FC932264

Overview
NameFC932264
Unique NameFC932264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_ARATH (Isocitrate lyase OS=Arabidopsis thaliana GN=ICL PE=1 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 6.510e-59
Identity = 119/245 (48.57%), Postives = 161/245 (65.71%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ--PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAGS-NANKKNL-IDQYLAASKGK---SNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNW-KKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVA R Q D+MG++ + +ARTD+ AATLI S ID RDH FI+G+TNPS++   L+ L+      GKNG  LQ+IEDQW   AGL  F+EAV+  I   + N N+KN  + ++L  ++ +   SN + R +A  L   D+ W+W+ PRTREGFYR+QG    AV R  A+A  AD+IWME+  PD N+  +FA+G+ +  PE  LAYNLSPSFNW    M  ++   +I R+ +LGY WQFIT
Sbjct:  228 INRLVAARLQFDVMGTETVLVARTDAVAATLIQSNIDARDHQFILGATNPSLRGKSLSSLLAEGMTVGKNGPALQSIEDQWLGSAGLMTFSEAVVQAIKRMNLNENEKNQRLSEWLTHARYENCLSNEQGRVLAAKLGVTDLFWDWDLPRTREGFYRFQGSVAAAVVRGWAFAQIADIIWMETASPDLNECTQFAEGIKSKTPEVMLAYNLSPSFNWDASGMTDQQMVEFIPRIARLGYCWQFIT 472          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_DENCR (Isocitrate lyase OS=Dendrobium crumenatum GN=ICL PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.400e-58
Identity = 122/245 (49.80%), Postives = 161/245 (65.71%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ--PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAGS--NANKKNLIDQYLAA---SKGKSNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKA-MPREEQETYITRLGQLGYSWQFIT 712
            INRLVA R Q D+MG + + +ARTD+ AATLI S +D RDH FI+G+TNP  +   L  ++ AA  AGK GA LQAIED W + AGL  F++AVI+ IN  +     K+  ++++ AA   SK  SN + R IA+ L   +I W+W+  RTREGFYR++G  + AV R  A+AP ADLIWME+  PD  +  +FA G+ A  PE  LAYNLSPSFNW  A M  EE   +I R+ ++G+ WQFIT
Sbjct:  227 INRLVAARLQFDVMGVETVLVARTDAVAATLIQSNVDLRDHQFILGATNPDFKRRSLAAVLSAAMAAGKTGAVLQAIEDDWLSRAGLMTFSDAVINGINRQNLPEYEKQRRLNEWAAATEYSKCVSNEQGREIAERLGAGEIFWDWDIARTREGFYRFRGSVEAAVVRGRAFAPHADLIWMETSSPDLVECGKFAQGMKASHPEIMLAYNLSPSFNWDAAGMTDEEMRDFIPRIAKMGFCWQFIT 471          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_CUCMA (Isocitrate lyase OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.228e-57
Identity = 117/245 (47.76%), Postives = 162/245 (66.12%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ--PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTI--NAGSNANKKNLIDQYLAAS---KGKSNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNW-KKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVA R Q D+MG + + +ARTD+ AATLI + +D RDH FI+G+TNP+++   L  ++  A  AGK GA+LQA+EDQW + A LK F+E V D I  + G+ + K+  +D+++  S   K  SN + R IA+ L   ++ W+W+ PRTREGFYR++G    A+ R  A+AP ADLIWME+  PD  +   FA GV +V PE  LAYNLSPSFNW    M  ++ E +I  + +LG+ WQFIT
Sbjct:  228 INRLVAARLQFDVMGVETVLVARTDAVAATLIQTNVDSRDHQFILGATNPNLRGKSLAGVLAEAMAAGKTGAELQALEDQWISMAQLKTFSECVTDAIMNSNGTESEKRRKLDEWMNHSSYEKCISNEQGREIAEKLGLKNLFWDWDLPRTREGFYRFKGSVMAAIVRGWAFAPHADLIWMETSSPDLVECTTFAKGVKSVHPEIMLAYNLSPSFNWDASGMSDKQMEEFIPTIARLGFCWQFIT 472          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_CUCSA (Isocitrate lyase OS=Cucumis sativus PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.735e-57
