSHTSHKEAKKLAKELTGKDIYFNWDVARAREGYYRYQGGTQCAVMRGRAFAPYADLIWMESALPDYNQAKEFADGVKAAVPDQWLAYNLSPSFNWNKAMPADEQETYIKRLGQLGYVWQFIT 464          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_CANAL (Isocitrate lyase OS=Candida albicans GN=ICL1 PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.625e-84
Identity = 160/240 (66.67%), Postives = 184/240 (76.67%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQPLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAGSNANKKNLIDQYLAASKGKSNT---ESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVAIRA ADI GS+LLA+ARTDSEAATLITSTIDHRDH FI+G+TNP    L  LM  AE  G  G +L AIE +WT +AGLKLF+EAVID I  G+ +NK  LI ++       S+T   E++ +AK LTG DI +NW+  R REG+YRYQGGTQCAV R  A+AP+ADLIWMES LPDY QAKEFADGV A  P+Q LAYNLSPSFNW KAMP +EQETYI RLG+LGY WQFIT
Sbjct:  225 INRLVAIRASADIFGSNLLAVARTDSEAATLITSTIDHRDHYFIIGATNPEAGDLAALMAEAESKGIYGNELAAIESEWTKKAGLKLFHEAVIDEIKNGNYSNKDALIKKFTDKVNPLSHTSHKEAKKLAKELTGKDIYFNWDVARAREGYYRYQGGTQCAVMRGRAFAPYADLIWMESALPDYAQAKEFADGVKAAVPDQWLAYNLSPSFNWNKAMPADEQETYIKRLGKLGYVWQFIT 464          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_DEBHA (Isocitrate lyase OS=Debaryomyces hansenii GN=ICL1 PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.440e-82
Identity = 151/240 (62.92%), Postives = 184/240 (76.67%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQPLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAGSNANKKNLIDQY---LAASKGKSNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVAIRA ADI+GSDLL +ARTDSEAATL+TSTIDHRDH F++G+TNP    L  LM  AE  G  G +L +IE +WT +AGLKLF+EAVID IN G+ +NK+ LI ++   +      SN E+R +A+ + G D+ ++W+  R REG+YRYQGGTQCAV R  AYAP+AD+IWMES LPD+ QAKEFA+GV A WP+Q LAYNLSPSFNW +AMP  EQETYI RL +LGY WQFIT
Sbjct:  225 INRLVAIRASADILGSDLLCVARTDSEAATLLTSTIDHRDHYFVLGATNPESPDLAALMAEAESNGIYGDKLASIEVEWTKKAGLKLFHEAVIDEINNGNFSNKQALIKKFTDKVNPLSATSNKEARKLAREILGKDVFFDWDVARAREGYYRYQGGTQCAVMRGQAYAPYADMIWMESALPDFKQAKEFAEGVKAKWPDQWLAYNLSPSFNWNRAMPPNEQETYIKRLSELGYVWQFIT 464          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_CANGA (Isocitrate lyase OS=Candida glabrata GN=ICL1 PE=3 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 8.463e-75
Identity = 139/240 (57.92%), Postives = 178/240 (74.17%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQPLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAGSNANKKNLIDQY---LAASKGKSNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLV IR  ADIM S+L+ +ARTDSEAATLI+STID RDH F+VG+TNP I+P  + M  A  AG +G +LQ +E  W  +AGLKLF+EA  D +N  S +NK+ +I ++   +      S+ E++ +AK L G DI ++W+ PR REG YRY+GGTQC+V RA A+AP+ADL+WMES  PD+ QA+EFA+GV A +P+Q LAYNLSPSFNW KAM  +EQ T+I RLGQLGY WQFIT
