FC932372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.449e-48 Identity = 101/169 (59.76%), Postives = 120/169 (71.01%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHLP-DISKTADQ 730 L KLLLIGDSGVGK+C L R KIRTIELDGKRIKLQIWDTAG+ERFRTITTAYYRGAMGI+LVYD+T+E SF NIRNW+RNIE+HAS +V K+++ NK D ++ KR V +G+ LA +GIKF ETSAK N+N+ F L DI D+ Sbjct: 8 LFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDAND-KRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDK 175
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.038e-46 Identity = 91/161 (56.52%), Postives = 117/161 (72.67%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHLPD 709 L KLLLIGDSGVGK+C+L R KI+T+EL GK+IKLQIWDTAG+ERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI+QHA+++V ++L+ NK DMD KR VP KG+ +A E+ I+FFETSAK N+N+ + LP+ Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLRNKCDMDH-KRVVPKGKGEQIAREHRIRFFETSAKANINIEKAFLTLPE 168
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.356e-46 Identity = 89/152 (58.55%), Postives = 115/152 (75.66%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGK+C+L R KI+T+EL GK+IKLQIWDTAG+ERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+ NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+ Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINI 159
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.356e-46 Identity = 89/152 (58.55%), Postives = 115/152 (75.66%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGK+C+L R KI+T+EL GK+IKLQIWDTAG+ERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+ NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+ Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINI 159
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.356e-46 Identity = 89/152 (58.55%), Postives = 115/152 (75.66%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGK+C+L R KI+T+EL GK+IKLQIWDTAG+ERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+ NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+ Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINI 159
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.356e-46 Identity = 89/152 (58.55%), Postives = 115/152 (75.66%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGK+C+L R KI+T+EL GK+IKLQIWDTAG+ERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+ NK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+ Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKVNINI 159
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.771e-46 Identity = 89/152 (58.55%), Postives = 115/152 (75.66%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGK+C+L R KI+T+EL GK+IKLQIWDTAG+ERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+ NK DM E KR VP +KG+ +A E+GI+FFETSAK N+N+ Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANINI 159
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 184.882 bits (468), Expect = 3.946e-46 Identity = 94/152 (61.84%), Postives = 112/152 (73.68%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRT+E DGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LV NK+D+ E+ RA+P +A ADE GI F ETSAK NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTEN-RAIPYETAKAFADEIGIPFMETSAKDATNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.791e-46 Identity = 90/154 (58.44%), Postives = 118/154 (76.62%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE 688 L KLLLIGDSGVGK+CL++R KIRT+E++GKRIKLQ+WDTAG+ERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+ NK DM E+KR V + LA E+GI+FFETSAK+++NV E Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM-EAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDE 160
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.558e-45 Identity = 88/154 (57.14%), Postives = 118/154 (76.62%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE 688 L KLLLIGDSGVGK+CL++R KIRT++++GK+IKLQ+WDTAG+ERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+ NK DM E+KR V + LA E+GI+FFETSAK+++NV E Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM-EAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDE 160 The following BLAST results are available for this feature:
BLAST of FC932372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932372 ID=FC932372; Name=FC932372; organism=Citrus clementina; type=EST; length=737bpback to top |