FC932351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: Y143_SYNY3 (Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis sp. (strain PCC 6803) GN=slr0143 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 38/128 (29.69%), Postives = 66/128 (51.56%), Query Frame = 3 Query: 273 IQTLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWNCKGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 656 ++ GHT ++ + + P +FA+ D+TV+IW+ + KGH++ V SVS++ G +LA+ RD++V +W G + ++VL GH + V Q+ P L S D I++W Sbjct: 594 LREFTGHTGSIYRVDFSPNG------KIFATAGQDQTVKIWDLDGNLLQ-TLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSG---KTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLW 711
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: SPG16_HUMAN (Sperm-associated antigen 16 protein OS=Homo sapiens GN=SPAG16 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 36/123 (29.27%), Postives = 58/123 (47.15%), Query Frame = 3 Query: 288 GHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWNCKGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 656 GHTD + + P+ A+ SGD TV++W+ +GH V S +W++ G +A+ DK+ IW+V N C L GH V +++ P + L + S D T+ +W Sbjct: 392 GHTDWLSDCCFHPSGDK------LATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDV---NSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIW 505
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: WDR12_PONAB (Ribosome biogenesis protein WDR12 OS=Pongo abelii GN=WDR12 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 47/162 (29.01%), Postives = 72/162 (44.44%), Query Frame = 3 Query: 261 ELREIQTLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWN----CKGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFE-----------------------CVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVWWAE 665 E + I T+ GHTD V +AW DS++ + S S D+T+ +WE + C+GH V S++ + SGT + DK + IW +P +E + V L GH + V V W ++ S S+D+TI+VW E Sbjct: 129 EGKSIMTIVGHTDVVKDVAWVKK---DSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPVVTLSGHMEAVSSVLWSDAEEIC-SASWDHTIRVWDVE 286
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: PRP4_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 38/128 (29.69%), Postives = 61/128 (47.66%), Query Frame = 3 Query: 273 IQTLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWNCKGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 656 +QT EGH DR+ +A+ P+ + S DKT R+W+ + + +GH V +++ G L A+CG D +W++ G + V QGH + V V + P L S DN ++W Sbjct: 332 LQTFEGHLDRLARVAFHPSG------KYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRS---ILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIW 450
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: PF20_CHLRE (Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii GN=PF20 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 39/127 (30.71%), Postives = 66/127 (51.97%), Query Frame = 3 Query: 276 QTLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWNCKGHENEVKSVSWNASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHPTMDVLFSCSYDNTIKVW 656 +T +GH V +LA PT P+ + S DKT ++W +GH++ V V ++ +GT LA+ G D +V IW+ + CV+ H Q + V++H +V+ S S D+T+++W Sbjct: 320 KTFKGHLLSVANLALHPTK------PILVTASDDKTWKMWHMPGGDLIMCGEGHKDWVAGVDFHPAGTCLASGGGDSAVKIWDF---EKQRCVTTFTDHKQAIWSVRFHHLGEVVASGSLDHTVRLW 437
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: PEX7_HUMAN (Peroxisomal targeting signal 2 receptor OS=Homo sapiens GN=PEX7 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 45/139 (32.37%), Postives = 67/139 (48.20%), Query Frame = 3 Query: 267 REIQTLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWNCKGHENEVKSVSW-NASGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDS 677 + + T GH ++S W P + FAS SGD+T+RIW+ A+ H+ E+ S W + LL T D S+ W++ N + V L GH ++ V++ P VL SCSYD T++ W DS Sbjct: 146 KSLCTFRGHESIIYSTIWSP-----HIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDS 277
BLAST of FC932351 vs. ExPASy Swiss-Prot
Match: NUDFA_NEUCR (Nuclear distribution protein pac-1a OS=Neurospora crassa GN=pac-1a PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 43/145 (29.66%), Postives = 72/145 (49.66%), Query Frame = 3 Query: 279 TLEGHTDRVWSLAWKPTAGVDSVAPVFASCSGDKTVRIWEQSASSRSWNCKGHENEVKSVSWNA--SGTLLATCGRDKSVWIWEVMPGNEFECVSVLQGHAQDVKMVQWHP-TMDVLFSCSYDNTIKVWWAEDTDSDNWHCVQTI 704 TL+ H D + +A+ P V AS S D+T++IW+ KGH V V + TLLA+C D ++ +W+ P + ++ + L GH V V++ P + ++L S S D T+++W D +CV+T+ Sbjct: 109 TLQSHRDPITCVAFHP------VFSSLASGSEDQTIKIWDWELGELERTIKGHTKAVLDVDYGGPRGNTLLASCSSDLTIKLWD--PLDSYKNIRTLPGHDHSVSAVRFIPGSGNLLVSASRDKTLRIW-----DVSTGYCVKTL 240 The following BLAST results are available for this feature:
BLAST of FC932351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932351 ID=FC932351; Name=FC932351; organism=Citrus clementina; type=EST; length=736bpback to top |