Sbjct:  231 INRLVTIRMCADIMHSELVIVARTDSEAATLISSTIDTRDHYFVVGATNPDIEPFAEYMDRAIMAGVSGDELQKLEAAWIEKAGLKLFHEAFADEVNKSSVSNKQEIIKKFNDKVGPLTETSHREAKKLAKELLGKDIFFDWDLPRVREGLYRYRGGTQCSVMRARAFAPYADLVWMESNYPDFEQAREFAEGVKAKYPDQWLAYNLSPSFNWPKAMSVDEQATFIERLGQLGYIWQFIT 470          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_PICPA (Isocitrate lyase OS=Pichia pastoris GN=ICL1 PE=3 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.885e-74
Identity = 134/241 (55.60%), Postives = 175/241 (72.61%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQPLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAGSNANKKNLIDQYLAAS----KGKSNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVAIR  AD+  SDL+A+ARTDSEAATL+TSTID RDH F++G+TNP I  L D++  AE  GK GA+L  +E  W+ +AGLKL++EAV + I+  S+   K       +A      G S+ E+  +AK + G ++ ++WE+P+ REG+YRYQGGT+CA+ RA AY+P+ADL+WMESK+PDY +A +FA GV        LAYNLSPSFNW KAM  +EQETYI RLG+LGY+WQFIT
Sbjct:  228 INRLVAIRTSADLFQSDLIAVARTDSEAATLLTSTIDKRDHYFVIGATNPDIPDLIDVLTEAELQGKYGAELSQLEADWSKKAGLKLYHEAVFEAIDKSSSVKDKQAAKDKFSAKVGPLTGTSHKEAAKLAKEILGEEVFFDWEAPKVREGYYRYQGGTECAIMRARAYSPYADLVWMESKVPDYQEAVDFAKGVKTFTQTNWLAYNLSPSFNWNKAMSPDEQETYIKRLGKLGYNWQFIT 468          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_YEAST (Isocitrate lyase OS=Saccharomyces cerevisiae GN=ICL1 PE=1 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.462e-74
Identity = 137/240 (57.08%), Postives = 179/240 (74.58%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQPLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAGSNANKKNLIDQY---LAASKGKSNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKAMPREEQETYITRLGQLGYSWQFIT 712
            +NRLV IR  ADIM SDL+ +ARTDSEAATLI+STID RDH FIVG+TNP+I+P  +++  A  +G +G +L  IE +W  +AGLKLF+EAVID I   + +NK+ LI ++   +      S+ E++ +AK + G +I ++WE PR REG YRY+GGTQC++ RA A+AP+ADL+WMES  PD+ QAKEFA+GV   +P+Q LAYNLSPSFNW KAM  +EQ T+I RLG LGY WQFIT
Sbjct:  232 VNRLVTIRMCADIMHSDLIVVARTDSEAATLISSTIDTRDHYFIVGATNPNIEPFAEVLNDAIMSGASGQELADIEQKWCRDAGLKLFHEAVIDEIERSALSNKQELIKKFTSKVGPLTETSHREAKKLAKEILGHEIFFDWELPRVREGLYRYRGGTQCSIMRARAFAPYADLVWMESNYPDFQQAKEFAEGVKEKFPDQWLAYNLSPSFNWPKAMSVDEQHTFIQRLGDLGYIWQFIT 471          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_COPCI (Isocitrate lyase OS=Coprinopsis cinerea GN=ACU-7 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.328e-71
Identity = 137/240 (57.08%), Postives = 177/240 (73.75%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQPLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTI-NAGSNANKKNLIDQYLAASKGKSNTESRAIAKNLTGVDII--WNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVAIR Q DIMG + L +ARTDSEAATLITS ID RDH FI GSTNPS+ PLN++MV AE  GK G QLQAIED W   A L+LF +A+   + N G++   ++ +++ +A     S +++ A+A+   G+  +  WNW++PRTREG+YRYQGGT+CA++RA A+AP+ADL+WME+K P   QAKEFA GVHAV P Q LAYNLSPSFNWK    R++ + Y+  LG+LG+ WQFIT