Identity = 118/246 (47.97%), Postives = 161/246 (65.45%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ--PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTI---NAGSNANKKNLIDQYLAAS---KGKSNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNW-KKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVA R Q D+MG + + +ARTD+ AATLI + +D RDH FI+G+TNP+++   L   +  A  AGK GA+LQA+EDQW + A LK F+E V D I   NA  N  ++ L D+++  S   K  SN + R IA+ L   ++ W+W+ PRTREGFYR++G    A+ R  A+AP ADLIWME+  PD  +   FA G+ ++ PE  LAYNLSPSFNW    M  ++ E +I R+ +LG+ WQFIT
Sbjct:  228 INRLVAARLQFDVMGVETILVARTDAVAATLIQTNVDKRDHQFILGATNPNLRGKSLAGALAEAMAAGKTGAELQALEDQWISMAQLKTFSECVTDAIMNTNATENEKRRKL-DEWMNHSSYEKCISNEQGREIAEKLGLKNLFWDWDLPRTREGFYRFKGSVMAAIVRGWAFAPHADLIWMETSSPDLVECTTFAKGMKSIHPETMLAYNLSPSFNWDASGMSDKQMEEFIPRIARLGFCWQFIT 472          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_BRANA (Isocitrate lyase OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.665e-57
Identity = 116/245 (47.35%), Postives = 157/245 (64.08%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ--PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAG--SNANKKNLIDQYLAASKGK---SNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNW-KKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVA R Q D+MG++ + +ARTD+ AATLI S ID RDH FI+G TNPS++   L+ L+      G NG  LQAIEDQW + A L  F++AV++ +     S   K   ++++L  ++ +   SN + R +A  L   D+ W+W+ PRTREGFYR+QG    AV R  A+A  ADLIWME+  PD N+  +FA+GV +  PE  LAYNLSPSFNW    M  ++   +I R+ +LGY WQFIT
Sbjct:  228 INRLVAARLQFDVMGTETVLVARTDAVAATLIQSNIDSRDHQFILGVTNPSLRGKSLSSLLAEGMAVGNNGPALQAIEDQWLSSARLMTFSDAVVEALKRMNLSENEKSRRVNEWLNHARYENCLSNEQGRELAAKLGVTDLFWDWDLPRTREGFYRFQGSVTAAVVRGWAFAQIADLIWMETASPDLNECTQFAEGVKSKTPEVMLAYNLSPSFNWDASGMTDQQMMEFIPRIARLGYCWQFIT 472          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_PINTA (Isocitrate lyase OS=Pinus taeda GN=ICL 8 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.357e-56
Identity = 111/247 (44.94%), Postives = 163/247 (65.99%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ--PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINA--GSNANKKNLIDQYLAASKGKSNT-----ESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNWKKA-MPREEQETYITRLGQLGYSWQFIT 712
            +NR+VA R Q DIMG + L +ARTD+ AATLI + +D RDH FI+G+TNP+++  PL D++  A  +GK+GA LQA+ED+W   A LKLF++ V+D I A   S   K   + +++  + G +       +++ +A+ L   ++ W+W+ PRTREGFYR+QG  + A+ R  A+ P AD+IWME+  PD  + ++FA GV +  PE  LAYNLSPSFNW  + M  E+ + +I  + +LGY WQFIT
Sbjct:  230 VNRMVAARLQFDIMGVETLLVARTDAVAATLIQTNVDARDHQFILGATNPNLKGKPLADVLARAMASGKSGADLQAVEDEWMAMADLKLFSDCVVDGIKALNVSEQEKGRRLGEWMQQTGGNTGNVLSYYQAKELAEKLGISNLFWDWDLPRTREGFYRFQGSVKAAIVRGWAFGPHADIIWMETSSPDMVECRDFALGVKSKHPEIMLAYNLSPSFNWDASRMTDEQMKNFIPEIARLGYCWQFIT 476          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_GOSHI (Isocitrate lyase OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.315e-56
