FC932372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 7.683e-50 Identity = 104/169 (61.54%), Postives = 124/169 (73.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHLP-DISKTADQ 730 L KLLLIGDSGVGK+C+L R KIRTIELDGKRIKLQIWDTAG+ERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++ NK D+++ KR V +G+ LA +YGIKF ETSAK N+NV F L DI D+ Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK 175
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.003e-49 Identity = 104/169 (61.54%), Postives = 124/169 (73.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHLP-DISKTADQ 730 L KLLLIGDSGVGK+C+L R KIRTIELDGKRIKLQIWDTAG+ERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++ NK D+++ KR V +G+ LA +YGIKF ETSAK N+NV F L DI D+ Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK 175
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49 Identity = 100/159 (62.89%), Postives = 121/159 (76.10%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHL 703 L KLLLIGDSGVGK+CLL R KIRTIELDGK+IKLQIWDTAG+ERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++ NK DM++ KR V +G+ LA +YGIKF ETSAK++ NV E F L Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTL 165
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49 Identity = 100/159 (62.89%), Postives = 121/159 (76.10%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHL 703 L KLLLIGDSGVGK+CLL R KIRTIELDGK+IKLQIWDTAG+ERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++ NK DM++ KR V +G+ LA +YGIKF ETSAK++ NV E F L Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTL 165
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49 Identity = 100/159 (62.89%), Postives = 121/159 (76.10%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHL 703 L KLLLIGDSGVGK+CLL R KIRTIELDGK+IKLQIWDTAG+ERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++ NK DM++ KR V +G+ LA +YGIKF ETSAK++ NV E F L Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMND-KRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTL 165
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49 Identity = 100/159 (62.89%), Postives = 121/159 (76.10%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHL 703 L KLLLIGDSGVGK+CLL R KIRTIELDGK+IKLQIWDTAG+ERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++ NK DM++ KR V +G+ LA +YGIKF ETSAK++ NV E F L Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMND-KRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTL 165
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.712e-49 Identity = 99/154 (64.29%), Postives = 117/154 (75.97%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE 688 LIKLLLIGDSGVGKSCLLLR KIRTI++ +R+KLQ+WDTAG+ERFRTITTAYYRGAMGILLVYDVTDE SFNNI NW +N++ +A++ V ILV NK D+DE KR V T +GQALAD++GI F E S+KTN+NV E Sbjct: 11 LIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDE-KRVVSTEQGQALADKFGIPFLEASSKTNINVEE 163
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.712e-49 Identity = 99/152 (65.13%), Postives = 118/152 (77.63%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGK+C+L R KIRTIELDGKRIKLQIWDTAG+ERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++ NK D+++ KR V +G+ LA +YGIKF ETSAK N+NV Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.236e-49 Identity = 99/159 (62.26%), Postives = 121/159 (76.10%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHL 703 L KLLLIGDSGVGK+CLL R KIRTIELDGK+IKLQIWDTAG+ERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++ NK DM++ KR V +G+ LA +YGIKF E SAK+++NV E F L Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMND-KRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTL 165
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.980e-49 Identity = 97/154 (62.99%), Postives = 119/154 (77.27%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE 688 L KLLLIGDSGVGK+CLL R KIRT+ELDGK+IKLQIWDTAG+ERFRTITTAYYRGAMGI+ VYD+T+E SF+NI+NWIRNIE+HAS +V ++++ NK DM+E KR V +G+ LA +YGIKF ETSAK+++NV E Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNE-KRQVSKERGEKLAIDYGIKFLETSAKSSINVEE 160 The following BLAST results are available for this feature:
BLAST of FC932372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932372 ID=FC932372; Name=FC932372; organism=Citrus clementina; type=EST; length=737bpback to top |