Sbjct:  218 INRLVAIRLQYDIMGVENLVVARTDSEAATLITSNIDDRDHPFIQGSTNPSLPPLNNVMVEAEAQGKTGDQLQAIEDGWIKAANLQLFPQALAQALANEGAS---RSTVEKLVARVSRLSWSQAVAVAQKEFGLKQVPYWNWDAPRTREGYYRYQGGTECAIHRANAFAPYADLLWMETKKPILAQAKEFAAGVHAVHPGQWLAYNLSPSFNWKLLPQRQDMQAYVWELGKLGFVWQFIT 454          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_COPC7 (Isocitrate lyase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=ACU-7 PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.826e-69
Identity = 136/241 (56.43%), Postives = 177/241 (73.44%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQPLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTI-NAGSNANKKNLIDQYLAASKGKSNTESRAIAKNLTGVDII--WNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKA-MPREEQETYITRLGQLGYSWQFIT 712
            INRLVAIR Q DIMG + L +ARTDSEAATLITS ID RDH FI GSTNPS+ PLN++MV AE  GK G QLQAIED W   A L+LF +A+   + N G++   ++ +++ +A     S  ++ A+A+   G+  +  WNW++PRTREG+YRYQGGT+CA++RA A+AP+ADL+WME+K P   QAKEFA GVHAV P Q LAYNLSPSFNW+ A +  ++ + Y+  LG+LG+ WQFIT
Sbjct:  218 INRLVAIRLQYDIMGVENLVVARTDSEAATLITSNIDDRDHPFIQGSTNPSLPPLNNVMVEAEAQGKTGDQLQAIEDGWIKAANLQLFPQALAQALANEGAS---RSTVEKLVARVSRLSWPQAVAVAQKEFGLKQVPYWNWDAPRTREGYYRYQGGTECAIHRANAFAPYADLLWMETKKPILAQAKEFAAGVHAVHPGQWLAYNLSPSFNWEAAGLNAQDMQAYVWELGKLGFVWQFIT 455          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_KLULA (Isocitrate lyase OS=Kluyveromyces lactis GN=ICL1 PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.019e-68
Identity = 132/242 (54.55%), Postives = 171/242 (70.66%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ--PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAGSNANKKNLIDQYLAASKGKSNT---ESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKAMPREEQETYITRLGQLGYSWQFIT 712
            INRL+  R  AD++GSDL+ +ARTDSEAATL++ST D RDH FI+G++NP+++  PLNDL+  A   G     LQ IE +W  +A +KLF+E   D   A      +++IDQ+ +     S T   E +A+AK L G ++ ++W+ PR REG YRYQGGTQC+V RA A+AP+ADL WMES  PDY QAKEFA+GV A +P + +AYNLSPSFNW KAM  +EQET+I RLG LGY WQFIT
Sbjct:  223 INRLITCRMAADVLGSDLILVARTDSEAATLLSSTADSRDHYFILGASNPAVKGKPLNDLLNKAILDGATIDDLQTIEKEWLAKADVKLFHEVFADAAKAAGK--DQSVIDQFNSKVNPLSETSIYEMQALAKELLGTELFFDWDLPRGREGLYRYQGGTQCSVMRARAFAPYADLCWMESNYPDYEQAKEFAEGVTAKFPGKWMAYNLSPSFNWTKAMSVDEQETFIQRLGDLGYIWQFIT 462          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_ASHGO (Isocitrate lyase OS=Ashbya gossypii GN=ICL1 PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.444e-68