Identity = 115/245 (46.94%), Postives = 160/245 (65.31%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ--PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAGS--NANKKNLIDQYLAAS---KGKSNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNW-KKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVA R Q D+MG + + +ARTD+ AATLI + +D RDH FI+G+TNP+++   L +++     AGKNG QLQAIED W   A LK F+E V+D I + +     K+  +++++  S   K  SN ++R IA+ L   ++ W+W+ PRTREGFYR++G    A+ R  A+AP ADLIWME+  PD  +   FA+GV ++ PE  LAYNLSPSFNW    M  E    +I R+ +LG+ WQFIT
Sbjct:  228 INRLVAARLQFDVMGVETVLVARTDAVAATLIQTNVDTRDHQFILGATNPNLRGKSLANMLAEGMAAGKNGPQLQAIEDNWLAIAQLKTFSECVMDAIKSMNITEDEKRRRMNEWMNHSSYDKCLSNEQAREIAERLGLQNLFWDWDLPRTREGFYRFRGSVMAAIVRGWAFAPHADLIWMETSSPDMVECTRFAEGVKSMHPEIMLAYNLSPSFNWDASGMTDEHMRDFIPRIAKLGFCWQFIT 472          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA1_SOYBN (Isocitrate lyase 1 (Fragment) OS=Glycine max GN=ICL1 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.024e-56
Identity = 113/246 (45.93%), Postives = 162/246 (65.85%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ--PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTINAGSNAN---KKNLIDQYLAASKGK---SNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNW-KKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVA R Q D+MG + + +ARTD+EAA LI S ID RDH FI+G TNP+++   L  LM     AGKNGA+LQA+ED+W ++A LK  +EAV++ I   +N     K+  +++++  S  +   SN E R IA+ L   ++ W+W+ PRTREGFYR++G    +V R  A++P AD+IWME+  P+  +  EF++GV +  P+  L YNLSPSFNW    M  E+ + +I ++ +LGY WQFIT
Sbjct:  210 INRLVAARLQFDVMGVETVLVARTDAEAANLIQSNIDTRDHQFILGVTNPNLKGKSLATLMQQGMAAGKNGAELQALEDEWLSKAQLKTLSEAVVEAIERQNNIGEEEKRRKLNEWMHHSSYERCLSNEEGREIAEKLGVRNLFWDWDLPRTREGFYRFKGSVTASVVRGCAFSPHADVIWMETASPNVVECTEFSEGVRSKHPQMMLGYNLSPSFNWDASGMSDEQMKDFIPKIAKLGYVWQFIT 455          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA_RICCO (Isocitrate lyase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.560e-55
Identity = 114/245 (46.53%), Postives = 154/245 (62.86%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ--PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTI---NAGSNANKKNLID--QYLAASKGKSNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNW-KKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVA R Q D+MG + L +ARTD+EAA LI S +D RDH FI+G TNP+++   L  L+      GK GA+LQA ED W   A LK F E V+D I   NAG +  ++ + +   + +  K  S  + R IA  +   ++ W+W+ PRTREGFYR++G    AV R  A+AP AD+IWME+  PD+ +   FA+GV ++ PE  LAYNLSPSFNW    M  E+   +I R+ +LG+ WQFIT
Sbjct:  228 INRLVAARLQFDVMGVETLLVARTDAEAANLIQSNVDTRDHQFILGVTNPNLRGKSLATLLATGMANGKTGAELQATEDNWLAMAQLKTFPECVMDAIKNMNAGEDEKRRRMNEWMNHTSYDKCLSYEQGREIADRMGLKNLFWDWDLPRTREGFYRFKGSVMAAVVRGRAFAPHADIIWMETAKPDFAECTAFAEGVKSMHPEIMLAYNLSPSFNWDASGMTDEQMRDFIPRIARLGFCWQFIT 472          
BLAST of FC932264 vs. ExPASy Swiss-Prot
