FC932372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.404e-43 Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LV NK D+ +K+ V + + AD GI F ETSAK NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 1.404e-43 Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LV NK D+ +K+ V + + AD GI F ETSAK NV Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 161
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 1.404e-43 Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LV NK D+ +K+ V + + AD GI F ETSAK NV Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 161
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 1.404e-43 Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LV NK D+ +K+ V + + AD GI F ETSAK NV Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 161
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 1.404e-43 Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LV NK D+ +K+ V + + AD GI F ETSAK NV Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 161
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 1.404e-43 Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LV NK D+ +K+ V + + AD GI F ETSAK NV Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL-TTKKVVDYTTAKEFADSLGIPFLETSAKNATNV 161
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.394e-43 Identity = 86/159 (54.09%), Postives = 113/159 (71.07%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHL 703 ++K+LLIGDSGVGKSCLL+R KI+T++++GK++KLQ+WDTAG+ERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LV NK+DM+ R V +G+ALA E GI F E+SAK + NV E F L Sbjct: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDME--TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTL 176
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.084e-43 Identity = 86/159 (54.09%), Postives = 113/159 (71.07%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHL 703 ++K+LLIGDSGVGKSCLL+R KI+T++++GK++KLQ+WDTAG+ERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LV NK+DMD R V +G+ALA E G+ F E+SAK + NV E F L Sbjct: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSDMD--TRVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTL 176
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 6.966e-43 Identity = 88/154 (57.14%), Postives = 111/154 (72.08%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGE 688 L KLLLIGDS VGKSC LLR KIRT+E++GK +KLQIWDTAG+ERFRTIT++YYRGA GI++VYD+TD SFNN++ W+ I+++A+D+V K+LV NK D+ E+ RAV TS QA A E GI F ETSAK ++NV E Sbjct: 8 LFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAEN-RAVDTSVAQAYAQEVGIPFLETSAKESINVEE 160
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.188e-42 Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDS VGKSCLLLR KIRTIE DGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYD T+ SFNN++ W+ I+++A+++V K+L+ NK DM ESK V T G+ALADE GI F ETSAK ++NV Sbjct: 8 LFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESK-VVSTETGRALADELGIPFLETSAKDSINV 158 The following BLAST results are available for this feature:
BLAST of FC932372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932372 ID=FC932372; Name=FC932372; organism=Citrus clementina; type=EST; length=737bpback to top |