Identity = 127/242 (52.48%), Postives = 174/242 (71.90%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ-PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAG-SNANKKNLIDQY---LAASKGKSNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKAMPREEQETYITRLGQLGYSWQFIT 712
            I+RLV +R  AD+M S+L+ +ARTDSEAATL++S ID RDH +IVG++NP +  PL +++ AA+QAG +G +L  +E+ W  +A L+LF+EA  D +NA  S  +K  +I ++   +    G S  E R + + L G D+ ++W+ PR REG YRY+GGTQCA+ RA A+AP+ADL+W ES  PD+ QAKEFA GV   +P + +AYNLSPSFNW KAMP +EQE YI RLG++GY WQFIT
Sbjct:  232 ISRLVTVRMCADVMHSNLVLVARTDSEAATLLSSNIDARDHYYIVGASNPEVTVPLIEVLDAAQQAGASGDRLAQLEEDWCKKAKLRLFHEAFADQVNASPSIKDKAGVIAKFNSQIGPQTGASIREMRKLGRELLGQDVYFDWDLPRAREGLYRYKGGTQCAIMRARAFAPYADLVWFESNFPDFQQAKEFAQGVREKFPNKWMAYNLSPSFNWPKAMPPKEQENYIQRLGEIGYVWQFIT 473          
The following BLAST results are available for this feature:
BLAST of FC932264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ACEA_CANTR1.066e-8567.50Isocitrate lyase OS=Candida tropicalis GN=ICL1 PE=... [more]
ACEA_CANAL2.625e-8466.67Isocitrate lyase OS=Candida albicans GN=ICL1 PE=3 ... [more]
ACEA_DEBHA1.440e-8262.92Isocitrate lyase OS=Debaryomyces hansenii GN=ICL1 ... [more]
ACEA_CANGA8.463e-7557.92Isocitrate lyase OS=Candida glabrata GN=ICL1 PE=3 ... [more]
ACEA_PICPA1.885e-7455.60Isocitrate lyase OS=Pichia pastoris GN=ICL1 PE=3 S... [more]
ACEA_YEAST2.462e-7457.08Isocitrate lyase OS=Saccharomyces cerevisiae GN=IC... [more]
ACEA_COPCI3.328e-7157.08Isocitrate lyase OS=Coprinopsis cinerea GN=ACU-7 P... [more]
ACEA_COPC71.826e-6956.43Isocitrate lyase OS=Coprinopsis cinerea (strain Ok... [more]
ACEA_KLULA2.019e-6854.55Isocitrate lyase OS=Kluyveromyces lactis GN=ICL1 P... [more]
ACEA_ASHGO3.444e-6852.48Isocitrate lyase OS=Ashbya gossypii GN=ICL1 PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionC34206F02EF PostHarveN Citrus clementina cDNA clone C34206F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932264 ID=FC932264; Name=FC932264; organism=Citrus clementina; type=EST; length=712bp
GATCAACCGCCTGGTTGCTATCCGCGCCCAGGCTGATATCATGGGCTCCG
ATCTCCTGGCCATTGCCCGCACCGACTCCGAGGCCGCCACCCTCATCACA
TCGACCATCGACCACCGCGACCACGCCTTTATCGTCGGCTCCACAAACCC
CAGCATACAGCCCCTCAACGACCTCATGGTGGCCGCCGAACAGGCCGGCA
AGAACGGCGCCCAGCTGCAGGCAATCGAGGATCAATGGACTACCGAGGCG
GGCCTCAAGCTCTTCAACGAAGCCGTCATCGACACCATCAACGCCGGCTC
TAACGCCAACAAGAAAAACCTCATCGATCAGTATCTCGCTGCCTCCAAGG
GCAAGAGCAACACCGAATCCCGCGCCATCGCCAAGAATCTCACCGGCGTC
GACATCATCTGGAACTGGGAATCTCCCCGTACCCGCGAGGGCTTCTACCG
CTACCAGGGCGGCACGCAGTGCGCCGTCAACCGCGCCATCGCATACGCTC
CTTTTGCCGATCTGATCTGGATGGAGAGCAAGCTGCCCGACTACAACCAG
GCCAAGGAATTCGCCGACGGCGTTCACGCCGTATGGCCCGAACAAAAACT
CGCCTACAATCTCTCCCCGTCCTTCAACTGGAAGAAGGCTATGCCCCGCG
AAGAGCAGGAGACGTACATCACGCGTCTCGGCCAGCTCGGCTACTCGTGG
CAATTCATCACC
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