Match: ACEA2_SOYBN (Isocitrate lyase 2 (Fragment) OS=Glycine max GN=ICL2 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.270e-54
Identity = 111/245 (45.31%), Postives = 159/245 (64.90%), Query Frame = 2
Query:    2 INRLVAIRAQADIMGSDLLAIARTDSEAATLITSTIDHRDHAFIVGSTNPSIQ--PLNDLMVAAEQAGKNGAQLQAIEDQWTTEAGLKLFNEAVIDTI---NAGSNANKKNLID--QYLAASKGKSNTESRAIAKNLTGVDIIWNWESPRTREGFYRYQGGTQCAVNRAIAYAPFADLIWMESKLPDYNQAKEFADGVHAVWPEQKLAYNLSPSFNW-KKAMPREEQETYITRLGQLGYSWQFIT 712
            INRLVA R Q D+MG + + +ARTD+EAA LI S ID RDH FI+G TNP+++   L  LM     AGK+GA+LQA+ED+W ++A LK  +EAV++ I   N G    ++ L +   + +  +  SN E R IA+ L   ++ W+W+ PRTREGFYR++G    +V R  A++P AD+IWME+  P+  +  +F++GV +  P+  L YNLSPSFNW    M  E+   +I ++ +LGY WQFIT
Sbjct:  210 INRLVAARLQFDVMGVETVLVARTDAEAANLIQSNIDTRDHQFILGVTNPNLKGKSLATLMQQGMAAGKSGAELQALEDEWLSKAQLKTLSEAVVEAIERQNIGEEEKRRKLNEWMHHSSYERCLSNEEGREIAEKLGVRNLFWDWDLPRTREGFYRFKGSVIASVVRGWAFSPHADVIWMETASPNVIECTQFSEGVRSKHPQMMLGYNLSPSFNWDASGMSDEQMRDFIPKIAKLGYVWQFIT 454          
The following BLAST results are available for this feature:
BLAST of FC932264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ACEA_ARATH6.510e-5948.57Isocitrate lyase OS=Arabidopsis thaliana GN=ICL PE... [more]
ACEA_DENCR9.400e-5849.80Isocitrate lyase OS=Dendrobium crumenatum GN=ICL P... [more]
ACEA_CUCMA1.228e-5747.76Isocitrate lyase OS=Cucurbita maxima PE=2 SV=1[more]
ACEA_CUCSA2.735e-5747.97Isocitrate lyase OS=Cucumis sativus PE=3 SV=1[more]
ACEA_BRANA4.665e-5747.35Isocitrate lyase OS=Brassica napus PE=2 SV=1[more]
ACEA_PINTA1.357e-5644.94Isocitrate lyase OS=Pinus taeda GN=ICL 8 PE=2 SV=1[more]
ACEA_GOSHI2.315e-5646.94Isocitrate lyase OS=Gossypium hirsutum PE=2 SV=1[more]
ACEA1_SOYBN3.024e-5645.93Isocitrate lyase 1 (Fragment) OS=Glycine max GN=IC... [more]
ACEA_RICCO2.560e-5546.53Isocitrate lyase OS=Ricinus communis PE=2 SV=1[more]
ACEA2_SOYBN1.270e-5445.31Isocitrate lyase 2 (Fragment) OS=Glycine max GN=IC... [more]

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Properties
Property NameValue
Genbank descriptionC34206F02EF PostHarveN Citrus clementina cDNA clone C34206F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932264 ID=FC932264; Name=FC932264; organism=Citrus clementina; type=EST; length=712bp
GATCAACCGCCTGGTTGCTATCCGCGCCCAGGCTGATATCATGGGCTCCG
ATCTCCTGGCCATTGCCCGCACCGACTCCGAGGCCGCCACCCTCATCACA
TCGACCATCGACCACCGCGACCACGCCTTTATCGTCGGCTCCACAAACCC
CAGCATACAGCCCCTCAACGACCTCATGGTGGCCGCCGAACAGGCCGGCA
AGAACGGCGCCCAGCTGCAGGCAATCGAGGATCAATGGACTACCGAGGCG
GGCCTCAAGCTCTTCAACGAAGCCGTCATCGACACCATCAACGCCGGCTC
TAACGCCAACAAGAAAAACCTCATCGATCAGTATCTCGCTGCCTCCAAGG
GCAAGAGCAACACCGAATCCCGCGCCATCGCCAAGAATCTCACCGGCGTC
GACATCATCTGGAACTGGGAATCTCCCCGTACCCGCGAGGGCTTCTACCG
CTACCAGGGCGGCACGCAGTGCGCCGTCAACCGCGCCATCGCATACGCTC
CTTTTGCCGATCTGATCTGGATGGAGAGCAAGCTGCCCGACTACAACCAG
GCCAAGGAATTCGCCGACGGCGTTCACGCCGTATGGCCCGAACAAAAACT
CGCCTACAATCTCTCCCCGTCCTTCAACTGGAAGAAGGCTATGCCCCGCG
AAGAGCAGGAGACGTACATCACGCGTCTCGGCCAGCTCGGCTACTCGTGG
CAATTCATCACC
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