FC932372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 1.115e-32 Identity = 75/169 (44.38%), Postives = 103/169 (60.95%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV-GEFSFHLPDISKTADQ 730 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAG+ER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LV NK+D+ RAVPT + +A A++ G+ F ETSA + NV F L +I + Q Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ 178
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RABG2_DICDI (Ras-related protein RabG2 OS=Dictyostelium discoideum GN=rabG2 PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.115e-32 Identity = 72/154 (46.75%), Postives = 101/154 (65.58%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE 688 + K+LLIGDS VGK+ LLLR K + I +DG+ LQIWDTAG+ERFRTIT+++YRGA G+L+ YDVTD+ ++NN+R W++ I+++A V+++LV NK D+ E ++ V TS + AD GI F E SA T +NV E Sbjct: 6 VFKILLIGDSAVGKTSLLLRFADNSFQETSVNMTSVDYKNKNIVIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKCDL-EDRKLVNTSIAREYADSLGIPFMEASAATGVNVEE 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.115e-32 Identity = 70/151 (46.36%), Postives = 103/151 (68.21%), Query Frame = 2 Query: 233 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 K++L+GDSGVGK+CLL+R + + +++DG ++KLQIWDTAG+ERFR++T AYYR A +LL+YDVT+++SF++I+ W+ I++HA D+V +L+ NK D +RAV + LA +YG+ F ETSAKT LNV Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVD-SAQERAVKREDAEKLAKDYGLPFMETSAKTGLNV 214
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.901e-32 Identity = 75/169 (44.38%), Postives = 104/169 (61.54%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE-FSFHLPDISKTADQ 730 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAG+ER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA +N+ +LV NK+D+ RAVPT + +A A++ + F ETSA + NV E F L +I + Q Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ 178
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.901e-32 Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L K+++IGDSG GKS LLLR KI+T+++D IKLQIWDTAG+ERFRTIT+ YYRGA GI+ VYDVT++ SF++I W+++I+++A+ NV K+L+ NK D+ ES R V + + +A++ + + E SAKT+ NV Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAES-RVVSADEAKHVAEQNNMNYIEASAKTDSNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 139.043 bits (349), Expect = 2.483e-32 Identity = 75/169 (44.38%), Postives = 103/169 (60.95%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE-FSFHLPDISKTADQ 730 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAG+ER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LV NK+D+ RAVPT + +A A++ + F ETSA + NV E F L +I + Q Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ 178
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 2.483e-32 Identity = 75/169 (44.38%), Postives = 103/169 (60.95%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE-FSFHLPDISKTADQ 730 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAG+ER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LV NK+D+ RAVPT + +A A++ + F ETSA + NV E F L +I + Q Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ 178
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4) HSP 1 Score: 139.043 bits (349), Expect = 2.483e-32 Identity = 75/169 (44.38%), Postives = 103/169 (60.95%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE-FSFHLPDISKTADQ 730 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAG+ER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LV NK+D+ RAVPT + +A A++ + F ETSA + NV E F L +I + Q Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ 178
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 2.483e-32 Identity = 75/169 (44.38%), Postives = 103/169 (60.95%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE-FSFHLPDISKTADQ 730 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAG+ER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LV NK+D+ RAVPT + +A A++ + F ETSA + NV E F L +I + Q Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ 178
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 2.483e-32 Identity = 75/169 (44.38%), Postives = 102/169 (60.36%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV-GEFSFHLPDISKTADQ 730 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAG+ER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LV NK+D+ RAVPT + +A A++ G+ F ETSA NV F L +I + Q Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQ 178 The following BLAST results are available for this feature:
BLAST of FC932372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932372 ID=FC932372; Name=FC932372; organism=Citrus clementina; type=EST; length=737bpback to top |